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Heatmap: Cluster_111 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
5.67 6.38 8.27 8.95 8.45 5.8 9.69 11.34 12.64 14.53 12.49 10.41 6.5 6.64 14.57 7.53 3.76 2.43 3.69 0.0 0.0 0.0 3.96 3.21 0.0 16.44 6.7 5.41 4.47 4.5 4.39 6.38
34.49 31.43 26.88 34.14 35.49 36.49 36.77 49.94 48.79 48.43 47.56 43.02 47.44 48.18 63.59 52.65 26.6 20.74 46.09 11.65 39.7 10.88 30.46 38.49 30.97 72.59 51.14 50.38 32.01 32.7 29.22 25.24
8.04 9.76 11.15 11.3 8.78 8.04 9.76 13.35 14.58 15.92 13.95 12.57 8.37 14.73 29.78 8.46 4.28 1.77 4.67 0.51 0.52 3.69 2.47 2.61 1.88 13.76 5.73 4.64 4.12 4.43 7.6 8.22
34.58 40.91 37.82 41.37 39.8 38.37 36.69 41.78 34.99 43.16 36.12 36.21 27.34 30.86 38.52 38.66 24.88 15.88 55.13 16.36 35.09 8.58 34.0 39.53 43.35 47.18 46.43 51.15 32.3 32.87 35.1 26.41
13.3 14.64 18.88 17.87 15.17 12.87 16.01 21.54 22.27 29.21 23.28 22.65 13.91 19.36 34.2 12.72 5.97 2.18 7.86 1.71 0.45 2.46 3.81 3.75 1.09 38.46 13.15 10.68 6.01 5.87 14.14 14.65
41.96 39.83 24.11 29.19 40.17 33.76 46.43 37.03 47.22 42.91 52.13 47.09 32.26 47.86 36.45 34.38 22.89 10.51 39.12 12.26 67.01 31.67 42.58 41.64 51.08 56.32 32.97 28.23 22.8 28.58 24.66 30.82
179.74 180.66 212.06 251.5 257.99 233.63 233.89 313.18 265.13 296.14 298.21 223.32 269.34 451.84 448.91 380.38 136.3 100.79 282.08 96.09 57.48 39.44 312.74 335.89 139.92 497.36 176.13 172.31 183.72 185.09 186.15 135.52
4.94 6.16 7.74 6.99 7.73 5.99 7.05 7.35 8.06 10.66 9.34 6.32 8.37 6.6 13.25 8.73 5.03 5.25 5.2 0.0 0.0 0.0 5.25 5.13 0.0 13.53 4.75 5.58 5.18 6.24 5.14 7.08
44.51 44.7 48.51 53.26 51.74 49.72 53.45 65.58 71.69 86.06 84.05 76.85 43.93 67.51 78.65 44.01 27.03 19.4 33.33 16.48 25.21 6.47 32.53 34.7 22.9 81.46 41.12 46.26 27.86 28.95 34.1 36.58
361.73 320.98 278.4 333.33 371.57 350.9 395.21 433.44 404.2 392.19 360.67 360.85 319.06 238.21 560.47 373.6 283.21 219.11 376.42 163.3 191.75 65.6 323.02 322.38 581.94 545.2 369.95 355.65 320.91 335.01 286.24 287.63
19.83 16.87 17.76 18.0 20.92 22.53 20.83 20.72 23.18 25.79 21.9 20.19 17.59 18.2 27.01 20.16 18.96 13.65 20.13 7.06 20.54 10.32 20.02 20.18 23.22 20.24 22.07 22.38 17.34 18.14 18.47 21.45
38.54 37.19 37.12 39.85 40.51 38.66 40.26 48.04 54.63 57.24 54.19 53.51 41.26 50.43 60.52 45.34 28.72 23.26 34.45 38.12 31.51 26.9 29.74 32.13 51.3 86.09 47.58 47.65 28.38 30.89 34.26 40.63
