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Heatmap: Cluster_202 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
105.57 161.29 182.34 311.43 416.28 454.71 344.35 272.89 201.58 178.99 134.12 113.39 315.26 577.99 319.9 394.46 256.42 188.21 477.84 118.22 406.68 32.97 313.73 280.48 1241.03 306.79 423.51 439.94 184.69 207.34 182.7 204.33
58.47 75.19 74.23 79.33 82.54 76.29 74.26 74.42 79.25 63.41 62.11 60.86 93.13 75.99 84.63 104.87 89.59 76.87 91.03 42.07 29.09 13.41 93.73 99.52 47.46 110.42 119.23 134.65 74.81 81.39 44.96 39.52
23.62 24.71 27.23 26.54 33.41 40.61 31.1 31.27 23.62 22.29 19.57 18.63 57.98 38.34 40.28 58.35 20.58 28.27 65.16 6.33 9.12 22.08 29.53 35.44 35.35 37.62 52.61 50.45 23.65 26.84 25.1 32.02
22.2 29.79 26.44 39.83 44.51 40.57 27.69 23.33 19.89 18.59 16.81 16.33 28.75 41.97 31.79 52.11 36.42 14.81 82.4 7.54 17.5 4.64 45.0 41.77 69.81 29.37 36.11 35.21 27.46 29.52 50.85 46.01
17.06 16.21 16.75 16.38 18.79 18.14 18.82 21.04 18.35 18.09 14.89 15.93 21.28 33.15 25.07 24.77 13.58 11.62 37.61 10.04 33.14 9.87 17.55 20.12 59.6 21.47 26.86 28.22 14.43 15.06 12.07 13.85
28.48 24.89 16.35 17.7 16.44 15.43 11.26 8.57 11.58 10.46 12.82 11.66 13.25 52.75 7.34 21.86 25.99 27.68 85.81 1.87 38.39 0.88 22.58 23.08 83.12 21.16 23.2 19.14 28.81 28.11 32.42 21.91
43.46 54.65 58.63 60.33 67.76 68.91 59.93 66.26 52.33 55.16 43.15 43.28 86.06 123.52 68.51 60.03 34.28 31.21 162.47 29.79 46.82 22.27 39.83 49.98 152.68 75.71 83.1 88.85 35.45 37.15 27.54 27.86
31.95 32.38 30.77 34.29 32.04 31.33 28.25 32.32 30.15 28.66 26.75 27.35 56.17 64.06 35.07 60.48 26.09 21.43 49.02 8.07 58.65 17.57 36.04 38.91 73.02 21.48 18.57 17.32 32.98 31.98 26.78 26.67
39.5 48.54 46.3 50.64 48.38 48.72 50.76 55.12 54.32 53.25 44.9 43.8 61.29 82.7 57.55 75.83 39.11 34.71 65.57 31.98 54.01 27.61 45.19 49.25 86.19 43.4 39.09 42.71 39.04 43.06 30.62 41.37
11.96 12.64 15.43 15.73 16.02 17.69 18.04 14.11 17.95 13.25 9.32 8.71 27.38 18.34 5.09 19.78 18.3 9.45 48.97 2.08 24.58 3.88 11.02 8.39 36.08 11.9 19.71 19.07 16.07 17.32 19.12 13.7
1.36 1.79 1.48 2.33 1.92 2.5 1.6 1.38 1.38 0.7 1.41 0.72 1.29 7.18 1.45 2.87 0.58 0.73 6.57 1.78 1.03 0.0 2.52 3.97 3.83 2.62 3.69 4.53 0.42 0.6 0.28 0.56
63.95 85.04 78.28 90.58 84.29 73.04 62.22 51.58 51.8 48.4 53.86 51.92 66.22 92.42 67.65 105.06 65.9 49.89 120.02 9.05 10.87 17.64 78.75 85.87 103.42 107.68 129.84 148.71 60.86 71.22 121.54 103.31
36.63 67.21 67.41 72.17 86.57 70.8 38.89 36.9 28.86 26.4 24.67 21.27 126.32 28.94 14.9 81.86 62.53 38.39 118.07 0.24 2.61 1.15 97.82 80.88 16.17 70.94 158.29 145.94 46.59 47.72 63.74 57.74
0.75 0.92 0.73 0.77 0.85 1.2 0.93 0.85 0.92 1.01 0.58 0.86 2.23 1.26 1.8 2.29 0.7 1.96 2.97 0.0 0.44 0.33 1.05 1.36 1.56 0.82 1.51 1.14 0.89 0.88 0.61 0.63
25.2 26.76 22.06 28.69 31.74 26.37 26.51 24.11 26.92 27.17 28.93 25.99 42.15 26.25 28.53 46.69 27.94 33.65 37.13 19.99 15.23 1.07 44.76 48.26 27.24 48.24 41.97 34.79 32.56 33.66 25.75 26.14
