Heatmap: Cluster_178 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
-0.53 -0.78 -0.03 -0.23 -0.14 0.24 -0.02 -0.04 -0.59 -0.46 -0.53 -1.0 -0.32 -0.49 1.53 0.04 -0.57 -1.74 0.2 0.7 0.62 0.96 -0.17 0.06 -0.56 0.48 0.83 0.48 -0.67 -0.63 -0.83 -0.75
-1.87 -1.03 -1.16 -1.11 0.19 -0.09 -0.12 -0.64 -0.9 -0.59 -2.14 -1.55 -0.94 -0.81 1.42 -0.97 -0.23 0.61 -0.19 1.47 -1.33 1.17 0.23 0.46 1.43 -1.31 0.72 1.0 -0.2 0.06 -1.06 -1.93
-0.86 -0.86 -1.04 -0.92 -0.81 -0.69 -0.58 -0.34 -0.6 -0.49 -0.74 -0.69 -0.2 -0.17 1.11 -0.2 -0.73 -0.73 -0.38 1.59 0.77 1.29 -0.72 -0.43 1.07 0.81 0.43 0.35 -0.74 -0.66 -0.38 -0.16
-0.37 -1.25 -1.02 -0.39 -0.08 -0.15 0.03 -0.37 -0.12 -0.34 -0.56 -0.64 0.27 0.96 1.97 1.04 -0.75 -0.02 -1.03 -0.32 - 1.24 0.49 0.76 -3.98 0.17 0.26 0.31 -1.32 -0.57 -1.57 -1.32
-0.59 -0.71 -0.2 -0.66 -0.57 -0.09 -0.35 -0.26 -0.13 -0.53 -0.7 -0.94 0.49 0.05 0.85 0.71 -0.47 0.26 0.17 0.89 0.3 0.05 0.05 0.32 0.09 -0.1 0.56 0.27 -0.52 -0.46 -0.27 -0.02
-1.77 -1.79 - - - - - -1.96 -1.49 - - - - 1.37 3.0 -1.77 - -1.23 - 1.2 - 3.14 -1.78 - 1.21 1.97 0.69 - - - - -1.96
0.15 0.4 0.08 0.3 0.23 0.14 -0.12 -0.06 0.09 -0.1 0.03 -0.09 -0.07 1.0 0.91 0.39 -0.27 -0.04 -0.3 -0.27 -0.68 0.76 0.13 0.08 -0.23 -1.01 -0.65 -0.74 -0.82 -0.73 -0.6 -0.47
-0.47 -0.54 -0.43 -0.39 -0.68 -0.36 -0.7 -0.63 -0.34 -0.75 -0.7 -0.61 0.43 1.16 1.32 0.53 -0.38 -0.08 0.12 -1.43 0.31 1.1 -0.05 -0.0 0.4 0.19 0.18 0.01 -0.37 -0.34 -0.46 -0.25
-0.38 -0.52 -0.51 -0.42 -0.22 -0.44 -0.37 -0.36 -0.21 -0.27 -0.12 -0.36 0.2 0.53 0.99 0.36 -0.35 -0.94 -0.02 0.39 0.19 0.31 -0.24 -0.2 -0.28 0.74 0.25 0.43 -0.26 -0.26 0.15 0.24
-0.51 -0.61 -0.76 -0.39 -0.44 -0.24 -0.31 -0.05 0.05 0.33 0.15 0.12 0.26 0.57 0.65 0.17 -0.42 -0.65 -0.17 0.33 0.25 0.64 0.03 0.29 0.74 0.21 -0.65 -0.49 -0.21 -0.09 -0.35 -0.34
-0.4 -0.39 -0.18 -0.24 0.14 0.22 0.27 0.24 -0.12 -0.46 -0.38 -0.61 -0.76 -0.19 1.64 -0.6 -0.56 -1.37 -0.59 1.1 -0.28 1.86 -1.08 -0.94 -0.74 0.01 0.52 0.31 -0.97 -0.95 -0.74 -0.84
