Heatmap: Cluster_38 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
- - - - - - - - - - - - 1.34 2.25 - 1.37 1.22 - 2.21 - - - - - - - - - - - 3.92 -
- - - - - - - - - - - - 2.48 - -1.39 1.0 0.49 - 1.69 2.41 2.72 - -0.23 0.53 1.38 - - - -0.16 -0.61 -0.61 -1.26
- - - - - - - - - - - - 2.48 - -1.39 1.0 0.49 - 1.69 2.41 2.72 - -0.23 0.53 1.38 - - - -0.16 -0.61 -0.61 -1.26
0.66 -0.37 -3.88 -3.33 -1.85 -1.42 -3.72 -0.47 -1.36 -1.6 -0.96 -0.19 -5.1 -2.55 - -2.09 -0.86 - 0.75 - - - 0.27 -1.22 1.4 2.35 0.52 -2.75 0.49 -0.18 3.28 -1.97
0.5 -0.59 -1.72 -3.88 0.56 -4.26 - 0.15 -1.15 -2.97 -1.08 -0.37 - -4.38 - - -0.03 - -0.28 - - - 0.76 -0.46 0.22 3.18 0.23 -1.92 0.61 -0.09 2.74 -
- - - - - - - - - - - - - - - - - 3.77 0.05 2.81 - - 0.21 -0.01 - - - - 1.83 - 0.25 1.76
-0.47 0.75 0.54 -1.32 0.54 -0.01 - -0.18 -0.5 -0.12 -0.43 0.32 -0.58 -1.82 - 0.51 -1.1 2.54 -2.08 2.56 - - -1.64 -0.92 -0.56 -0.59 - - -1.22 -0.79 -1.25 1.26
0.26 0.09 -0.03 0.07 0.19 0.5 -0.16 -0.44 -0.79 -0.39 -0.02 -0.07 -2.11 -1.47 -1.43 0.77 -1.83 0.98 -0.63 1.98 -2.69 1.17 -0.23 0.31 0.45 -1.13 -1.19 -0.61 -0.65 0.05 -0.04 -0.6
-0.68 -0.3 -0.15 -0.22 0.21 -0.0 -0.24 -0.22 -0.39 -0.56 -0.7 -0.95 0.19 -0.09 -1.48 0.28 -0.26 -0.65 0.32 0.75 0.18 -0.3 0.67 0.85 0.55 0.52 0.24 0.35 -0.13 -0.07 -0.08 -0.29
-0.28 -0.71 -0.47 -0.41 -0.36 -0.77 -0.3 0.13 0.03 0.2 0.24 -0.27 -1.04 -1.74 -1.52 -0.43 -0.34 -0.8 0.41 -1.73 0.91 -0.67 -0.03 0.03 0.17 1.27 -0.06 0.22 0.31 0.42 1.31 0.63
-0.96 -0.15 -0.16 0.05 -0.01 0.26 0.43 -0.5 -0.2 -0.39 -0.6 -0.91 -0.37 -2.23 -0.09 0.35 0.62 0.57 0.64 0.85 -1.24 -0.77 0.41 0.09 -0.77 0.03 -1.17 -0.2 0.72 1.07 0.29 -0.48
-0.56 -0.45 -0.47 -0.2 0.18 -0.42 -0.79 -0.43 -0.22 -0.46 -0.18 -0.25 0.56 0.03 -0.67 0.58 -0.73 -0.03 0.16 1.1 0.6 0.29 0.28 0.51 0.47 0.29 0.16 0.12 -0.1 -0.46 -0.72 -0.81
-0.73 -0.62 -1.9 -0.24 0.18 -0.34 -1.94 -1.79 -4.76 -2.0 -1.11 -3.14 -2.4 -3.78 -2.64 -0.27 0.37 0.72 0.94 1.38 -27.83 - 0.83 0.88 -0.43 -0.22 -0.57 -1.31 -0.43 -1.4 3.1 0.71