0.72 0.67 1.06 0.88 0.73 1.13 0.65 0.81 0.41 0.26 0.24 0.68 0.63 0.69 0.9 1.2 0.34 0.71 3.16 0.0 1.08 0.0 0.66 0.86 3.01 0.28 0.87 0.65 0.44 0.35 0.28 0.19
11.71 13.88 15.88 17.02 17.97 15.91 14.99 15.58 15.12 12.6 12.23 10.19 17.84 16.32 15.79 20.43 17.75 10.06 25.22 16.99 8.66 10.76 16.65 14.46 15.51 26.09 23.12 26.23 12.94 13.26 11.23 13.61
1.89 2.05 2.76 2.44 3.04 2.91 2.34 2.65 3.12 2.08 2.22 2.26 2.97 1.37 3.33 5.56 2.55 0.55 4.09 0.04 0.7 0.0 3.75 3.87 2.24 4.17 4.57 6.32 3.69 3.65 0.83 0.95
44.55 43.83 36.27 45.77 50.81 50.64 47.3 47.32 40.05 43.2 40.13 39.29 79.97 74.6 52.25 85.05 38.45 40.08 80.81 9.79 41.36 20.69 52.11 57.19 125.18 45.41 58.0 56.88 45.84 46.77 66.16 59.03
0.44 0.42 0.25 0.16 0.13 0.31 0.23 0.45 0.36 0.63 0.34 0.25 0.77 0.46 0.17 0.63 0.07 0.29 1.39 0.0 0.0 0.0 0.44 1.16 1.14 0.65 1.01 0.49 0.12 0.11 0.33 0.33
36.25 35.95 42.36 49.36 60.03 65.19 77.99 58.12 60.05 55.36 52.03 42.38 112.49 63.47 31.35 160.92 72.56 79.66 138.6 17.65 149.73 56.71 81.31 77.72 154.11 82.73 125.53 139.16 93.46 90.7 63.89 62.22
0.24 0.29 0.08 0.32 0.74 0.29 0.13 0.34 0.33 0.1 0.19 0.11 0.81 0.91 0.54 1.54 0.27 0.02 1.64 0.0 0.0 0.0 0.43 0.54 1.12 0.65 1.39 0.87 0.31 0.35 0.23 0.24
0.11 0.04 0.13 0.15 0.03 0.06 0.16 0.12 0.03 0.01 0.04 0.12 0.26 0.59 0.05 0.18 0.05 0.16 0.39 0.0 0.25 0.11 0.09 0.05 0.43 0.39 0.43 0.38 0.04 0.05 0.02 0.02
0.73 0.88 1.13 1.32 1.55 1.93 1.02 0.81 0.93 0.6 0.54 0.59 1.0 0.9 1.75 1.1 1.03 2.49 2.79 0.0 0.0 0.0 1.26 1.1 4.51 1.25 2.35 1.95 0.68 0.52 1.2 0.59
7.24 7.7 10.38 10.15 12.26 14.71 12.5 15.18 15.2 14.17 11.09 9.69 10.88 11.92 16.9 11.81 11.4 8.82 13.12 0.57 6.23 6.54 12.04 14.28 26.1 13.29 23.26 15.48 9.65 9.81 14.99 18.14
41.5 41.69 35.93 34.45 41.84 40.62 27.99 40.09 30.46 29.69 30.53 32.48 43.18 52.81 37.7 49.19 25.37 31.85 40.94 11.14 15.12 3.88 35.59 36.02 65.13 31.51 40.64 37.55 26.98 27.97 26.26 33.33
0.11 0.09 0.13 0.0 0.12 0.21 0.37 0.18 0.17 0.1 0.0 0.0 0.09 0.73 0.31 0.18 0.0 0.15 1.3 0.0 0.19 0.0 0.05 0.04 1.07 0.73 0.22 0.49 0.2 0.16 0.0 0.0
0.88 1.61 2.06 1.61 1.12 1.78 1.65 1.33 1.42 0.9 0.91 0.7 1.69 0.6 1.76 3.8 1.3 0.84 3.37 0.2 0.02 1.06 2.38 1.89 0.57 2.97 2.43 3.81 1.81 2.18 0.43 0.27
1.77 1.21 1.46 1.56 2.42 1.52 1.83 1.55 1.46 1.42 1.21 1.39 2.7 2.6 2.88 2.98 1.65 1.34 5.68 1.08 2.75 2.2 2.19 2.24 3.58 1.67 2.56 2.4 2.03 2.04 2.86 2.96
25.27 26.04 22.8 26.92 29.66 24.96 27.99 25.94 25.92 23.98 22.76 22.73 27.09 28.91 33.83 31.48 19.24 16.52 34.66 12.51 4.65 12.26 36.71 43.15 61.42 36.83 36.71 37.79 21.37 23.81 51.18 52.63
4.14 4.69 5.94 6.42 9.44 7.85 5.17 5.57 6.93 4.5 4.86 4.04 13.98 8.73 3.68 12.52 7.54 5.41 16.21 0.04 4.42 0.67 11.49 15.46 7.98 9.49 12.09 12.25 7.64 7.49 4.34 4.52
17.4 20.79 17.42 17.45 20.89 14.06 9.27 10.36 10.69 8.87 11.38 9.03 36.85 25.21 3.71 45.4 9.87 12.86 51.19 5.38 9.01 0.0 25.06 40.2 38.71 26.37 23.25 26.02 10.6 12.15 8.73 12.29
