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Heatmap: Cluster_110 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
27.78 25.31 23.21 23.15 24.33 27.59 28.75 29.37 27.79 28.99 30.32 27.71 25.52 27.53 25.97 29.16 16.47 15.57 24.93 26.18 27.19 16.01 20.93 25.09 29.1 21.71 20.18 20.08 17.55 19.0 16.49 15.92
10.57 10.18 8.73 10.22 10.34 12.91 9.55 9.56 9.03 8.84 7.96 7.37 7.3 5.63 9.54 8.36 6.49 5.57 8.11 15.21 36.38 1.8 6.58 6.25 4.91 4.37 7.73 7.34 7.01 7.56 4.44 4.78
0.13 0.25 0.14 0.29 0.0 0.2 0.26 0.14 0.64 0.14 0.18 0.07 1.08 0.25 0.05 0.59 0.0 0.15 0.13 0.0 0.26 1.0 0.12 0.27 0.55 0.11 0.2 0.25 0.12 0.16 0.05 0.02
14.19 13.67 10.76 12.75 12.92 12.81 13.52 14.06 17.63 16.41 16.79 13.75 22.09 25.05 10.31 24.64 11.71 12.57 29.2 17.97 23.29 45.12 13.83 17.8 19.18 24.06 14.78 13.02 12.43 12.74 18.8 20.83
10.72 11.48 11.31 11.78 10.65 12.13 12.15 17.69 18.07 18.68 19.98 16.51 27.0 23.74 22.4 19.34 8.78 10.35 13.91 11.9 9.79 17.26 12.35 14.64 12.1 22.67 10.28 11.1 10.54 9.73 13.42 19.31
68.87 60.09 60.8 65.58 61.66 76.51 81.03 99.48 113.34 103.76 122.62 100.39 143.8 67.8 75.48 122.83 62.67 101.21 89.24 114.65 143.99 93.07 81.23 95.71 176.19 114.22 68.98 62.17 87.94 81.1 90.02 95.57
35.55 27.02 27.24 24.87 26.54 27.13 23.55 26.57 32.93 33.66 34.27 34.66 33.91 45.5 24.29 29.84 19.88 30.49 40.01 93.81 74.81 22.42 23.21 25.7 60.76 29.06 22.03 18.22 23.39 21.71 30.63 40.28
39.14 37.4 39.1 41.57 39.58 40.07 47.88 50.62 51.14 53.81 51.49 48.08 42.48 48.6 32.73 50.68 26.63 21.26 42.55 39.33 49.56 11.46 74.67 92.56 81.9 64.21 30.34 26.93 39.85 36.5 51.09 43.79
275.43 309.93 298.95 353.52 355.35 336.66 360.91 363.54 391.1 434.06 407.9 433.85 461.96 435.62 251.63 563.97 248.15 351.88 459.24 569.41 382.19 117.27 392.84 366.56 746.99 393.59 373.23 335.15 353.87 320.14 384.11 472.27
45.18 51.14 48.14 48.65 51.37 52.32 55.84 66.9 67.91 70.9 70.93 57.75 66.36 77.84 66.42 70.89 36.88 38.79 55.64 52.35 46.67 37.59 60.58 67.73 36.19 59.74 43.17 45.75 42.17 43.45 38.53 40.32
0.27 0.12 0.11 0.24 0.21 0.37 0.29 0.26 0.19 0.2 0.15 0.2 0.1 0.18 1.09 0.12 0.27 0.06 0.39 0.77 2.42 0.31 0.19 0.23 0.41 0.29 0.3 0.59 0.22 0.27 0.15 0.14