-0.57 -0.39 -0.46 -0.47 -0.3 -0.16 -0.4 -0.51 -0.45 -0.53 -0.57 -0.63 -0.77 -2.46 -1.49 -0.21 0.35 1.33 0.31 1.18 0.3 -0.27 0.22 -0.12 0.6 0.25 0.4 0.52 0.68 0.5 -0.53 -0.71
0.87 0.06 -0.89 -0.81 -1.54 -1.32 -1.4 -1.67 -1.7 -1.37 -1.13 -0.12 -0.04 -0.05 0.72 0.52 0.01 0.34 1.53 1.59 1.32 0.0 -0.02 0.33 0.34 0.21 -0.84 -1.22 -0.83 -0.79 -1.0 -0.91
-0.45 -0.32 -0.26 -0.23 -0.35 0.01 -0.43 -0.11 -0.15 -0.04 -0.32 -0.47 -0.11 0.34 -0.57 0.21 -0.22 -0.67 0.2 -1.26 -0.31 -1.19 0.75 0.73 0.53 0.82 0.44 0.13 0.1 0.14 0.41 0.14
-0.51 -1.24 -1.78 -1.94 -1.91 -1.88 -2.04 -1.07 -0.86 -0.72 -0.67 -0.76 -0.49 -0.81 -1.9 0.15 -1.72 2.13 1.17 1.14 0.63 -0.25 -0.83 -0.4 0.79 1.14 -0.5 -3.13 -0.01 -0.69 1.78 0.46
-0.61 -0.55 -0.54 -0.52 -0.73 -0.25 -0.45 -0.54 -0.2 -0.25 -0.28 -0.43 -0.03 -0.12 0.05 0.23 -0.54 -0.69 -0.12 1.48 1.53 1.2 -0.69 -0.21 0.52 0.49 -0.13 0.01 -0.55 -0.6 -0.72 -0.64
-1.16 -1.21 -0.5 0.17 0.21 0.33 0.07 0.42 -0.07 -0.19 -0.59 -0.88 -1.48 -5.08 -6.3 -1.84 0.11 -0.61 0.03 -1.92 1.23 -4.91 0.52 0.5 0.73 1.45 0.25 0.16 0.79 0.67 0.37 0.3
-0.7 -0.99 -0.26 -0.44 -1.61 -1.03 -0.19 0.29 -1.0 0.55 -0.04 -1.23 0.08 -1.63 -2.38 0.69 0.29 1.22 0.73 0.51 -1.4 - 0.14 0.55 -0.21 0.33 0.53 0.39 0.52 0.3 0.5 0.4
-0.22 -0.09 -0.16 -0.09 -0.24 -0.08 -0.1 -0.17 0.14 0.23 0.02 0.15 0.82 -0.84 -0.67 0.52 0.22 -0.12 0.46 -0.29 -1.61 -1.97 1.01 0.28 -1.38 -0.44 -0.85 -0.38 0.41 0.47 0.4 0.5
-4.19 -5.58 -6.31 -5.71 -5.56 -5.46 -4.43 -4.98 -4.13 -4.19 -3.71 -4.1 -0.16 -1.83 -2.18 0.34 0.6 1.16 0.98 1.69 1.59 0.04 0.51 0.55 1.92 -3.39 -1.97 -1.71 1.19 1.26 0.93 0.96
-1.92 -2.81 -2.85 -2.86 -4.02 -3.84 -3.55 -3.9 -3.82 -2.0 -2.46 -3.06 -1.41 -0.02 0.39 0.06 0.76 0.14 1.31 -1.53 1.35 0.46 0.28 0.73 1.47 -1.18 -1.37 -2.89 0.8 0.97 1.68 1.86
-1.8 -1.73 -2.02 -1.59 -1.43 -1.42 -2.21 -1.77 -2.33 -1.55 -2.0 -1.42 0.57 -0.55 -0.55 1.16 0.71 1.27 0.54 2.31 1.18 -3.3 0.98 0.84 0.19 -3.19 -1.69 -1.04 0.4 0.29 -0.0 0.2
-2.93 -1.76 - -0.99 - -0.93 -0.44 -0.31 -3.97 -1.3 -1.39 -0.44 0.02 -0.21 0.47 -0.74 1.19 0.99 0.5 -0.02 0.34 - 1.27 0.32 1.91 - 0.12 - 0.63 0.96 0.31 1.25
