Heatmap: Cluster_199 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo107406	-0.42	-0.22	-0.51	-0.42	-0.11	0.14	-0.35	-0.03	0.03	-0.12	-0.47	-0.66	-0.1	-0.05	0.35	0.37	-0.53	-1.15	0.4	0.38	0.2	-0.13	-0.21	-0.09	0.94	0.5	0.79	0.54	-0.15	-0.12	-0.47	-0.54
Smo107696	-0.1	-0.17	-0.24	-0.09	0.19	0.14	-0.15	0.15	0.14	0.22	-0.01	-0.23	0.44	0.2	0.77	0.46	-0.51	-0.82	0.27	-0.98	0.16	-2.41	-0.37	0.05	0.6	0.39	0.57	0.37	-0.55	-0.46	-0.59	-0.65
Smo111128	-0.06	-0.28	-0.06	-0.3	0.01	-0.17	-0.29	-0.04	-0.18	-0.25	-0.35	-0.55	-0.06	-0.19	0.2	0.05	-0.9	-0.87	-0.06	0.39	0.57	-1.02	-0.38	-0.32	1.0	1.18	1.01	1.09	-0.6	-0.59	-1.16	-1.06
Smo117647	-1.1	-0.02	-0.55	-0.05	0.22	0.26	-0.05	0.42	0.71	-0.92	-1.35	-0.83	-1.02	-1.07	1.03	-0.7	-0.48	-1.68	-0.01	-1.06	0.63	0.62	-0.2	-0.32	0.68	1.39	1.11	0.87	-0.51	-0.23	-2.38	-2.01
Smo118949	-1.07	-0.92	-0.76	-0.62	-0.37	-0.44	-0.15	-0.48	-0.51	-0.66	-0.72	-1.14	-0.97	-1.16	0.66	-0.51	0.34	0.24	-0.18	0.57	0.29	-2.25	-0.19	0.16	1.56	0.34	1.31	1.42	0.28	0.37	-1.0	-1.41
Smo124666	-0.39	-0.03	-0.38	0.44	0.29	0.24	0.24	-0.17	-0.17	-0.08	-0.27	-0.51	-0.48	-0.74	0.07	-0.3	-0.1	-0.27	0.1	-0.51	0.18	-0.8	-0.3	-0.17	1.14	0.74	1.12	0.9	-0.62	-0.29	-1.46	-1.23
Smo145922	-0.87	-0.79	-0.52	-0.39	-0.01	0.0	-0.13	-0.06	-0.24	-0.37	-0.44	-0.61	0.43	-0.04	0.75	0.49	-0.67	-0.95	0.8	-0.49	-0.68	-0.78	0.03	0.47	0.26	1.31	0.76	0.66	-0.32	-0.19	-0.72	-0.58
Smo148055	-0.04	-0.27	-0.07	-0.04	0.23	0.18	0.26	0.62	0.42	0.22	0.2	0.02	-0.32	0.41	0.42	-0.38	-0.42	0.33	-0.15	-0.7	-1.12	-2.35	-0.18	-0.14	-0.06	0.46	0.83	0.67	-0.43	-0.34	-0.82	-0.87
Smo166073	-0.21	-0.51	-0.38	-0.23	-0.16	-0.1	0.02	0.27	0.28	0.24	0.11	0.14	-0.69	0.26	-0.75	-0.27	-1.13	-1.17	0.14	-0.35	-0.29	-2.74	-0.86	-0.76	1.38	0.48	0.56	0.28	-0.45	-0.48	0.72	1.18
Smo169243	0.23	0.27	0.33	0.23	0.1	0.12	-0.16	-0.32	-0.51	-0.5	-0.2	-0.22	-0.57	0.65	0.71	-0.07	-0.14	-0.88	-0.48	0.83	-0.16	-0.6	0.27	0.36	1.09	-0.25	-0.04	0.05	-0.62	-0.46	-0.96	-1.01
Smo170162	-0.58	-0.5	-0.63	-0.37	-0.26	-0.15	-0.28	-0.37	-0.49	-0.5	-0.45	-0.57	0.28	0.96	0.95	0.47	-0.91	-0.84	0.17	0.35	-0.05	-2.43	-0.35	-0.01	1.05	1.11	0.87	0.73	-0.75	-0.61	-0.95	-0.64
