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Heatmap: Cluster_170 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
0.15 0.09 0.35 0.35 0.39 0.48 0.39 0.28 0.34 0.19 0.18 0.1 -0.72 -0.25 0.44 -0.68 0.08 -0.75 -0.37 -0.11 -0.5 -0.67 -0.05 -0.35 -0.4 -0.36 0.41 0.59 -0.18 -0.11 -0.55 -0.48
0.01 -0.75 0.34 -0.1 0.12 0.76 0.4 0.51 1.1 0.74 0.55 0.27 -1.19 -1.52 0.7 -0.38 -0.56 -0.3 0.41 -0.07 - -0.27 -0.21 -0.3 -1.48 0.56 0.1 0.2 -0.66 -0.21 -0.71 -0.76
0.45 0.25 0.24 0.38 0.5 0.34 0.15 -0.02 -0.03 0.23 -0.01 -0.17 0.04 0.21 1.23 0.51 -0.68 -0.78 0.22 -0.37 -0.13 -0.11 -0.2 -0.18 -1.45 -0.4 -0.43 -0.2 -0.58 -0.37 -0.59 -0.68
0.39 0.33 0.09 0.31 0.13 0.58 0.14 0.18 0.34 0.37 0.29 0.2 0.3 0.41 0.46 0.35 -0.07 -0.54 -0.11 -0.14 -2.42 -2.42 0.52 0.32 -0.55 -1.24 -0.66 -0.61 -0.23 0.04 -0.49 -0.63
0.01 -0.2 -0.05 0.1 0.35 -0.21 0.14 0.82 0.79 0.81 0.54 0.36 -1.39 -1.71 -1.42 -0.83 -0.36 -0.3 -0.75 1.23 -0.69 0.08 -0.37 -0.41 0.1 0.35 0.2 0.11 0.04 0.14 -1.16 -1.49
0.44 0.35 0.44 0.24 0.2 0.38 0.53 0.56 0.68 0.63 0.57 0.34 -0.93 -1.28 -0.96 -0.73 -0.02 -0.59 0.45 -0.09 -1.31 -0.83 -0.57 -0.67 -1.24 -0.18 0.2 0.25 -0.23 -0.12 -0.05 -0.14
-0.11 -0.42 0.29 0.0 0.19 0.67 0.17 0.43 0.82 1.2 1.14 0.5 -0.31 -0.97 -0.21 -0.22 -0.25 -0.79 0.28 0.86 -0.99 -0.98 -1.18 -1.12 -2.04 -0.47 -1.24 -0.07 0.31 0.36 -1.09 -1.07
0.03 0.09 0.43 0.2 0.0 0.5 0.06 0.16 0.06 0.14 0.34 -0.09 -0.58 -2.26 -3.02 -1.77 -0.2 -0.44 -1.49 1.68 -0.36 1.04 0.57 0.47 0.34 -0.55 -0.1 -0.05 -0.28 -0.33 -1.27 -1.11
-0.63 -0.81 -1.6 -2.02 -1.34 0.91 0.16 0.71 0.98 0.82 -0.0 -0.27 -1.8 -1.64 1.15 -2.47 -0.03 -2.68 -0.2 1.29 -1.4 -0.76 -0.45 -0.36 -0.93 0.32 0.66 -0.0 0.91 0.67 0.02 -0.27
0.2 -0.0 0.12 0.29 0.24 0.31 0.46 0.38 0.61 0.35 0.29 0.11 -0.02 0.45 0.52 0.2 -0.52 -0.81 -0.38 -0.68 -1.21 -1.19 0.03 -0.01 -0.45 -0.06 0.03 0.52 -0.62 -0.25 -0.83 -0.62
0.33 0.2 0.26 0.25 0.17 0.28 0.06 0.18 0.46 0.48 0.44 0.26 -0.11 -0.15 -0.09 -0.02 -0.3 -0.71 0.32 0.22 -0.17 -1.45 -0.1 -0.09 -0.52 -0.05 -0.45 -0.17 -0.01 -0.11 -0.41 -0.44