-1.17 -1.0 -1.01 -0.74 -1.37 -0.83 -0.56 -0.38 -0.13 -0.36 -0.45 -0.55 -2.23 -3.42 -1.71 -1.57 0.23 0.31 1.27 1.31 1.0 0.74 0.35 1.03 1.3 -1.57 -0.94 -0.26 0.7 0.9 -0.13 -0.58
-0.66 -0.18 -0.7 -0.8 -0.85 -0.83 -0.3 -0.71 -0.59 -0.6 -1.13 -0.93 -1.04 -1.03 0.64 -1.53 -1.26 -1.92 -1.22 -1.78 -0.65 1.81 -1.3 -0.94 0.74 -0.27 1.03 0.45 -1.79 -1.74 2.0 2.2
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.0 -
-0.56 -1.43 -3.13 -0.3 -0.79 -0.9 -2.1 -0.35 -1.78 -2.04 -0.87 -1.21 -3.03 - -1.12 -4.07 -3.84 2.65 1.22 2.03 0.99 0.93 -3.31 -3.14 2.06 0.21 0.83 0.45 -3.77 -2.59 -3.44 -4.11
0.79 -0.21 0.59 0.12 -1.64 0.06 -1.51 0.18 0.12 -0.83 0.08 0.13 -3.96 1.26 2.01 -2.96 -4.0 -2.33 -4.13 2.85 1.82 -0.99 - -4.19 -2.12 -1.11 -1.96 -0.36 -2.59 - - -
-0.78 -1.49 -1.22 -1.61 -0.33 0.64 1.43 -0.16 -0.27 0.87 1.06 -1.21 - -1.96 -2.68 -0.73 0.81 - 1.96 1.02 - - 0.46 0.29 0.73 0.13 - -1.09 0.87 0.6 -0.54 -0.61
-0.08 -0.23 -0.14 -0.36 -0.38 -0.54 0.12 -0.59 -0.15 -0.06 0.58 0.27 -1.8 0.13 -0.11 -0.84 0.32 0.69 0.47 -5.99 -2.26 -0.67 -0.57 -0.41 -0.27 -1.02 -0.94 -0.81 0.45 0.74 1.55 1.57
-0.06 -0.18 -0.36 -0.27 -0.62 0.01 -0.2 0.15 -0.04 -0.14 -0.11 -0.36 -0.25 0.41 0.71 0.08 -0.98 -1.02 -0.16 1.13 1.21 0.26 -0.56 -0.38 0.3 -0.02 0.32 -0.16 -0.74 -0.56 -0.18 -0.12
-1.21 -0.83 - -0.89 - - - - - - -0.33 0.92 -1.67 -0.16 2.11 - 0.6 2.14 0.21 - - -0.06 0.57 1.53 - -0.2 -0.4 - 1.56 1.26 -1.74 1.36
-0.19 -0.15 -0.63 -0.62 -0.55 -0.3 0.08 -0.8 -0.28 0.1 0.23 -0.21 -1.23 0.04 -0.25 -0.38 0.54 0.53 0.5 -0.97 -0.75 0.18 -0.28 -0.19 0.29 -1.15 -0.72 -1.0 0.09 0.57 1.36 1.41
-5.09 -4.99 -1.55 -4.15 - - - - - - -3.99 -3.35 -2.35 -0.09 0.11 0.16 0.23 -2.62 0.86 - 1.43 - 1.31 0.35 1.83 1.81 1.9 -0.91 0.55 -0.25 1.86 0.25
-1.47 -1.57 -4.99 -6.5 -2.3 -2.72 - -2.63 -32.77 -3.98 -3.76 -1.78 -3.55 -4.48 - 0.04 0.35 -1.46 0.89 - 2.08 - 2.13 0.61 1.57 -2.14 -1.22 - 0.88 -0.05 2.93 0.55