-0.38 -0.29 -0.36 -0.31 -0.3 -0.23 -0.24 -0.29 -0.27 -0.2 -0.41 -0.35 0.34 0.43 1.09 0.41 -0.1 -0.11 0.29 0.03 0.21 0.54 0.24 0.34 0.44 -0.87 -0.93 -1.06 -0.12 -0.13 0.07 0.29
-0.88 -0.98 -0.98 -0.74 -0.81 -0.57 -0.8 -0.79 -0.78 -0.88 -0.97 -0.94 0.45 1.04 1.65 0.7 -0.12 -0.45 0.48 0.51 -0.15 1.14 0.2 0.45 0.56 -0.04 -0.92 -0.57 -0.24 -0.22 -0.26 -0.27
-0.49 -0.65 -0.56 -0.44 -0.43 -0.42 -0.53 -0.54 -0.54 -0.6 -0.7 -0.72 -0.02 1.03 1.46 0.1 -0.57 -0.51 0.04 1.27 0.03 1.67 -0.37 -0.2 0.66 -0.4 -0.46 -0.36 -0.63 -0.5 -0.91 -0.91
0.23 0.25 0.22 0.31 0.19 0.44 0.04 -0.04 -0.03 -0.07 0.23 -0.07 0.0 1.12 0.91 -0.38 -0.59 0.59 -0.57 0.13 -0.71 1.04 -0.56 -0.54 -0.97 -1.6 -0.69 -1.03 -0.77 -0.84 -0.41 0.05
-0.28 -0.09 -0.06 -0.04 -0.2 0.05 -0.09 -0.0 -0.14 -0.24 -0.1 -0.5 0.31 0.28 0.79 0.4 -0.66 -1.27 -0.25 0.23 -0.7 1.17 -0.16 0.06 0.51 -0.2 0.19 0.19 -0.71 -0.59 -0.23 0.02
-0.56 -0.8 -0.98 -0.62 -0.61 -0.56 -0.52 -0.28 -0.55 -0.47 -0.55 -0.67 0.5 -0.53 1.07 0.32 -0.66 -0.09 -0.08 0.12 0.59 0.78 0.22 0.65 0.53 1.04 0.36 0.08 -0.32 -0.24 -0.39 -0.39
-0.84 -1.3 -1.6 -0.53 -0.4 -0.33 -0.13 -0.36 0.17 -0.2 -0.7 -0.99 -0.85 -1.21 2.77 -0.52 -0.42 -2.4 -1.38 1.46 0.3 2.52 -1.58 -0.73 -0.51 -2.84 -1.66 -1.5 -1.07 -1.04 -1.49 -1.62
-5.16 - - - - - -3.23 -5.3 -1.63 -5.07 -2.33 -4.01 -4.88 -0.33 2.25 - - -5.07 -5.06 2.34 1.41 2.75 - -5.11 1.95 0.75 1.58 1.33 -5.2 -5.04 - -
-1.0 -0.41 -0.84 -0.42 0.22 0.21 -0.46 0.2 -0.58 -0.84 -1.05 -1.17 0.08 0.38 1.4 -0.16 -1.04 -0.27 0.14 1.19 -0.82 1.3 -0.24 -0.0 0.54 -0.1 0.77 0.81 -0.81 -0.67 -1.78 -1.69
-0.97 -0.87 -1.29 -0.8 -0.01 -0.81 -1.34 -1.14 -1.28 -1.26 -1.25 -1.06 0.95 0.83 0.65 0.71 -0.71 -0.36 0.39 0.63 1.13 0.52 0.34 0.45 1.33 -0.46 0.26 -0.49 -0.39 -0.55 -0.59 0.17
-0.25 -0.06 0.13 -0.17 0.24 0.29 0.02 -0.61 -0.31 -0.55 -0.14 -0.82 -1.73 -4.06 2.29 -0.65 -0.12 -1.29 -1.56 1.81 -0.02 2.36 -2.75 -3.14 -2.49 -1.65 -0.57 -0.09 -0.84 -0.42 -2.04 -3.62
-0.58 -3.87 - -2.2 -3.67 -1.44 -0.88 -4.13 -0.47 -0.68 -1.17 -3.95 0.46 -0.2 2.01 1.06 -0.25 -3.55 2.34 1.42 -1.42 2.87 -1.77 -2.84 - -1.09 -1.4 -0.49 -0.99 -1.16 -2.77 -1.51