Smo187338	0.03	-0.07	-0.24	-0.1	-0.13	-0.01	-0.15	0.03	-0.0	-0.06	-0.14	-0.04	0.37	0.26	0.52	0.24	-0.74	-1.11	0.16	0.16	-0.36	-1.89	-0.32	-0.15	0.28	1.16	0.6	0.56	-0.58	-0.58	-0.38	-0.18
Smo227218	-0.39	-0.36	-0.44	-0.16	-0.14	-0.02	-0.29	-0.07	-0.25	-0.37	-0.36	-0.63	0.53	0.23	0.76	0.46	-0.28	-0.63	0.15	-0.0	-1.15	-1.93	0.2	0.46	0.63	0.69	0.67	0.78	-0.34	-0.26	-0.47	-0.31
Smo233334	-1.0	-0.74	-1.03	-0.36	-0.41	0.01	-0.57	-0.41	0.03	-1.08	-0.58	-0.79	-0.46	0.47	0.82	0.43	-1.12	-1.6	0.32	0.46	0.12	0.39	-1.4	-0.78	1.81	1.44	0.75	0.85	-0.56	-0.39	-1.73	-1.87
Smo2490	-0.75	-0.65	-0.74	-0.39	-0.05	0.3	0.15	0.27	0.1	-0.16	-0.5	-0.66	-0.07	-0.45	0.64	0.43	-0.54	-3.13	0.78	-1.23	-1.04	0.16	0.13	0.14	0.89	0.93	0.94	0.88	-0.29	-0.08	-1.19	-0.88
Smo266933	-0.7	-0.48	-0.12	0.13	0.41	0.4	0.29	0.38	-0.03	-0.33	-0.42	-0.77	-0.49	-0.28	-1.12	-0.56	0.02	-0.7	-0.3	-2.05	-0.37	-2.23	0.04	-0.15	1.28	0.37	0.75	0.75	-0.19	-0.2	0.73	0.69
Smo267292	-0.07	-0.29	-0.32	-0.01	0.07	0.09	0.03	0.07	0.12	0.07	-0.02	-0.08	-0.49	-0.09	0.21	-0.26	0.05	-0.43	-0.02	-0.61	0.45	-1.06	-0.23	-0.18	0.75	0.32	0.75	0.67	-0.06	0.11	-0.63	-0.67
Smo269745	-0.34	0.03	0.19	0.39	0.22	0.19	0.0	-0.03	-0.16	-0.32	-0.31	-0.38	-0.24	-0.59	0.65	-0.0	-0.61	-0.77	0.45	-0.2	0.33	-1.71	-0.09	-0.12	0.91	0.69	0.63	0.81	-0.35	-0.33	-1.05	-1.6
Smo270362	-0.49	-0.57	-0.43	-0.21	-0.1	0.02	-0.03	0.06	-0.03	-0.29	-0.32	-0.5	-0.0	-0.33	0.72	0.18	-0.38	-0.65	0.32	-0.3	0.18	-0.68	-0.12	0.05	1.09	0.58	0.56	0.55	-0.21	-0.05	-0.38	-0.3
Smo404471	-0.7	-0.72	-0.76	-0.55	-0.29	-0.1	0.02	0.01	-0.33	-0.36	-0.47	-0.84	0.63	0.04	0.63	0.11	-0.48	-0.25	0.41	-0.2	-1.18	-2.69	-0.03	0.11	1.17	0.59	1.09	1.07	-0.02	-0.0	-0.52	-0.78
Smo406318	-1.41	-0.09	0.17	-0.15	-2.12	-1.21	-0.91	-0.38	-0.58	-0.07	1.14	-0.15	-0.15	1.45	0.99	-0.55	-1.66	-2.52	-0.67	-1.66	1.0	-	-2.23	-2.12	1.45	1.7	1.48	1.23	-2.34	-2.27	-2.34	-3.33
Smo406352	-0.03	-0.45	-0.23	-0.43	-0.12	0.1	0.29	0.27	0.47	0.47	-0.01	0.37	0.1	-0.13	0.84	0.4	-0.76	-0.69	-0.03	-0.81	0.15	-	-0.58	-0.21	0.56	0.93	0.31	0.47	-0.65	-0.35	-0.78	-0.46
Smo406711	0.06	0.78	0.02	-0.25	-0.14	-0.62	-1.03	-0.99	-0.99	-0.61	-0.82	-0.53	-0.53	0.12	0.11	-0.31	-1.28	-2.03	-0.31	1.04	0.23	-3.64	-0.41	-0.38	2.06	1.39	0.92	1.18	-1.11	-1.05	-1.73	-1.82