-2.87 -1.74 - -3.66 -0.46 - -2.29 -0.49 -3.24 -2.48 -1.04 -1.38 1.02 -3.24 -1.06 1.02 -0.32 1.67 0.25 0.73 1.15 0.03 0.85 0.23 1.97 -2.04 -0.83 0.08 1.04 0.82 -0.63 -0.46
-9.4 -8.02 - - - -7.81 - - - -7.27 -6.97 -8.1 0.94 0.85 1.92 0.74 1.94 0.53 -0.67 -0.43 -3.55 -2.11 1.41 1.69 -0.48 1.42 -1.42 -0.83 0.64 0.32 0.86 -0.06
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.0 -
-0.76 -0.49 -0.53 -0.87 -1.09 -0.57 -1.02 -1.58 -1.18 -1.03 -0.73 -0.48 -0.98 -0.41 -0.62 -0.75 0.34 0.33 0.36 -0.33 -1.28 0.85 -1.28 -2.1 1.25 -0.69 -1.02 -1.27 0.65 1.03 1.96 1.96
-0.29 -0.66 -1.21 -1.14 -1.12 -1.04 -1.03 -0.71 -0.53 -0.62 -0.88 -0.86 -0.23 0.32 -1.63 -0.18 -0.61 -0.07 1.49 0.79 0.21 0.35 -0.7 -0.39 1.09 0.15 -0.33 -0.54 -0.15 0.0 1.62 1.14
0.26 -0.14 -0.14 -0.83 0.02 -1.44 -1.11 -0.37 -1.22 -1.45 -1.66 -0.34 -2.45 -2.69 -2.28 -0.9 -0.24 1.77 -0.12 2.33 0.17 1.44 0.02 -0.74 1.13 -0.55 -0.69 -0.85 0.24 0.34 -1.2 -1.9
-0.37 -0.94 -1.46 -0.73 -0.6 -1.76 -0.1 -1.09 0.58 -0.15 -0.3 -1.08 0.58 -1.11 0.25 -1.12 0.52 -2.38 1.34 - -0.21 1.13 -0.02 -0.51 0.68 0.12 -1.01 -0.39 0.58 0.76 0.48 1.41
-1.16 -2.1 -2.2 -1.56 -1.54 -2.06 -2.15 -1.95 -1.57 -1.38 -1.7 -1.31 0.36 0.57 -0.44 1.39 -0.73 0.45 0.58 1.79 1.31 0.87 0.56 1.48 1.16 -1.44 -2.35 -2.11 0.03 0.19 -0.7 -0.27
-0.94 -1.01 -2.32 -0.97 -0.45 -1.21 -1.53 -2.15 -1.24 -1.06 -1.44 -1.41 -0.1 -0.57 -0.51 0.27 0.3 1.35 -0.01 1.53 0.76 -0.15 0.4 0.66 1.62 0.21 -0.01 -1.06 0.3 0.6 -0.25 -0.13
-2.59 -2.91 -3.28 -4.16 -4.17 -3.76 -4.39 -3.58 -2.81 -2.77 -2.34 -2.68 -2.07 -1.23 -0.72 -3.5 -0.33 2.6 0.21 2.29 - - 2.54 2.81 0.05 -4.1 -2.5 -5.36 -0.94 -0.33 -2.16 -0.46
-0.87 -0.67 -1.47 -1.23 -0.63 -0.39 -0.08 0.05 -1.03 -0.04 -0.26 -0.38 -0.6 -5.77 -2.5 -0.2 -0.29 -4.39 1.58 0.83 0.42 0.67 0.18 0.77 0.5 1.1 -0.11 -1.13 0.6 0.63 -0.03 0.55
-0.6 -1.44 -1.69 -1.01 -1.04 -1.37 -1.42 -1.32 -1.3 -0.32 -0.92 -0.87 0.12 0.59 -0.34 1.23 -0.19 0.87 0.68 0.78 1.08 0.6 -0.19 0.92 1.08 -1.3 -2.5 -2.35 0.49 0.66 -0.18 0.41