-0.9 -0.79 -0.69 -0.48 -0.2 0.07 -0.14 -0.32 -0.54 -1.04 -0.73 -0.98 -0.07 -0.54 1.33 -0.32 -0.44 -1.1 -0.29 1.09 0.22 1.81 -0.54 -0.69 0.4 0.03 0.8 1.21 -0.71 -0.52 -1.08 -1.35
-0.81 -0.71 -0.7 -0.63 -0.82 -0.58 -0.6 -1.01 -0.85 -1.24 -0.79 -0.93 -1.0 -1.17 2.44 -0.77 -0.69 -4.39 -0.82 2.02 0.56 2.47 -1.95 -1.66 0.44 -0.1 -0.58 -0.52 -1.05 -0.77 -1.8 -2.17
-0.3 -0.18 -0.16 -0.03 -0.24 0.07 0.02 -0.48 -0.3 -0.64 -0.18 -0.33 -1.36 -3.25 2.28 -0.84 0.05 -1.02 -0.56 2.28 -0.61 2.1 -3.35 -3.6 -2.41 -1.18 -0.66 -0.49 -1.09 -0.69 -1.92 -2.02
-0.08 -0.13 -0.29 0.12 0.27 0.39 0.32 0.07 -0.13 -0.38 -0.13 -0.51 0.07 0.31 0.89 -0.25 -0.57 -1.6 -0.53 1.03 -0.77 0.88 -0.15 -0.32 -0.11 0.07 0.61 0.82 -0.75 -0.76 -1.3 -1.18
-0.09 -0.18 -0.29 -0.05 -0.32 -0.17 -0.2 0.06 0.25 0.39 0.16 0.06 0.36 -0.01 0.86 -0.1 -0.64 -1.0 0.19 1.0 -1.14 0.72 -0.05 -0.13 -0.14 0.5 0.08 -0.16 -0.5 -0.47 -1.0 -0.65
-0.32 -0.49 -2.19 0.03 - -0.73 -0.07 - -0.7 0.21 -2.18 -1.97 - - -1.36 - - 2.52 - 1.2 1.67 2.89 -2.2 -2.14 2.35 - -0.28 - - - - -
-0.8 -1.31 -0.94 -0.7 -0.16 -0.43 -0.62 -0.85 -0.47 -0.78 -0.58 -1.19 -0.72 -1.25 2.81 0.32 -0.07 -0.71 -1.38 -2.73 -0.13 3.11 -2.17 -2.21 -2.1 -2.33 -1.13 -0.67 -1.07 -0.97 -1.47 -1.38
-1.22 -0.02 -0.77 -0.41 -0.31 0.15 -0.24 -0.9 0.07 -0.25 -0.67 -0.43 -0.46 -0.32 1.85 -0.13 -0.74 -1.79 -0.21 0.78 0.53 2.15 -0.97 -1.83 0.87 0.37 0.03 -0.33 -0.77 -0.69 -2.32 -2.87
-0.06 -0.3 -0.76 -0.24 -0.35 -0.21 -0.16 -0.29 -0.25 -0.18 -0.37 -0.04 0.39 0.65 1.28 0.22 0.09 0.42 0.02 -0.01 -0.31 0.61 -0.02 -0.02 0.18 -1.27 -1.21 -1.3 0.05 -0.02 0.16 0.32
-1.02 -0.71 -0.28 -0.38 0.04 -0.44 -0.03 -1.11 0.23 -0.78 -0.07 -1.21 -0.91 -1.45 2.27 -0.73 -0.66 -2.82 -0.2 1.59 -0.61 3.22 -3.52 -3.67 -2.69 -3.12 -2.37 -2.6 -1.53 -1.5 -1.59 -2.5
-0.46 -0.3 -0.65 -0.21 -0.22 -0.38 -0.4 -0.24 -0.56 -0.11 -0.2 0.06 0.74 -0.79 -1.19 0.62 -0.3 0.71 0.21 0.64 0.21 0.96 -0.41 -0.15 0.91 0.14 -0.31 0.11 -0.28 -0.47 -0.5 -0.08
0.06 0.58 0.2 0.09 -0.37 -0.13 -0.25 -0.31 -0.12 -0.08 -0.19 -0.15 -3.69 -1.41 -0.14 -2.15 -0.42 1.67 0.02 0.13 0.83 1.15 -0.95 -1.17 0.6 -0.26 0.78 0.73 -0.58 -0.47 -1.81 -1.85