43.46 44.23 46.78 50.57 55.59 59.18 65.41 80.38 75.24 80.74 85.08 75.26 67.39 92.16 121.96 65.59 32.85 36.13 55.92 52.2 21.67 19.7 50.45 68.25 28.78 176.72 65.49 62.96 37.29 40.7 36.09 36.84
47.32 43.97 44.06 45.27 47.94 42.01 45.88 53.31 56.24 54.99 53.97 52.09 48.86 49.56 63.23 51.7 25.74 22.37 41.36 10.29 36.37 28.98 36.1 41.22 43.08 87.73 56.81 56.06 27.64 29.0 34.23 37.13
22.9 19.16 18.54 21.0 20.19 18.66 28.23 27.25 25.77 27.16 26.85 26.24 9.75 14.12 29.18 16.64 15.96 19.44 24.36 21.07 20.62 5.4 14.93 15.76 23.19 15.86 27.78 25.24 15.54 16.97 11.33 12.0
61.28 62.4 59.71 68.3 69.14 69.12 63.74 72.88 70.15 70.27 69.22 69.57 50.45 73.12 50.91 78.12 36.33 24.73 65.72 11.91 32.71 11.48 40.27 45.4 73.12 87.24 97.84 88.12 44.65 46.89 38.01 36.81
22.24 24.2 32.27 41.67 31.71 31.87 59.25 104.96 72.9 109.9 92.2 73.93 69.79 84.66 115.96 59.87 22.78 24.38 38.39 19.32 7.17 21.45 22.09 25.33 23.41 118.5 21.03 16.6 25.95 25.21 38.14 41.42
46.05 41.42 41.07 45.49 44.87 46.84 64.32 81.88 78.33 77.49 72.08 59.53 66.87 52.94 100.56 75.46 42.31 31.0 78.23 20.24 29.76 31.21 62.29 93.87 64.5 115.43 62.07 65.12 53.07 62.39 43.61 43.93
22.87 20.15 18.48 22.13 21.25 23.68 33.19 38.51 34.47 33.2 25.47 26.49 15.18 28.18 38.09 23.06 11.84 5.71 29.9 12.5 30.71 5.88 12.33 17.96 36.27 31.51 33.32 28.06 17.57 19.74 28.5 24.16
54.34 54.76 54.7 61.01 68.15 66.46 66.23 95.09 89.37 91.93 85.22 70.63 71.96 48.88 55.58 72.32 30.37 22.49 51.57 20.41 16.29 22.47 50.33 57.0 58.14 120.01 74.71 75.29 42.65 42.89 40.06 45.33
61.4 58.33 61.09 72.53 68.08 66.77 65.52 85.12 82.54 85.54 86.7 69.16 81.58 148.41 101.69 93.42 36.15 28.59 69.42 76.03 22.59 15.35 52.85 57.85 62.42 129.91 69.24 62.55 40.75 40.59 46.21 57.03
70.39 51.27 46.03 48.45 51.14 48.47 48.99 74.04 88.21 89.59 89.9 79.4 96.23 88.91 131.66 68.86 32.24 30.34 52.34 37.51 45.37 31.42 42.04 58.07 42.69 149.59 58.94 53.87 44.37 46.22 48.37 53.81
78.4 79.25 81.12 79.42 86.81 78.6 94.58 93.97 91.47 93.4 89.46 86.03 76.12 95.71 106.05 84.91 58.57 45.45 79.1 65.39 67.03 45.37 63.96 70.15 83.87 108.27 86.42 86.4 60.16 65.47 62.8 57.0
3.72 2.6 2.88 3.31 2.63 2.94 3.74 8.06 6.97 9.24 7.35 7.29 7.26 2.97 6.83 4.75 1.91 2.26 6.94 4.26 10.8 0.9 1.75 1.75 2.42 8.41 5.91 5.74 2.27 2.25 0.78 0.73