8.31 12.2 13.13 15.6 16.14 16.02 11.22 10.4 8.57 8.67 7.16 7.38 17.13 24.52 23.08 17.34 10.26 5.28 14.23 3.39 7.82 5.32 11.29 10.52 20.39 9.15 15.97 15.49 6.35 7.92 7.83 8.62
62.79 62.88 51.69 61.01 57.79 68.8 57.01 69.41 67.06 67.97 61.9 54.68 160.89 114.4 25.03 162.67 90.46 109.05 100.77 9.39 109.78 3.04 166.86 169.69 179.16 106.43 96.17 97.72 116.45 119.16 101.14 98.69
3.09 2.59 2.18 3.32 3.65 3.34 2.09 2.94 3.27 2.46 2.93 3.15 3.63 2.88 4.88 6.02 2.9 2.83 8.49 0.08 1.92 0.07 3.89 3.42 5.11 6.42 5.15 4.21 3.76 3.25 1.54 2.26
2.57 2.56 1.6 2.07 2.25 1.97 1.43 2.53 1.4 1.61 1.72 1.36 6.48 3.22 2.81 5.58 2.01 0.83 8.2 0.08 0.09 0.0 3.2 2.55 4.29 2.87 5.88 5.16 1.93 2.14 0.69 0.63
36.05 52.4 46.45 47.18 48.68 52.15 43.58 41.89 40.52 35.05 36.97 29.02 47.79 60.62 29.32 77.76 36.87 53.91 86.92 2.53 29.34 3.5 90.06 91.02 48.39 78.93 115.03 108.04 42.35 45.15 27.31 27.14
22.92 27.66 26.63 40.07 39.08 35.82 37.67 30.64 29.52 26.28 24.75 19.17 34.69 45.81 32.38 42.38 31.33 24.4 62.37 20.8 20.82 17.47 26.05 22.26 60.23 47.35 78.85 64.01 25.16 25.6 27.1 33.64
16.1 13.81 15.68 14.16 16.23 17.36 13.17 16.74 11.38 14.2 12.51 11.37 20.17 16.13 28.97 28.13 17.07 11.23 28.41 15.06 2.19 4.17 18.2 20.25 15.01 36.54 32.45 33.29 20.23 22.54 13.52 13.43
5.3 7.55 2.54 5.82 6.05 6.19 5.77 6.78 5.87 5.09 5.25 5.49 12.05 5.47 10.27 14.44 7.14 8.01 9.63 0.0 0.34 0.0 8.35 9.48 3.17 11.92 10.42 13.55 8.31 8.94 4.54 4.1
29.69 26.66 27.01 22.0 24.35 27.2 27.71 29.76 27.66 31.37 28.37 27.63 26.93 68.53 38.63 51.79 27.58 47.05 90.46 32.85 61.52 7.32 33.97 32.3 30.93 34.06 28.85 19.61 45.41 44.45 40.3 40.87
42.37 37.99 25.82 49.78 37.65 46.7 46.68 38.11 37.52 56.74 46.36 58.56 65.66 29.06 28.29 80.08 58.1 50.54 71.2 6.8 53.12 4.2 62.1 65.1 101.2 77.58 65.82 61.43 70.28 63.32 57.0 56.34
205.27 190.69 163.49 201.98 190.61 205.57 158.05 208.44 179.41 198.54 196.12 219.74 319.48 217.43 53.03 335.27 233.89 170.25 288.97 63.48 184.49 13.87 302.6 357.96 201.17 346.68 249.88 259.38 287.47 281.98 257.63 206.25
69.19 72.44 72.59 90.41 86.01 91.39 84.26 86.75 76.02 66.39 59.6 65.56 103.7 159.48 118.79 116.18 79.2 75.07 107.84 38.19 61.14 22.2 83.32 89.78 167.96 64.42 103.36 90.36 80.7 85.8 65.67 68.08
135.3 124.4 106.81 105.61 86.26 91.07 81.3 103.74 101.34 87.63 105.11 110.78 177.57 92.46 38.21 152.77 106.03 105.61 147.63 18.0 59.59 14.94 156.43 196.75 231.14 121.73 125.95 124.92 123.56 130.57 98.01 104.33
7.78 6.85 8.43 8.03 9.37 10.49 10.67 11.89 11.03 9.48 9.11 8.57 18.75 9.87 10.72 21.55 9.04 5.99 20.67 5.35 4.46 2.75 15.25 15.97 8.91 17.02 17.05 20.19 12.55 12.88 6.81 5.89
0.87 1.09 1.95 1.85 2.41 2.04 1.94 1.39 1.86 1.39 1.09 1.15 1.5 1.11 3.45 2.71 2.32 1.27 4.49 1.11 0.07 0.08 2.58 1.82 0.76 2.87 3.04 5.45 2.23 2.73 1.42 1.37

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)