Smo407650	-1.81	-4.5	-1.61	-1.76	-2.65	-1.75	-2.19	-2.94	-0.74	-3.49	-1.32	-2.92	-0.7	0.87	1.6	-0.59	-0.57	-1.92	-0.49	1.99	-0.21	1.86	-0.98	-0.9	2.39	1.09	0.32	0.43	-1.34	-0.98	-1.6	-0.86
Smo409077	-0.96	-0.66	-0.8	-0.41	0.22	0.33	0.37	0.28	0.07	-0.2	-0.45	-0.81	0.57	0.21	0.94	0.4	-1.09	-0.69	-0.01	-1.5	-1.31	-1.44	0.1	0.56	0.74	-0.37	1.39	1.11	-0.55	-0.32	-0.95	-1.02
Smo409901	-1.41	-1.64	-1.13	-1.38	-0.66	-1.33	-1.12	-0.07	-0.85	-0.87	-0.89	-0.5	0.06	-0.66	0.48	0.14	-0.53	-1.95	0.08	1.72	0.52	0.02	-0.34	0.12	1.97	1.21	0.52	0.31	-0.33	-0.34	-0.47	-0.61
Smo411520	-0.57	-0.39	-0.09	0.05	0.22	0.17	0.22	0.21	-0.04	0.16	-0.04	-0.18	-0.09	-0.02	0.34	-0.06	-0.06	-2.88	-0.29	0.66	0.5	-1.83	-0.04	0.43	1.36	-0.16	-0.28	-0.33	-0.28	-0.1	-0.48	-0.31
Smo411646	-1.42	-2.3	-4.81	-4.45	-1.64	-0.22	-1.72	-1.25	0.4	-0.7	-1.2	-2.94	-1.61	-2.79	-0.51	-1.26	-1.96	-0.3	0.13	2.07	0.92	-	-0.79	-1.71	2.66	1.17	1.13	1.66	-0.16	-0.16	-2.05	-1.85
Smo413900	-0.32	-0.64	-0.81	-0.78	-0.75	-0.32	-0.4	-0.35	-0.33	-0.27	-0.26	-0.32	0.88	-0.48	0.14	0.99	-0.08	-0.3	0.55	0.73	-0.24	-1.05	0.14	0.1	-0.74	1.21	0.35	0.42	0.02	-0.02	-0.32	-0.22
Smo416293	-0.34	-0.11	-0.14	0.2	-0.11	0.01	0.12	0.12	0.0	0.31	-0.42	-0.2	-0.54	-1.25	-0.43	-0.13	-0.61	-2.67	0.32	1.57	-0.28	-0.02	-0.19	-0.05	2.1	-0.49	-1.0	-0.62	-0.71	-0.18	-0.83	-0.7
Smo417661	-0.2	-0.34	-0.48	-0.46	-0.44	0.39	-0.03	0.02	-0.55	-0.14	-0.42	-0.35	-0.44	-1.32	-0.92	-0.06	-0.54	-1.31	-0.2	0.52	0.3	0.83	-0.47	-0.57	1.83	0.84	0.68	1.24	-0.71	-0.45	-1.67	-1.48
Smo418432	-0.33	-0.31	-0.19	0.07	0.11	-0.07	0.16	0.1	0.16	0.37	0.06	-0.16	-0.44	0.47	0.47	-0.29	-0.27	-0.58	0.05	0.05	-0.19	-1.38	-0.2	-0.01	0.03	0.59	0.67	0.58	-0.19	-0.28	-0.36	-0.33
Smo419773	-0.77	-0.65	-1.24	-0.49	-0.87	-0.57	-0.44	-0.29	-0.16	-0.11	-0.42	-0.59	0.58	-0.15	0.28	0.59	-0.22	-0.78	0.28	0.49	-1.0	-1.38	-0.05	0.22	0.71	1.43	0.59	0.57	-0.32	0.01	-0.0	0.38
Smo419994	-	-	-	-	-	-	-	-	-	-	-	-	-0.9	-0.86	0.74	-0.87	-0.89	-0.2	1.28	2.95	-	2.82	-	0.49	2.29	0.35	-	-	-0.95	-	0.6	-1.03
Smo421161	-0.5	-0.4	-0.99	-0.5	0.14	-0.03	-0.12	0.46	0.24	-0.2	0.18	-0.4	0.08	-1.03	0.78	-0.03	-0.64	-0.28	0.72	-0.92	-1.53	-0.81	-0.11	0.2	0.97	0.64	0.81	0.93	-0.35	-0.04	-0.77	-0.68