-2.83 -2.0 -2.12 -2.31 -2.91 -2.55 -2.18 -1.84 -1.42 -2.23 -2.02 -2.01 1.28 1.4 2.42 0.21 -2.32 -2.45 0.33 2.74 -2.51 2.87 -3.06 -0.86 -2.17 -2.65 -3.29 -2.61 -2.64 -1.91 -3.25 -3.53
0.13 -0.21 -0.34 -0.24 -0.17 0.26 0.06 0.08 -0.5 -0.08 -0.33 -0.52 -0.35 -0.38 1.27 -0.19 -0.46 -0.39 -0.16 1.13 -0.6 1.74 -0.67 -0.65 -1.1 0.12 0.4 0.46 -0.79 -0.76 -1.06 -0.97
-0.77 -0.53 -1.25 -0.15 -0.38 0.16 -0.82 -0.57 -0.88 -0.71 -0.36 -0.8 0.49 -0.14 0.8 0.87 -0.43 -0.15 0.56 0.55 -0.09 1.22 0.02 0.37 0.72 -0.12 -0.11 0.03 0.2 0.2 -1.24 -1.05
-0.31 -0.24 -0.3 -0.42 -0.34 -0.45 -0.25 -0.68 -0.77 -0.65 -0.31 -0.52 0.73 0.47 1.04 1.04 -0.2 -0.46 0.42 0.07 0.63 0.99 -0.33 -0.4 0.87 0.03 -0.26 -0.6 -0.6 -0.46 -0.77 -0.91
-1.38 -1.31 -3.27 -0.88 0.13 0.7 -0.9 -0.97 -1.91 -2.04 -2.41 -2.03 0.58 0.95 2.3 1.42 -1.14 -0.95 -1.47 1.99 -1.71 2.73 -1.89 -2.1 -1.67 -5.04 -2.11 -0.81 -1.83 -1.57 -2.42 -3.12
-0.86 -0.61 -0.25 -0.26 -0.11 -0.02 0.07 -0.43 -0.03 -0.45 -0.25 -0.63 -1.24 -2.09 2.45 -0.59 0.08 -0.72 -1.31 1.69 0.21 2.0 -3.31 -3.76 -1.44 -1.32 -0.57 0.08 -0.98 -0.62 -0.77 -0.84
-0.47 -0.53 -0.5 -0.08 -0.27 0.16 -0.25 -0.01 0.06 -0.15 -0.27 -0.25 -0.05 0.26 1.01 0.02 -1.1 0.27 -0.05 1.88 0.7 1.31 -0.82 -0.16 -0.48 -1.46 -0.87 -0.75 -0.74 -0.82 -1.16 -0.72
-0.7 -0.64 -0.71 -0.83 -0.07 -0.46 -0.3 -0.45 -0.61 -0.33 -0.58 -0.76 0.02 -0.09 1.06 0.28 -0.53 -0.55 0.1 0.96 -0.25 1.1 -0.26 -0.15 0.44 0.68 0.85 0.81 -0.49 -0.47 -0.67 -0.56
-0.6 -0.55 -0.51 -0.12 0.02 0.08 -0.21 -0.43 -0.27 -0.41 -0.93 -0.8 0.02 0.36 0.62 0.74 -0.45 -0.49 0.4 0.95 0.42 0.36 -0.11 0.1 0.06 0.08 0.48 0.55 -0.44 -0.29 -0.76 -0.41
-1.65 -1.2 -0.75 -0.35 -0.25 0.18 0.4 0.26 -0.11 -0.6 -0.78 -1.29 0.15 -0.1 1.32 0.16 -0.34 -0.44 0.17 1.42 -0.41 1.53 0.09 0.48 0.39 -1.17 -0.49 -0.56 -0.29 0.05 -1.12 -1.98
-0.92 -0.84 -0.73 -0.63 -0.38 -0.54 -0.43 -0.85 -0.56 -0.71 -0.66 -0.9 0.49 0.42 1.0 0.71 -0.61 0.1 0.41 0.6 0.34 0.83 0.06 0.1 0.41 0.25 0.45 0.42 -0.41 -0.24 -0.54 -0.27