6.51 4.99 3.02 5.17 4.75 3.67 3.96 8.82 6.83 9.9 7.62 7.94 16.38 13.5 2.18 13.4 0.36 1.48 6.72 9.65 8.93 0.0 2.31 4.81 9.04 14.57 2.32 1.61 1.5 1.54 2.41 0.87
94.81 106.06 119.69 118.49 109.11 102.38 155.36 176.97 200.18 192.84 201.42 168.0 157.47 92.45 37.68 140.18 109.52 136.37 166.65 217.12 192.96 135.31 196.33 217.07 122.45 174.8 83.39 90.29 143.45 129.66 151.04 167.98
19.24 15.82 15.91 17.74 19.78 15.33 15.26 20.14 22.59 22.07 26.5 23.15 17.65 15.16 11.13 20.69 7.98 7.91 12.85 18.35 15.48 36.0 9.01 9.38 9.82 26.64 19.3 18.19 10.79 11.01 16.59 26.44
217.86 187.59 200.47 197.19 234.71 255.82 221.03 267.08 286.61 281.18 295.11 216.29 317.78 226.31 364.53 333.4 136.93 135.59 221.68 327.05 404.23 298.34 196.28 234.85 254.2 313.32 229.41 196.5 137.14 121.38 146.21 155.71
52.09 51.77 56.07 56.43 73.91 73.89 56.64 46.76 38.0 40.68 32.91 31.79 61.19 65.55 35.35 84.91 45.69 44.28 53.67 48.26 46.83 46.99 34.01 30.22 29.53 58.44 49.43 60.94 37.77 37.66 25.06 24.96
36.93 26.73 22.79 25.46 26.9 29.48 31.12 28.36 32.83 33.17 35.99 30.97 35.08 41.1 17.24 59.78 21.24 47.64 37.25 37.86 61.56 56.7 22.24 25.67 35.98 16.77 26.41 23.6 24.45 26.59 57.21 54.55
85.57 91.67 106.71 93.07 96.71 104.43 103.86 122.34 125.0 119.59 116.14 108.83 154.21 102.24 116.03 143.56 102.86 76.46 135.69 124.63 92.03 165.99 132.08 133.27 43.03 169.95 100.95 87.49 123.96 124.18 105.74 92.38
34.79 26.52 30.52 32.3 34.89 36.88 34.04 51.71 57.59 61.44 58.58 48.08 43.11 57.44 31.32 60.94 15.92 25.86 35.85 45.25 30.23 26.29 29.08 33.52 18.69 55.85 29.62 28.21 28.66 25.92 26.14 24.27
25.49 27.41 24.05 25.49 28.47 26.35 29.15 37.07 37.48 40.81 42.25 34.87 43.97 29.47 34.39 38.78 15.26 15.08 37.94 32.13 30.32 58.19 26.7 31.8 24.8 44.22 16.57 16.16 22.06 20.28 26.7 30.76
17.48 15.04 13.73 12.92 14.86 14.75 14.64 13.29 15.39 15.82 14.82 13.16 26.59 22.96 23.81 28.96 11.7 13.26 19.26 17.63 20.11 26.98 10.42 12.39 12.34 16.87 11.49 15.87 14.89 18.29 17.69 15.14
2.2 0.67 0.72 1.17 3.59 0.46 3.29 0.72 1.38 5.74 1.44 1.97 5.23 2.03 6.23 5.26 0.37 1.13 3.05 0.24 1.22 4.89 1.15 1.95 2.92 3.92 3.14 3.83 0.58 0.29 0.69 0.28
46.48 50.82 49.55 55.16 54.08 59.22 55.96 68.98 62.4 60.29 71.27 69.94 58.81 56.34 71.37 68.44 44.25 43.16 56.65 71.21 169.12 91.59 50.64 58.55 71.7 37.82 31.55 36.36 41.97 47.12 40.53 42.49