0.69 0.49 0.2 0.33 0.27 0.03 0.04 0.24 0.29 0.52 0.62 0.6 0.24 -0.35 -0.81 0.25 -0.34 -0.74 0.04 -0.7 -1.58 -1.41 0.15 -0.03 -3.07 0.37 -0.51 -0.64 -0.13 -0.2 0.16 0.28
0.37 -0.01 0.15 -0.01 -0.03 -0.08 -0.03 0.04 0.47 0.53 0.6 0.51 -0.5 -0.47 0.1 -0.54 -0.08 -0.4 0.26 -1.08 -1.47 -3.7 0.06 0.71 -0.54 0.56 -0.08 0.27 -0.2 0.0 -0.03 0.1
0.65 0.55 0.53 0.41 0.23 0.23 0.14 0.14 0.24 0.36 0.48 0.32 0.07 -0.07 -0.16 0.16 -0.1 -0.61 0.47 -0.5 -2.13 -2.35 0.19 0.22 -1.75 0.18 -0.6 -0.42 0.12 0.19 -0.84 -0.99
0.61 0.58 0.42 0.31 0.39 0.53 0.88 0.87 0.75 0.64 0.65 0.79 -3.44 -1.2 -0.82 -2.73 -0.16 -0.02 -0.94 -0.48 -0.58 0.35 -1.29 -1.8 -1.84 -1.59 0.6 0.49 -0.5 -0.52 -0.42 -0.39
0.17 0.2 0.16 0.14 0.21 0.24 0.12 0.28 0.4 0.43 0.38 0.24 -0.22 -0.17 -0.0 -0.03 -0.15 -0.2 -0.31 0.12 -0.03 0.32 -0.01 0.03 -0.95 -0.52 -0.52 -0.48 -0.19 -0.12 -0.36 -0.19
0.34 0.17 0.03 0.01 -0.25 0.08 -0.63 -0.12 0.22 0.23 0.53 0.48 -0.96 -2.46 -2.89 -0.58 -0.57 -0.52 0.13 1.75 -0.65 0.49 0.85 0.39 -0.87 -0.05 -1.11 -1.42 -0.0 0.09 -0.18 0.2
-0.02 0.2 0.29 0.3 0.13 0.3 0.82 0.72 0.84 0.62 0.58 0.27 -0.56 0.51 0.82 -0.17 -0.35 0.0 -0.91 -0.43 -1.7 -2.13 -0.46 -0.35 -1.37 -0.45 -0.25 -0.12 -0.36 -0.08 -0.76 -0.72
0.3 0.32 0.05 0.38 0.48 0.74 0.3 -0.05 0.31 -0.11 0.13 -0.0 -1.89 -0.17 -0.18 -1.77 1.01 0.54 0.12 0.72 -1.35 0.67 -0.99 -1.58 - -1.37 -1.55 -1.01 0.17 0.59 0.33 0.27
0.4 0.0 0.04 0.02 0.0 0.12 -0.07 0.29 0.17 0.35 0.17 -0.07 0.36 0.25 1.0 0.81 -1.03 -1.58 -0.04 0.15 -1.47 0.07 -0.22 0.36 -0.56 -0.13 0.17 0.27 -0.94 -0.94 -0.78 -0.62
0.24 0.26 0.01 0.29 0.35 0.49 0.64 0.81 0.85 0.71 0.73 0.6 -4.01 -2.7 -1.37 -2.57 0.39 -0.3 0.5 -0.35 -1.02 -0.25 -0.61 -0.26 -2.34 -0.25 0.49 0.28 -0.43 -0.1 -0.14 -0.63
-0.14 0.25 0.85 0.6 0.65 0.57 0.91 0.38 0.65 0.88 0.92 0.46 -1.66 -1.88 0.77 -0.65 -0.18 -1.17 -1.1 0.74 -1.79 0.41 -1.53 -1.21 -3.97 0.18 -0.56 -0.5 -0.6 -0.26 -1.14 -1.5
0.27 0.46 0.6 0.43 0.32 0.33 1.04 0.6 0.75 0.69 0.76 0.59 -0.98 0.8 1.15 -1.12 0.68 -0.45 -2.21 -3.1 -3.86 -1.86 -1.18 -1.01 -0.8 -0.98 -0.92 -0.4 -0.01 0.12 -1.19 -2.15