-1.04 -1.25 -1.49 -1.57 -1.75 -1.97 -1.57 -1.84 -1.29 -0.81 -1.35 -0.72 -0.34 0.81 -0.49 1.04 0.62 1.56 0.96 0.68 -2.51 -1.6 0.41 0.69 -0.77 -0.55 -0.77 -1.19 0.79 0.94 1.49 0.79
0.17 -0.16 -0.25 -0.05 -0.09 -0.24 -0.42 0.04 0.33 0.3 0.37 0.36 -0.54 -0.26 -0.84 0.56 -0.21 0.02 0.54 -0.07 -0.35 -1.56 0.69 0.88 -0.45 -0.73 -1.27 -1.22 -0.02 0.27 0.35 0.57
-0.53 -0.03 -0.6 -0.11 -0.45 -0.5 -0.2 -0.06 0.23 0.41 -0.25 0.09 -0.07 -0.93 -0.53 0.33 0.1 -0.19 0.79 0.18 -2.36 -1.1 0.42 0.44 -1.39 0.1 -0.23 -0.48 0.52 0.59 0.83 0.8
0.81 -0.48 -0.64 -1.09 -0.97 -1.08 -0.77 -0.76 -0.97 -0.15 0.01 0.44 -0.63 1.06 -0.85 0.51 -0.75 0.51 0.88 1.08 1.52 -0.03 -0.86 -0.66 -0.89 -1.19 -0.77 -1.03 -0.01 0.08 0.48 0.34
-0.29 -0.13 -0.38 -0.46 -0.43 -0.37 -0.57 -0.71 -0.75 -0.81 -0.53 -0.73 0.27 -0.15 -1.43 0.6 -0.31 0.72 0.3 1.51 1.37 -1.17 0.78 0.7 0.89 -1.52 -1.58 -1.35 -0.2 -0.34 -0.04 0.09
-0.76 -0.85 -1.24 -1.23 -1.04 -1.3 -1.52 -1.24 -1.17 -1.15 -1.08 -1.25 -1.07 0.56 1.0 -0.17 0.58 0.42 0.92 -0.34 -0.3 -0.74 0.08 0.71 1.51 -0.7 -1.14 -1.37 0.58 0.63 1.25 1.24
- - - - - - - - - - - - - - - 1.88 1.59 2.4 - - - - - - - - - - 1.79 1.73 3.33 1.69
-0.79 -1.36 -1.0 -0.53 0.15 -0.95 -1.11 -0.63 -1.22 -1.21 -1.22 -1.2 0.28 0.24 0.81 0.31 0.38 1.74 0.24 1.01 -0.97 0.35 0.44 0.28 -1.96 -0.99 -0.25 0.14 0.41 0.22 0.39 0.36
-0.89 -0.83 -1.91 -0.66 -0.59 -0.41 -1.03 -1.48 -0.39 -1.27 -1.04 -0.71 0.31 -0.91 -0.25 0.48 -0.04 0.86 0.53 1.74 0.53 -3.33 -0.09 -0.14 1.18 -0.06 0.93 0.41 0.07 -0.1 -0.03 0.08
-0.18 -2.0 -1.92 -1.4 -1.51 -0.61 -0.4 0.31 -0.88 -0.34 -0.13 -0.4 -1.89 -0.39 0.54 -0.75 -0.85 1.14 1.06 -0.83 -1.48 1.73 -1.07 -1.02 -0.21 -1.38 -0.09 -2.04 -0.28 -0.15 1.55 2.0
0.6 -0.07 -0.6 -0.8 -1.08 -0.92 -0.65 -0.74 -0.62 0.42 -0.19 -0.17 -1.14 0.82 -1.01 0.55 0.16 -0.42 -0.19 -3.84 1.24 -1.86 -0.89 -1.49 0.89 -0.35 -1.34 -1.99 0.3 0.04 2.19 0.75
-0.04 0.21 -0.06 0.23 0.44 0.45 0.03 0.0 0.05 0.02 0.03 0.05 -0.25 -0.65 -0.23 0.07 -0.88 0.23 -0.15 1.08 -0.14 0.48 -0.06 0.01 0.51 -0.79 -0.94 -0.76 -0.35 -0.48 -0.29 0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.