22.23 18.26 16.8 19.25 18.4 18.73 15.8 18.58 18.73 18.4 17.03 14.46 32.64 34.7 37.73 48.55 19.45 15.45 34.81 31.39 39.83 13.22 24.37 32.49 45.32 37.58 28.84 21.89 21.51 20.33 55.51 30.84
5.1 3.83 3.4 4.14 5.74 2.78 4.48 4.64 4.98 5.95 4.32 4.91 3.63 1.99 3.47 5.76 4.23 4.58 9.81 0.0 1.37 7.66 3.91 5.49 12.22 6.44 5.43 7.11 4.2 4.14 5.79 7.64
63.24 54.62 59.87 60.56 64.28 59.26 74.66 67.91 65.0 74.22 68.48 61.48 70.6 73.11 74.78 79.16 51.89 53.13 85.19 60.84 60.54 80.87 63.19 66.73 77.59 96.21 87.2 82.65 57.37 59.0 71.96 72.13
88.98 97.71 91.93 98.27 84.19 102.46 98.79 105.0 116.62 122.09 118.35 112.35 108.94 123.1 65.47 148.1 72.84 74.9 140.1 150.66 135.51 87.6 136.1 145.39 186.1 133.57 127.72 114.94 93.87 94.82 127.86 166.24
75.44 66.7 80.23 61.94 53.37 69.23 68.03 75.63 93.06 105.57 103.9 87.93 81.33 54.05 45.67 84.87 53.62 82.7 44.09 66.23 63.73 92.68 39.77 42.38 39.61 84.02 54.32 73.93 74.09 71.4 56.77 63.39
0.44 0.24 0.37 0.19 0.08 0.45 0.12 0.7 0.5 0.58 0.45 0.33 0.53 1.25 1.04 0.31 0.26 0.02 0.33 3.34 4.73 0.61 0.24 0.15 1.0 0.26 0.6 0.98 0.2 0.21 0.14 0.19
4.07 4.5 2.76 3.35 2.9 3.7 3.78 4.56 5.66 6.2 8.1 6.32 6.9 2.12 1.59 4.19 1.67 1.88 2.71 7.29 18.23 2.81 2.67 3.03 8.73 1.54 0.9 1.01 2.18 2.14 3.76 4.67
0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.03 0.0 0.0 0.0 0.07 0.19 0.04 0.1 0.0 0.0 0.29 0.0 0.05 0.11 0.0 0.0 0.0 0.0
115.03 119.53 178.45 157.39 172.64 167.21 190.65 258.69 272.16 271.16 262.17 203.98 242.56 143.25 129.21 273.74 158.05 197.91 190.76 182.2 230.84 375.98 252.48 234.9 115.57 343.08 99.57 116.76 196.01 188.78 112.98 121.92
4.16 3.64 2.79 3.23 2.75 2.8 4.47 4.25 4.27 3.78 3.99 5.31 0.3 0.55 0.89 0.88 2.38 10.72 4.1 18.86 8.29 5.27 1.65 1.15 9.97 4.21 5.09 4.66 3.51 2.93 2.64 2.08
41.68 40.38 39.88 38.45 41.85 39.47 42.55 44.14 45.08 49.24 47.73 44.87 42.57 33.29 39.29 52.34 26.52 24.42 42.94 39.18 40.38 62.55 32.02 34.13 23.39 48.98 40.0 38.07 31.57 35.61 40.13 40.4
20.67 20.26 24.33 23.12 31.32 29.66 28.96 31.09 32.5 29.71 30.83 25.55 32.14 22.1 34.33 30.2 15.09 23.55 23.7 68.8 113.79 45.75 20.91 22.78 75.08 44.1 42.63 42.95 17.13 15.79 17.52 17.39
60.34 51.19 41.98 47.88 44.76 43.27 42.53 47.72 58.83 63.15 65.39 68.61 85.11 78.34 69.45 89.08 38.1 24.98 59.13 77.93 48.46 35.59 62.43 67.71 68.66 91.22 35.92 34.83 42.61 45.03 44.69 49.92