0.9 0.33 -0.5 0.3 -0.48 -0.09 0.16 -0.69 0.65 0.09 0.74 -0.12 0.3 0.67 2.39 1.13 -0.93 -3.36 0.13 0.45 - - -0.19 0.01 - 0.53 -1.43 -1.53 -2.01 -0.96 -3.5 -3.24
0.24 0.83 0.31 -0.21 -1.1 -0.29 -0.59 -1.03 -0.24 -0.11 0.08 0.7 -4.26 -4.58 -2.76 -4.45 1.96 2.01 -1.36 1.76 -1.19 0.46 -0.28 -0.45 -1.86 -3.08 -2.77 -2.91 0.45 0.3 -0.33 -0.7
0.19 0.06 0.15 0.09 -0.07 0.09 0.54 0.4 0.44 0.72 0.51 0.32 -0.28 -1.08 -0.38 -0.21 -0.68 -0.82 -0.1 -0.46 -0.38 0.1 -0.59 -0.73 -0.98 0.87 0.21 0.1 -0.37 -0.39 0.1 0.18
-0.07 0.62 0.6 0.92 0.52 0.67 1.04 0.98 1.07 0.91 0.77 0.55 -5.28 -4.47 -5.98 -2.95 -0.28 -0.86 -1.22 0.54 -1.3 -1.58 -0.24 -0.81 -2.47 0.72 -0.69 -0.24 -0.41 -0.06 -0.54 -0.81
0.08 0.39 0.3 0.36 0.41 0.42 0.2 0.28 0.41 0.5 0.51 0.23 -0.17 -0.29 0.1 -0.15 0.29 -1.31 -0.34 -0.17 -1.08 -0.31 0.1 0.08 -1.4 -0.28 -0.31 -0.16 0.04 0.18 -0.6 -0.65
0.36 0.31 -0.05 0.47 0.63 0.57 0.52 0.72 1.06 0.74 0.9 0.68 -1.81 -1.13 0.52 -1.84 -1.42 -3.93 -2.41 1.62 -2.29 0.58 -1.48 -1.17 0.53 0.15 -0.32 0.0 -2.07 -2.23 -2.44 -2.78
0.25 0.21 0.2 0.31 0.18 0.04 0.37 0.35 0.74 0.72 0.72 0.62 -0.01 0.85 1.17 -0.06 0.0 -0.31 -1.67 -1.26 -3.51 -0.77 -0.52 -0.37 -2.34 -0.39 -1.0 -0.98 -0.6 -0.4 -0.08 0.03
0.34 0.14 -0.02 0.26 0.76 0.38 0.24 0.26 0.5 0.54 0.57 0.29 0.29 0.05 0.08 0.23 -0.26 -0.44 0.29 -0.65 -1.01 -2.23 -0.12 -0.38 -0.33 0.2 -0.27 -0.37 -0.49 -0.32 -0.84 -0.82
0.21 0.26 0.47 0.41 0.39 0.48 0.52 0.33 0.58 0.45 0.45 0.15 -0.53 -0.14 0.61 -0.41 -0.04 -0.41 -0.26 -0.03 -2.15 -1.02 -0.12 -0.14 -1.87 -0.42 -0.2 0.04 -0.1 0.09 -0.56 -0.64
-0.13 -0.29 -0.16 -0.37 -0.0 -0.1 0.37 0.67 0.65 0.8 0.67 0.44 -1.86 -1.91 -0.8 -1.23 -0.55 -0.38 -0.35 1.53 0.61 1.18 -0.88 -0.75 -0.99 -0.16 -0.3 -0.6 -0.34 -0.42 -0.51 -0.28
0.37 -0.25 0.24 0.33 0.05 0.15 0.25 0.66 0.73 0.74 0.85 0.63 -0.04 -0.28 0.01 -0.53 -1.17 -1.47 -0.92 1.01 -0.78 0.34 -0.65 -0.23 -1.54 0.33 -0.29 -0.29 -0.77 -0.94 -0.72 -0.53
-0.18 -0.39 -0.1 -0.02 -0.11 0.14 0.26 0.48 0.56 0.32 0.45 0.21 -1.51 -1.52 -1.28 -1.31 0.1 0.51 -0.65 1.21 -0.08 0.39 -0.36 -0.56 -1.65 -0.22 0.5 0.51 0.09 0.07 -0.17 -0.18