-1.03 -2.0 -1.9 -0.97 -0.5 -0.03 -0.38 -0.15 -0.21 -0.5 -0.26 -1.02 0.52 -0.07 1.32 0.49 -0.96 0.04 0.22 0.38 -0.61 1.43 -0.32 0.38 0.22 0.83 0.8 0.48 -0.47 -0.44 -0.96 -1.21
-1.36 -0.99 -1.12 -0.97 -1.47 -0.71 -1.21 -2.11 -0.85 -1.4 -1.96 -1.6 -0.36 0.87 2.01 -0.18 -0.74 0.53 0.28 2.6 0.63 2.22 -0.5 -0.55 -1.06 -2.58 -2.61 -1.74 -1.24 -1.02 -1.77 -1.95
0.02 -0.11 -0.27 0.01 -0.16 0.18 -0.22 -0.22 -0.26 -0.55 -0.75 -0.65 0.96 -0.39 1.38 0.71 -0.33 -0.9 0.51 0.36 -2.32 1.23 -0.25 0.02 1.06 -0.66 -0.52 -0.27 -0.52 -0.54 -1.4 -1.6
-0.81 -0.41 -0.15 0.05 0.3 0.32 0.4 0.11 0.04 -0.41 -0.36 -0.68 -1.67 -1.22 1.85 -1.01 -0.2 -1.12 -0.8 0.85 -0.29 1.59 -1.31 -1.71 0.31 -0.92 0.75 1.04 -0.6 -0.33 -1.58 -1.81
-0.8 -0.57 -0.59 -0.29 -0.24 -0.28 -0.17 -0.5 -0.08 -0.45 -0.67 -0.34 -1.4 -0.16 2.18 -0.25 0.71 -1.0 -0.12 1.08 -0.6 1.95 -0.22 -1.18 -1.44 -0.84 -1.0 -1.27 -0.13 -0.09 -0.31 -0.33
-0.37 -0.21 -0.1 -0.42 0.02 0.15 -0.12 -0.25 -0.06 -0.13 -0.31 -0.45 0.22 0.42 1.51 0.19 0.04 0.32 0.16 0.08 -1.01 0.27 0.12 0.31 -1.77 -0.37 -0.29 0.04 -0.14 0.01 -0.47 -0.22
-0.28 -0.79 -0.42 -0.41 0.11 -0.61 -0.93 -0.19 -0.45 -0.68 -0.23 -0.68 -0.08 0.9 1.15 0.13 -0.54 -0.47 -0.32 -0.12 -0.07 0.93 -0.37 -0.36 0.48 0.58 0.93 0.68 -0.36 -0.45 -0.24 -0.51
-0.1 -0.01 0.21 0.31 0.13 0.24 0.09 0.09 -0.15 -0.13 -0.24 -0.27 0.35 0.31 1.18 0.6 -0.46 -0.71 -0.07 0.02 0.12 0.88 -0.13 -0.07 -0.47 -0.59 -0.22 -0.46 -0.69 -0.59 -0.88 -0.8
-0.69 -0.52 -0.23 -0.05 -0.08 -0.0 0.03 -0.37 0.11 -0.43 -0.34 -0.53 -1.11 -1.54 2.52 -0.9 -0.2 -0.77 -3.16 1.89 -0.37 2.5 -3.27 -4.13 -1.34 -2.59 -1.39 -0.76 -1.22 -0.98 -2.06 -2.24
-0.41 -0.35 -0.46 -0.2 -0.63 -0.32 -0.37 -0.11 -0.1 -0.33 -0.32 -0.42 0.09 0.76 0.93 0.02 -0.55 -0.79 0.11 0.2 -0.11 1.26 -0.32 -0.23 0.87 0.34 0.21 -0.17 -0.51 -0.49 -0.18 -0.19
-0.4 -1.03 -1.06 -0.43 -0.29 0.1 0.25 0.36 0.22 0.18 -0.19 -0.1 -0.71 -0.42 0.93 -0.74 -0.44 0.47 -0.13 0.54 0.27 1.4 -0.46 -0.35 1.19 -0.95 -0.22 -0.35 -0.49 -0.32 -0.65 -0.4

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.