8.48 6.11 5.11 4.17 5.43 5.67 4.26 6.72 5.44 5.96 5.39 5.91 3.95 14.39 4.47 10.02 2.66 4.74 6.94 5.18 15.26 19.42 1.04 2.68 4.58 18.78 10.18 4.31 4.53 3.61 13.78 4.98
0.78 0.51 0.71 0.74 0.51 0.78 0.88 1.05 1.11 2.25 1.94 1.32 4.02 0.85 1.35 2.19 0.65 0.53 2.27 5.01 4.82 3.56 0.84 0.89 2.48 1.91 1.37 1.62 0.68 0.82 0.48 0.61
2.53 2.35 1.73 2.51 2.6 2.94 2.77 1.75 3.03 2.86 2.24 2.51 4.21 1.43 1.51 4.2 2.29 1.09 3.61 3.1 2.31 2.03 2.0 2.35 3.94 1.88 1.29 1.24 2.34 1.75 2.93 3.19
2.23 2.93 4.25 3.79 3.84 3.65 4.4 4.9 4.06 4.26 4.12 2.95 4.5 1.67 4.29 1.71 4.34 3.41 1.04 4.34 4.96 4.44 0.62 0.66 1.09 1.56 1.12 0.8 2.55 2.26 2.45 2.07
8.09 11.68 8.82 12.05 9.26 10.16 11.14 14.11 12.46 13.9 13.25 11.83 4.67 4.01 10.83 5.37 4.1 2.67 7.51 23.69 40.2 11.83 5.01 5.52 23.0 3.24 6.65 5.98 3.97 4.1 5.85 6.18
9.66 10.07 11.65 10.51 8.29 9.99 11.42 11.24 17.63 14.49 12.88 13.72 7.81 19.42 17.27 8.94 2.84 7.38 7.13 19.3 26.5 3.22 12.8 18.58 17.24 11.91 8.6 7.34 3.58 5.35 2.58 4.14
30.28 17.98 14.09 14.93 15.34 12.85 15.52 15.05 20.85 23.91 22.57 21.72 37.51 65.25 28.25 48.21 9.62 17.49 29.67 45.47 52.44 24.59 11.46 12.56 40.07 39.19 18.11 13.42 20.64 16.75 27.36 25.99
1.53 1.75 1.53 1.55 1.64 1.56 1.88 1.79 2.72 1.9 1.89 1.6 4.69 1.38 1.12 3.25 1.01 0.77 2.14 2.02 0.18 3.17 1.75 1.84 2.45 1.59 1.0 1.18 1.08 1.34 1.08 1.53
7.16 5.34 5.96 6.48 7.94 8.13 8.04 7.6 8.35 8.67 8.62 7.31 12.46 7.9 9.48 10.97 5.65 2.17 8.36 7.67 6.74 3.79 7.12 8.14 9.65 12.36 10.91 8.59 5.76 6.56 6.8 7.31
3.33 3.43 1.31 2.31 2.8 2.77 2.18 3.4 3.48 3.26 3.58 2.79 0.1 0.01 0.46 0.81 0.8 0.0 3.12 4.85 5.04 6.01 1.22 2.4 0.37 2.57 0.88 0.89 0.7 1.1 1.21 0.83
4.47 2.89 4.44 6.2 5.82 5.66 4.77 5.67 3.17 6.2 9.9 4.54 5.68 2.06 2.33 5.33 3.22 0.8 7.13 4.57 2.15 9.92 9.16 13.75 3.58 16.22 3.46 4.52 4.21 3.64 3.34 2.16
2.26 2.48 4.4 3.81 5.1 5.22 6.28 2.62 6.05 6.86 3.56 2.7 0.68 1.76 2.36 1.46 3.3 7.3 0.98 8.18 23.43 0.0 1.51 1.67 0.0 3.06 0.0 0.57 1.84 2.56 2.03 1.94
2.22 4.64 2.14 3.0 0.32 0.52 0.51 0.81 0.8 1.73 4.86 2.25 0.35 1.61 3.41 1.49 5.05 0.65 1.07 4.11 22.84 9.89 2.25 1.48 4.0 0.68 1.84 3.91 3.17 3.34 1.37 1.93