0.68 0.53 0.23 0.36 0.31 0.5 0.13 -0.15 0.0 0.03 0.01 -0.03 0.18 0.7 1.27 0.32 -0.44 -0.29 -0.14 -0.06 -1.8 -0.44 -0.27 -0.32 -1.05 -0.46 -0.36 -0.46 -0.62 -0.42 -0.66 -0.7
0.63 1.23 0.78 0.41 0.07 0.39 0.54 -0.12 0.08 0.11 0.1 0.3 -6.27 -4.44 -3.14 -5.23 0.93 0.67 -1.06 1.96 -1.86 0.94 -0.57 -1.03 -0.73 -2.39 -2.14 -1.48 -0.12 0.15 -0.3 -2.0
-0.09 0.1 -0.05 0.2 0.49 0.59 0.56 0.1 0.53 0.48 0.3 0.27 -1.28 -2.01 -2.0 -0.65 0.81 0.18 -0.38 1.26 0.2 0.31 -0.66 -0.67 -2.53 -1.25 -1.32 -1.05 0.34 0.33 0.04 -0.21
0.32 0.51 0.62 0.61 0.47 0.96 0.79 0.46 0.78 0.55 0.66 0.38 -4.39 -4.23 -2.02 -3.67 0.24 -0.21 -1.88 1.58 -1.24 1.24 -1.73 -2.36 -2.5 -1.64 -0.92 -0.67 -0.44 -0.32 -0.16 -0.62
0.16 0.32 0.31 0.24 0.08 0.21 0.98 0.7 0.89 0.95 0.79 0.59 -0.91 0.99 0.99 -0.58 -0.13 -0.77 -1.39 -2.43 -3.14 -1.98 -0.74 -0.23 -2.46 -0.22 -0.66 -0.62 -0.46 -0.3 -0.25 -0.64
0.03 0.24 0.22 0.49 0.78 0.76 0.92 0.88 0.61 0.63 0.34 0.2 -0.25 -0.57 -0.18 0.18 -0.31 -0.72 -0.1 -0.28 - -2.12 0.07 0.11 -2.73 -0.61 0.09 -0.24 -0.26 -0.17 -0.85 -0.88
-0.3 -0.28 0.02 -0.03 -0.11 0.03 0.26 0.04 0.56 0.69 0.55 0.3 -0.47 -0.93 0.72 -0.07 -0.49 -0.42 0.25 0.5 -1.63 0.67 -0.04 -0.03 0.15 0.09 -0.48 -0.32 -0.32 -0.2 -0.72 -0.59
-0.78 -1.06 -0.87 -0.41 -0.43 0.05 0.12 0.37 0.39 0.28 0.08 -0.01 -1.58 -0.82 -0.09 -0.91 0.52 0.17 -0.05 1.02 0.07 0.47 -0.09 -0.13 -0.9 -1.23 0.01 -0.01 0.84 0.76 0.41 -0.11
0.08 0.03 0.3 0.33 0.28 0.54 0.45 0.35 0.71 0.72 0.62 0.34 -0.33 0.69 1.23 -0.07 -0.39 -1.25 -1.31 -1.16 -3.61 -0.42 -0.58 -0.27 -0.84 0.0 -0.49 -0.26 -0.38 -0.29 -0.54 -0.78
0.02 -0.29 -0.19 -0.31 0.38 0.78 0.6 0.66 0.73 0.61 -0.04 -0.13 -0.64 -1.5 0.23 -0.35 -0.21 -0.02 -0.09 0.81 -1.72 0.52 0.07 -0.01 -1.36 -0.8 -0.47 -0.3 -0.04 0.16 -0.34 -0.66
0.38 0.28 0.35 0.33 0.35 0.43 0.27 0.29 0.28 0.38 0.43 0.24 0.02 0.25 0.27 0.28 -0.27 -0.43 0.03 -0.01 -1.66 -0.17 -0.0 0.04 -1.67 -0.8 -0.72 -0.56 -0.24 -0.04 -0.45 -0.47
0.46 0.65 0.92 0.57 0.63 0.62 0.8 0.46 0.99 0.89 0.97 0.78 -1.97 -2.05 -1.67 -1.46 0.19 -1.06 0.49 0.12 -2.22 -1.44 -1.68 -2.02 -2.42 0.19 -0.78 -0.45 -0.58 -0.23 -0.4 -0.74