16.47 17.62 14.65 17.21 22.64 24.65 27.13 28.71 31.3 24.89 23.99 24.26 20.11 18.56 36.38 19.42 25.92 23.98 20.35 0.86 16.74 3.4 24.5 28.51 43.88 35.62 28.76 20.94 25.37 21.8 27.03 22.54
32.3 26.9 32.42 28.18 29.86 29.26 33.8 41.86 35.12 39.5 36.32 35.2 24.9 34.03 49.38 31.29 24.42 9.66 42.94 18.83 52.74 10.87 28.69 31.72 51.4 58.23 46.77 40.37 28.1 27.99 25.67 25.2
32.3 26.9 32.42 28.18 29.86 29.26 33.8 41.86 35.12 39.5 36.32 35.2 24.9 34.03 49.38 31.29 24.42 9.66 42.94 18.83 52.74 10.87 28.69 31.72 51.4 58.23 46.77 40.37 28.1 27.99 25.67 25.2
8.14 8.55 6.84 6.98 7.05 6.76 7.07 7.04 8.45 9.83 9.83 8.3 2.89 6.62 9.03 3.65 6.63 10.17 6.18 9.99 14.75 1.81 8.1 7.21 18.21 6.83 10.93 9.99 4.69 5.28 6.87 7.83
28.36 31.54 36.03 39.7 42.27 40.3 43.71 45.73 48.04 45.19 44.7 37.8 36.08 46.11 53.58 42.21 36.0 44.18 59.39 25.31 22.56 26.68 58.9 49.61 48.68 75.93 44.23 47.18 38.64 42.52 35.65 41.68
14.99 14.69 14.8 17.27 17.4 19.1 23.45 22.0 26.16 31.06 24.99 23.71 14.64 32.43 35.99 14.28 11.8 5.52 8.34 3.7 29.38 2.68 7.99 10.2 13.0 46.63 18.58 21.36 12.8 13.26 8.22 7.86
2.39 1.86 2.2 2.57 2.45 2.46 2.79 3.09 3.75 3.59 3.63 2.96 1.84 2.55 7.01 2.24 1.93 1.19 2.26 0.15 1.35 1.86 1.13 0.99 0.78 3.97 3.47 3.9 1.58 1.78 1.79 2.45
1.77 0.94 1.71 1.0 0.71 0.93 0.88 1.29 1.72 2.35 1.86 2.42 0.11 2.87 0.19 0.34 0.39 3.83 1.76 3.33 4.44 0.0 0.52 0.5 1.85 3.01 1.53 1.89 1.45 1.05 1.52 2.02
15.04 10.4 11.81 15.17 14.24 18.45 23.81 31.58 31.92 35.41 34.84 24.29 25.31 28.14 30.28 25.04 9.3 9.27 26.4 19.99 13.84 8.05 16.0 19.01 11.53 44.5 21.57 19.04 14.09 14.31 19.38 24.07
36.74 31.17 32.73 38.6 46.4 54.87 57.38 64.42 58.27 65.18 62.99 40.24 55.76 87.97 81.66 57.11 24.44 8.24 42.83 8.41 18.91 37.8 37.82 40.73 30.0 135.26 77.21 70.25 25.23 27.85 29.31 33.2
39.89 46.28 53.79 50.42 53.03 52.16 54.41 61.83 61.29 62.66 69.43 50.72 70.84 75.0 102.99 77.26 35.24 35.55 48.97 21.91 12.05 5.89 55.99 61.03 21.76 113.65 57.61 71.57 37.95 45.92 30.62 32.26
21.57 20.56 19.78 21.23 18.98 20.26 24.02 26.38 26.97 29.67 25.25 22.68 12.85 21.23 23.24 16.48 9.78 8.27 17.5 7.26 3.43 3.54 11.67 13.41 17.58 46.1 31.66 29.7 13.74 14.5 17.1 16.67
6.29 6.79 7.48 6.52 8.73 7.9 8.76 9.38 10.41 11.65 9.72 9.33 9.21 10.02 8.33 9.62 5.78 0.75 9.22 2.69 14.2 0.6 6.59 7.77 13.81 13.72 10.69 13.3 6.83 8.01 6.32 6.37
58.27 52.12 59.13 67.09 70.17 66.7 73.1 88.77 94.3 100.0 88.44 75.91 96.0 138.2 128.33 91.11 39.47 27.42 68.48 38.4 30.14 1.98 61.93 74.0 29.19 175.06 82.57 83.3 38.98 43.61 43.19 45.03