Smo426311	-0.56	-0.42	-0.53	-0.2	-0.01	-0.18	-0.4	-0.38	-0.39	-0.52	-0.38	-0.59	-0.25	0.4	0.46	-0.56	-0.64	-0.46	-0.7	0.98	0.4	0.93	-0.32	-0.15	1.83	-0.87	0.78	0.61	-0.98	-0.82	-1.06	-0.44
Smo431632	-1.44	-1.36	-	-2.14	-1.37	-0.15	-0.01	-0.79	0.47	-0.77	-2.32	-1.87	-0.03	-0.72	1.26	-0.04	-0.2	-	1.09	0.77	-	-	0.07	-0.41	1.9	1.03	1.02	1.48	0.01	0.26	-0.31	-0.66
Smo431738	-1.68	-	-1.13	-1.55	-	-1.25	-2.6	-2.81	-2.57	-	-	-	-	1.11	1.62	0.5	-	-0.97	1.15	0.45	1.39	1.06	-1.06	-2.59	1.97	1.72	0.8	2.16	-2.43	-1.68	-	-
Smo439446	-0.47	-0.72	-0.84	-0.43	-0.11	0.16	0.4	0.25	0.29	0.15	-0.02	-0.23	-0.98	-2.09	-0.4	-0.9	-0.4	-0.29	0.59	-1.13	0.01	-1.54	-0.14	-0.15	0.97	0.33	0.54	0.8	0.03	0.18	0.73	0.76
Smo440808	-0.78	-0.51	-0.28	-0.08	-0.05	0.25	0.31	0.55	0.43	0.41	0.34	-0.03	-0.15	0.03	0.31	0.1	-0.72	-1.44	0.1	-0.4	-0.05	-0.85	-0.26	-0.26	1.01	0.81	0.32	0.33	-0.56	-0.5	-0.58	-0.68
Smo441115	-0.19	-0.34	-0.3	-0.33	-0.15	-0.34	-0.55	-0.2	-0.27	0.06	-0.15	-0.04	0.33	-0.02	0.51	0.77	-0.76	-1.43	0.39	0.0	0.54	-1.22	-0.38	-0.1	0.82	0.84	0.46	0.38	-0.2	-0.17	-0.63	-0.22
Smo447840	-0.11	-0.17	-0.09	-0.04	0.03	0.12	0.18	0.36	0.17	0.1	-0.1	-0.25	-0.13	0.07	0.44	-0.03	-0.26	-0.24	0.1	-0.69	-0.86	-1.35	-0.01	-0.0	0.22	0.22	0.76	0.79	-0.27	-0.12	-0.24	-0.32
Smo447844	-0.12	-0.14	-0.18	-0.03	-0.03	0.21	0.12	0.18	0.21	0.18	0.15	-0.01	-0.11	-0.04	0.45	0.05	-0.42	-1.03	-0.45	-0.48	0.5	-0.53	0.1	0.14	0.33	0.54	0.5	0.36	-0.43	-0.32	-0.51	-0.57
Smo67414	-1.83	-1.25	-0.67	0.05	0.51	0.38	0.49	0.51	0.5	-0.05	-0.12	-0.85	-2.35	-1.18	-1.6	-1.13	-0.63	-0.64	0.08	-1.5	-0.14	-5.07	0.23	0.13	1.16	1.27	0.86	0.7	-0.34	-0.22	0.56	0.75
Smo68142	-0.55	-0.36	-0.03	-0.23	-0.27	-0.26	0.02	0.06	-0.09	0.01	-0.15	-0.09	0.44	-0.04	0.16	0.38	-0.63	-0.76	-0.05	0.66	-0.22	-2.06	-0.22	-0.03	0.49	1.19	0.42	0.36	-0.17	-0.14	-0.26	-0.35
Smo75099	-0.14	-0.34	-0.27	-0.32	-0.32	-0.26	0.05	0.16	0.21	0.44	0.27	0.17	-2.04	-1.77	-2.0	-2.02	-0.68	-1.93	-1.31	2.06	1.05	0.23	-1.3	-1.96	2.16	-0.03	-0.28	-0.33	-0.57	-0.55	-0.7	-0.7
Smo76713	-0.84	-0.79	-0.63	-0.23	0.09	0.05	0.09	0.26	0.18	-0.36	-0.3	-0.68	-0.15	0.03	0.64	-0.02	-0.43	-0.6	0.44	-1.16	-0.29	-0.98	0.12	0.27	1.0	0.6	0.95	0.84	-0.34	-0.13	-0.72	-0.25