1.29 1.29 1.53 1.83 1.02 1.2 1.56 1.5 1.49 1.16 1.24 1.56 3.13 0.72 0.48 2.53 1.44 0.59 1.51 2.8 3.52 2.03 1.56 1.86 3.64 2.16 2.01 1.53 1.61 1.47 1.46 1.82
93.82 62.65 56.5 59.84 47.18 50.62 54.44 112.27 116.1 147.45 121.49 123.5 210.71 106.47 49.65 177.9 47.95 46.49 114.84 186.75 306.16 56.14 65.43 106.03 114.82 151.98 24.45 22.01 98.5 91.73 65.82 65.12
52.98 45.99 49.37 52.42 51.52 46.69 54.52 58.2 68.76 62.98 65.42 53.8 70.12 54.71 40.27 71.2 61.04 41.26 71.55 51.1 61.86 63.15 74.24 76.8 54.46 75.36 46.3 50.07 63.64 66.33 44.58 40.98
101.11 100.76 105.99 91.96 104.36 122.07 127.84 112.71 120.36 139.48 106.03 104.67 110.95 139.18 79.44 181.18 89.22 89.8 122.2 164.31 199.11 35.42 77.44 65.83 99.66 54.84 62.33 44.27 118.51 117.58 156.53 132.83
21.43 16.88 15.04 14.97 10.55 20.59 17.29 18.42 22.36 20.72 14.17 19.87 12.51 47.72 50.59 27.0 14.09 21.35 28.0 84.48 76.41 16.86 10.08 13.02 24.59 4.94 8.01 6.88 21.01 22.92 33.85 28.41
56.29 60.47 45.72 38.71 43.66 40.54 47.14 45.25 46.03 51.39 38.59 28.1 81.39 80.35 41.46 76.13 33.07 31.37 54.9 75.14 37.14 57.35 26.3 22.24 42.39 57.67 44.51 38.73 45.85 33.36 63.14 42.6
11.04 9.0 8.19 10.5 8.5 9.36 9.01 9.96 9.99 10.97 11.55 11.54 11.14 13.36 11.36 11.94 5.73 4.9 12.47 14.09 8.37 2.11 7.23 7.42 18.3 19.49 11.78 10.74 6.82 7.02 8.26 9.1
3.93 3.77 0.87 1.31 0.62 2.07 1.45 1.64 1.18 1.34 0.78 1.41 2.58 4.62 1.36 8.22 1.46 0.47 4.94 6.05 6.54 2.2 4.31 5.24 12.99 2.51 3.37 1.01 1.99 1.66 6.49 2.43
3.37 1.97 2.68 2.32 4.68 5.46 7.05 5.28 7.03 5.1 3.47 3.71 1.78 0.99 4.86 2.25 2.7 2.95 2.09 20.96 45.1 13.17 1.82 1.26 21.22 4.2 11.18 11.44 2.81 3.0 3.09 2.15
18.75 19.98 22.15 20.7 22.95 18.47 16.25 22.27 19.63 20.97 19.27 18.54 19.65 8.99 7.73 30.2 23.92 22.51 26.24 17.64 39.45 23.3 25.64 25.02 26.33 36.13 21.53 25.25 29.85 29.73 15.68 14.46
1.93 2.76 1.37 1.67 1.41 4.87 2.07 0.86 1.08 1.44 1.35 1.17 1.75 1.62 3.02 2.14 2.77 1.32 3.32 4.63 10.31 5.89 2.27 1.6 4.26 2.96 3.13 4.33 1.94 1.46 1.13 1.03
4.47 2.89 4.44 6.2 5.82 5.66 4.77 5.67 3.17 6.2 9.9 4.54 5.68 2.06 2.33 5.33 3.22 0.8 7.13 4.57 2.15 9.92 9.16 13.75 3.58 16.22 3.46 4.52 4.21 3.64 3.34 2.16
3.88 4.34 4.07 3.85 1.66 2.53 2.91 4.42 4.24 5.15 4.53 4.0 5.92 4.56 2.33 6.51 3.7 2.91 6.94 0.0 2.74 5.79 4.49 5.57 4.93 7.27 3.41 5.84 4.52 4.26 5.92 7.32