20.85 31.35 58.46 62.6 53.42 41.89 99.29 114.97 95.96 102.25 81.26 56.14 94.54 133.61 110.23 18.61 15.0 9.19 17.11 4.11 3.1 8.96 14.72 16.81 12.31 112.43 46.12 24.58 22.98 22.23 23.4 25.82
30.34 30.98 36.26 37.23 44.84 47.85 49.78 60.8 57.99 59.29 56.93 43.94 56.15 82.52 63.12 55.9 27.73 27.65 39.6 22.7 21.36 33.68 43.57 47.64 29.81 58.18 52.81 62.36 37.37 36.89 29.48 30.29
33.92 33.16 33.17 33.8 35.81 32.84 33.07 35.58 39.59 36.68 36.89 32.53 33.74 34.9 33.9 33.16 19.96 18.67 39.06 5.88 17.83 10.8 24.98 25.55 32.36 50.08 44.08 42.07 21.22 21.26 18.12 22.64
13.18 14.85 14.72 16.19 14.88 15.62 18.24 17.62 16.39 17.03 15.53 14.81 15.14 14.45 22.19 20.24 12.44 7.25 18.64 10.6 19.4 11.37 11.7 12.7 9.62 21.77 18.42 17.41 13.31 13.79 9.51 8.57
17.24 12.95 15.61 19.21 19.44 16.88 19.23 35.41 32.8 37.66 32.15 24.11 17.87 13.49 27.9 17.56 8.88 3.39 13.8 6.15 0.38 2.37 12.25 12.17 9.88 55.4 25.16 25.32 10.21 10.94 12.63 14.16
13.85 13.21 15.16 16.97 22.64 23.05 20.98 25.68 22.48 22.05 18.49 17.28 22.92 10.93 26.75 24.4 11.04 9.43 22.37 5.45 14.08 14.39 18.07 21.88 30.94 34.0 17.27 19.42 18.67 20.33 6.8 6.4
8.56 6.97 8.05 8.02 8.9 11.58 10.53 11.6 11.63 10.42 9.05 8.85 8.43 4.57 15.11 9.96 7.3 7.24 10.37 1.39 2.61 0.47 10.01 10.98 13.17 9.59 10.25 11.81 7.6 8.44 5.13 5.22
104.81 97.11 109.07 113.36 102.2 86.76 134.93 195.85 255.09 285.6 295.11 211.75 202.98 324.28 378.12 138.74 36.44 31.19 19.34 1.99 0.91 0.65 42.21 80.95 27.11 265.15 121.84 113.28 31.75 46.9 50.25 51.05
18.07 18.47 17.29 21.14 22.33 18.91 18.98 20.47 20.65 20.93 21.3 20.35 15.99 15.05 33.57 17.79 15.72 10.97 17.72 11.13 10.03 13.74 15.03 15.87 16.02 20.4 22.41 22.61 13.85 14.33 17.59 16.4
13.99 12.49 15.04 13.72 13.16 12.0 11.83 16.37 14.46 14.47 14.32 13.16 10.03 17.19 13.17 14.15 6.18 3.02 11.98 0.89 6.56 1.98 8.06 9.63 15.46 20.11 13.71 15.55 7.81 6.88 5.97 6.4
7.42 7.34 10.23 7.02 7.94 7.72 4.53 7.48 9.17 6.98 7.99 5.51 3.92 9.14 11.75 5.22 2.92 0.11 4.22 1.32 17.14 0.85 3.57 4.49 16.94 10.68 10.53 15.42 3.26 3.39 2.48 3.01
20.9 21.04 23.74 25.68 27.52 28.01 33.01 35.5 36.29 38.5 34.89 32.31 29.71 37.3 52.67 23.42 15.56 8.08 16.61 6.41 11.69 5.89 15.45 17.02 8.17 26.51 25.47 20.72 12.73 14.52 18.65 20.3

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)