Smo77448	-0.79	-1.0	-1.12	-0.4	-0.26	-0.02	0.2	0.4	0.28	-0.07	-0.14	-0.5	-0.95	-0.19	0.5	-0.23	-0.18	-0.36	0.8	-0.92	0.02	0.39	-0.24	-0.82	0.82	0.13	0.79	1.09	-0.12	0.01	-0.2	-0.38
Smo78497	0.03	-0.23	-0.0	-0.1	0.07	0.32	-0.11	0.1	-0.23	-0.2	-0.55	-0.57	-0.2	-0.4	0.34	0.02	-0.9	-0.65	-0.0	0.19	0.06	-1.37	-0.54	-0.21	0.97	0.85	1.17	1.15	-0.78	-0.76	-0.72	-0.64
Smo79987	-0.54	-0.67	-0.67	-0.12	-0.07	-0.16	-0.02	0.2	0.1	0.07	0.04	-0.14	-0.33	-0.28	0.33	-0.44	-0.22	-0.76	0.33	-0.24	0.52	-2.95	-0.39	-0.32	0.82	0.92	0.48	0.64	-0.21	-0.19	0.38	0.21
Smo81550	-0.43	-0.4	-0.5	-0.13	-0.11	0.15	-0.14	0.12	-0.04	-0.11	-0.29	-0.3	-0.14	0.25	0.15	0.08	-0.41	-0.32	0.06	0.4	0.08	-0.51	-0.15	0.0	0.76	0.68	0.86	0.61	-0.53	-0.53	-0.46	-0.43
Smo85240	-1.05	-0.59	-0.39	-0.75	-0.2	0.04	0.07	0.41	-0.08	-0.1	-1.19	-1.06	-0.17	-0.17	0.75	0.24	-0.54	-0.82	0.57	-0.51	-0.75	0.59	-0.25	0.19	0.89	0.99	1.02	0.58	-0.33	-0.06	-1.05	-0.56
Smo85367	-0.08	0.19	-0.14	0.11	0.07	0.06	0.09	-0.05	-0.19	-0.28	-0.05	-0.14	0.03	0.12	0.24	0.29	-0.3	-0.99	0.06	0.06	0.18	-0.19	-0.15	-0.02	0.9	0.41	-0.08	0.01	-0.13	-0.14	-0.2	-0.78
Smo85440	-0.41	-0.33	-0.41	-0.28	-0.24	-0.07	-0.15	-0.06	-0.17	-0.33	-0.36	-0.56	0.09	-0.12	0.48	0.18	-0.38	-0.46	0.36	0.43	0.07	-0.02	-0.1	0.07	1.22	-0.17	0.63	0.48	-0.41	-0.37	-0.22	-0.21
Smo85972	-0.34	-0.2	-0.12	0.12	0.13	0.22	0.0	0.22	0.06	0.08	0.03	-0.25	-0.18	-0.08	0.48	0.18	-0.5	-1.17	-0.17	-0.09	0.33	-0.49	-0.18	-0.17	1.02	0.55	0.39	0.62	-0.32	-0.22	-1.13	-1.2
Smo88955	-0.62	-0.53	-0.52	-0.31	-0.24	-0.27	-0.27	-0.32	-0.18	-0.61	-0.34	-0.61	-0.58	-0.26	0.95	-0.28	-0.45	0.12	0.29	-1.07	-0.73	-0.42	0.13	0.07	1.41	0.14	1.04	0.97	-0.17	-0.02	-0.21	0.11
Smo89705	-0.55	-0.78	-0.37	-0.21	0.0	-0.05	0.12	0.34	0.18	0.16	0.0	-0.3	-0.67	0.28	0.4	-0.78	-0.45	-0.38	-0.4	-0.08	0.49	-1.18	-0.84	-1.0	1.31	0.95	0.61	0.55	-0.28	-0.32	-0.27	-0.03
Smo97574	-0.15	-0.11	-0.24	-0.08	0.03	-0.13	0.07	-0.16	0.02	-0.02	-0.14	-0.24	0.0	0.49	0.66	0.09	-0.36	-0.61	0.1	0.37	-0.52	-1.59	-0.3	-0.41	0.91	0.62	0.5	0.53	-0.46	-0.29	-0.55	-0.33
Smo98486	-0.13	0.18	-0.16	0.03	0.24	0.67	0.56	0.61	-0.21	-0.62	-0.92	-0.85	-2.13	-1.65	-1.68	-1.74	-0.52	-0.4	0.02	-2.07	-0.55	-3.39	-0.55	-0.68	1.22	0.18	1.37	1.36	-0.87	-0.75	1.21	0.72

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.