11.29 14.18 14.78 10.11 9.8 13.35 15.54 16.97 15.77 15.44 17.6 14.86 22.18 10.57 9.31 17.47 5.15 4.24 15.24 11.68 24.39 0.0 7.79 10.95 10.98 6.41 4.38 2.19 8.45 9.32 14.92 13.44
283.38 276.31 309.75 287.12 328.0 351.67 400.35 438.34 580.53 583.11 598.09 487.08 690.19 330.33 384.92 583.88 337.68 411.66 509.58 550.43 545.23 436.42 435.5 514.53 953.89 392.16 140.42 148.24 495.86 435.23 429.37 471.94
24.69 26.62 11.4 15.23 11.45 19.33 12.51 23.42 20.15 19.69 27.3 20.26 13.02 17.79 30.27 16.96 16.89 17.88 15.06 41.85 93.5 18.54 19.18 22.05 91.43 17.87 24.4 25.62 19.45 17.29 10.24 12.95
2.14 1.51 0.61 0.73 0.14 0.97 0.61 1.38 2.0 1.07 0.62 1.08 4.0 2.6 2.69 4.92 2.13 4.35 4.67 8.44 11.27 2.81 2.3 1.87 3.19 0.83 2.64 0.63 2.55 2.21 2.31 1.11
82.0 75.99 65.69 75.17 78.9 73.52 70.96 82.71 87.68 87.22 93.1 86.67 94.19 91.23 64.59 112.01 45.26 39.5 82.28 97.58 72.0 60.44 74.9 81.69 82.05 92.04 45.78 45.86 55.66 57.81 61.05 50.81
5.44 5.39 3.77 5.45 4.26 5.63 3.79 5.23 5.67 6.46 5.97 6.57 5.3 21.97 21.89 10.9 3.17 5.09 5.68 18.83 23.67 2.12 2.71 3.25 6.74 4.65 3.45 3.66 4.6 3.89 6.54 7.1
48.03 44.95 52.54 52.05 54.36 57.93 61.31 88.15 104.3 122.67 116.79 93.31 132.03 48.89 41.82 122.54 56.79 91.27 121.71 85.18 95.09 160.67 115.39 148.37 85.87 68.26 53.96 40.04 87.03 88.18 113.78 141.55
27.26 34.28 30.78 34.78 33.91 27.81 26.68 34.65 35.55 40.45 36.99 35.39 60.37 23.56 15.29 67.18 28.5 30.83 52.18 53.37 33.32 80.35 34.03 38.34 24.39 38.72 12.37 15.39 33.13 29.78 28.51 31.43
4.4 4.1 6.45 3.73 5.09 3.53 3.24 2.92 3.79 6.58 4.5 3.07 4.39 2.41 4.44 7.15 5.38 3.01 7.56 1.1 3.45 3.83 5.42 3.82 4.67 8.55 4.11 4.31 5.57 5.86 2.57 2.86
8.53 1.18 20.95 1.92 3.94 15.64 10.11 4.46 27.07 13.1 1.22 2.55 26.77 17.7 4.18 37.35 45.59 94.75 24.47 53.28 175.06 0.0 63.11 70.21 32.43 14.6 16.85 19.29 39.55 45.34 27.52 34.39
47.04 46.7 30.77 43.25 34.87 39.64 41.52 43.88 50.49 52.85 43.56 53.21 52.15 42.09 37.08 53.2 26.26 26.88 43.84 90.3 112.49 51.86 46.86 55.04 93.62 56.96 34.99 28.09 31.06 30.63 31.01 31.18
8.09 6.64 9.89 8.84 14.0 9.91 9.82 7.52 9.0 10.93 9.08 6.64 19.11 9.1 15.18 20.65 11.44 9.17 21.87 69.23 139.29 37.67 12.3 11.01 67.58 16.83 10.45 9.82 10.71 13.7 10.49 12.59

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)