0.29 0.49 0.2 0.21 0.99 0.56 0.15 0.49 1.23 0.8 -0.19 0.02 -1.28 -3.14 0.11 -2.56 0.11 -1.23 -1.63 1.67 -1.88 1.6 -1.09 -0.81 -0.34 -0.31 -1.58 - -0.2 -0.56 -2.27 -1.68
0.31 0.36 0.38 0.27 0.43 0.39 0.47 0.37 0.42 0.39 0.39 0.15 0.13 0.37 0.53 0.19 -0.35 -0.39 -0.28 -0.17 -1.29 -1.08 0.01 -0.13 -1.03 -0.46 -0.77 -0.52 -0.25 -0.14 -0.65 -0.62
0.49 0.62 0.69 0.54 0.52 0.52 0.41 0.17 0.6 0.37 0.32 0.19 -3.27 -3.76 -0.12 -2.41 0.07 -0.42 -0.27 1.68 -1.15 1.58 -3.03 -4.91 -1.75 -0.48 -0.76 -0.62 -0.52 0.06 -1.11 -1.63
0.2 -0.05 -0.05 0.08 0.08 0.11 -0.16 0.4 0.63 0.53 0.62 0.54 -0.1 0.08 -0.1 0.06 -0.89 -0.87 -0.08 -0.06 -1.3 -0.84 -0.33 -0.05 -1.97 0.84 0.53 0.41 -0.68 -0.71 -0.28 -0.03
0.45 -0.16 0.24 0.17 0.65 0.43 0.43 0.89 0.91 0.64 1.07 0.47 -1.1 -0.57 -0.3 -1.02 -0.43 -0.49 -0.52 -0.36 -0.24 -6.08 -0.18 -0.45 -3.99 -0.09 -0.11 0.25 -0.38 -0.28 -0.3 0.04
0.07 0.12 0.09 0.19 0.13 0.24 0.3 0.4 0.5 0.55 0.3 0.34 0.02 -0.47 -0.28 0.01 -0.35 -0.65 -0.1 -0.23 -1.13 0.06 -0.17 -0.12 -1.35 0.53 0.03 0.12 -0.31 -0.31 -0.16 -0.13
0.28 0.29 0.49 0.46 0.72 0.55 0.46 0.35 0.59 0.6 0.43 0.26 -1.46 -3.46 -3.89 -2.69 -0.15 -1.43 -2.33 1.22 -1.19 1.29 0.45 0.56 0.15 -1.55 -0.27 -0.55 -0.5 -0.43 -1.11 -1.39
0.35 0.39 0.27 0.34 0.22 0.22 0.03 0.13 0.38 0.54 0.37 0.42 -0.3 -0.02 -0.35 -0.59 0.13 -0.71 0.19 -0.95 -1.11 -2.48 0.51 0.38 0.13 -0.0 -0.52 -0.32 -0.01 0.09 -0.41 -0.45
-0.14 0.19 0.4 0.59 0.53 0.67 0.58 0.37 0.51 0.45 0.31 0.1 -1.14 -1.01 -0.17 -1.14 -0.16 -0.36 -0.86 -0.18 -1.29 -0.09 0.12 -0.14 -2.51 0.03 0.81 0.91 -0.86 -0.67 -0.54 -0.42
0.14 0.49 0.47 0.34 0.16 0.29 0.35 -0.01 0.57 0.49 0.34 0.05 -4.13 -1.67 -2.65 -2.93 0.49 0.3 -1.09 2.24 -1.82 1.05 -0.43 0.26 -2.99 -1.02 -1.72 -1.54 -0.24 0.12 -0.75 -1.19
-0.36 0.16 0.15 0.06 -0.17 -0.04 -0.01 0.12 0.69 0.6 0.31 0.11 -0.51 -0.74 0.9 -0.18 0.22 0.06 0.27 0.76 0.42 1.26 -0.85 -0.45 -1.59 -1.07 -1.85 -1.98 -0.0 0.1 -0.97 -1.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.