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Heatmap: Cluster_220 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
1.27 0.61 0.98 1.18 1.76 3.86 5.61 4.97 3.81 3.09 1.1 1.26 1.03 0.2 1.81 0.82 1.92 2.92 1.28 4.8 2.86 3.61 1.49 1.06 2.99 1.45 6.45 5.25 2.3 2.77 2.66 1.88
45.2 44.9 46.52 47.28 56.94 72.94 75.68 83.91 67.64 60.87 59.55 49.19 33.52 29.18 38.97 34.95 46.21 44.9 42.05 110.03 85.12 40.25 44.49 42.46 50.89 38.97 80.46 80.42 53.22 55.3 39.47 48.01
48.55 62.33 54.25 72.3 65.82 71.64 62.94 77.22 59.1 66.76 52.54 58.92 9.28 28.81 0.95 17.07 52.04 36.36 40.99 121.65 150.29 2.5 42.71 38.33 278.28 76.35 118.79 124.08 57.09 56.13 39.38 38.09
31.77 33.99 37.17 38.26 37.92 45.54 31.55 30.84 32.72 31.07 24.46 27.67 11.63 13.45 11.49 12.86 27.54 29.11 21.19 66.47 61.28 24.92 20.0 18.47 70.17 17.04 50.35 52.62 24.06 26.09 22.68 25.96
25.12 24.7 22.51 26.12 28.25 30.17 24.27 28.79 28.53 23.9 24.28 21.19 23.29 26.59 24.51 32.29 20.76 20.98 36.19 39.55 27.37 13.56 22.72 24.67 31.74 19.05 17.8 20.76 23.31 24.39 14.99 14.94
34.27 34.33 30.84 25.96 33.72 36.15 37.58 42.96 41.01 40.93 36.28 39.78 6.29 20.31 10.75 12.83 39.51 46.08 31.75 22.51 52.41 43.27 28.05 24.07 33.36 43.22 81.89 91.61 43.43 43.79 48.43 51.69
12.13 10.81 9.25 10.68 17.6 18.98 22.92 17.17 20.51 19.56 14.32 11.01 1.44 2.46 13.75 2.18 14.28 2.53 22.08 64.56 9.98 29.09 6.66 4.65 11.36 8.64 20.13 17.71 13.32 12.75 12.68 13.35
12.13 10.81 9.25 10.68 17.6 18.98 22.92 17.17 20.51 19.56 14.32 11.01 1.44 2.46 13.75 2.18 14.28 2.53 22.08 64.56 9.98 29.09 6.66 4.65 11.36 8.64 20.13 17.71 13.32 12.75 12.68 13.35
36.82 28.14 28.86 30.49 27.95 31.88 36.91 41.78 51.22 48.29 46.76 46.78 38.28 42.35 38.31 39.32 26.37 21.17 48.19 116.5 82.88 41.16 32.9 38.75 77.35 34.43 24.95 20.19 33.65 34.71 47.45 47.35
37.42 29.54 33.24 33.18 43.26 40.32 39.26 55.29 49.39 42.89 45.65 37.26 9.71 20.64 13.49 18.88 29.59 34.98 48.03 26.98 42.32 36.6 20.88 24.93 54.37 60.49 78.73 70.33 39.0 40.08 73.6 58.14
95.73 100.34 79.36 107.35 104.96 105.86 104.52 120.62 121.2 112.32 103.51 114.06 78.65 69.62 60.93 89.61 97.29 71.38 119.34 98.09 157.8 83.32 98.61 91.08 241.22 121.02 98.1 98.64 109.92 104.67 72.28 62.03
96.16 91.2 100.59 109.94 103.86 111.89 106.14 119.59 111.69 112.73 103.01 107.53 95.95 102.42 85.13 82.54 79.5 89.14 103.67 118.49 146.9 79.87 87.38 87.82 214.14 134.22 120.8 115.75 92.91 89.72 51.41 51.3
17.74 17.91 25.14 26.72 34.63 37.67 36.25 47.79 35.95 37.79 27.22 23.36 13.71 8.34 23.62 21.55 28.14 17.84 23.85 44.07 21.99 52.14 23.85 27.82 80.27 43.16 56.06 57.43 30.28 32.48 19.45 23.35
75.84 70.78 74.05 85.46 69.17 91.58 89.55 99.68 91.19 84.94 84.87 78.93 54.78 61.44 73.19 58.41 61.32 40.63 59.68 152.27 115.78 108.3 56.42 53.91 117.9 86.39 69.61 70.18 64.53 62.81 55.47 60.36
72.92 87.27 98.15 82.31 98.82 94.87 89.28 77.38 79.06 64.57 66.96 69.5 44.8 64.6 68.2 57.47 74.95 57.54 66.26 261.17 139.4 136.87 60.75 60.24 162.96 84.37 110.88 99.18 54.06 54.65 50.44 61.63
4.78 6.64 6.56 5.89 4.11 5.63 7.31 8.77 8.4 10.51 9.41 6.83 5.38 3.9 2.58 1.32 1.12 1.14 2.34 27.18 10.54 1.61 3.45 4.4 25.72 13.04 10.19 7.92 1.53 1.51 3.95 3.32
27.39 24.92 21.7 31.35 31.57 28.42 30.36 34.59 33.16 34.53 32.39 29.29 21.97 26.53 43.34 24.59 17.42 10.19 35.03 59.65 33.81 50.62 20.21 26.82 82.07 50.72 49.06 42.26 19.63 21.14 22.57 25.76
1.47 0.66 0.58 1.69 1.73 3.94 5.04 6.87 4.15 4.31 3.52 2.26 0.05 0.16 2.76 0.63 1.65 1.67 0.54 3.45 4.87 1.19 1.2 0.84 2.7 0.75 6.89 3.81 1.96 1.8 1.13 0.94
2.02 2.06 2.3 3.53 2.24 3.25 3.42 3.39 3.28 2.87 2.56 2.33 0.53 1.57 3.44 0.71 0.77 0.75 1.13 9.57 2.35 4.31 0.68 0.74 8.11 2.76 2.91 1.51 0.56 0.78 0.58 0.46
0.46 0.26 0.45 0.21 0.0 1.19 0.56 1.54 0.68 0.8 0.49 0.4 0.08 0.06 0.85 0.0 0.31 0.48 0.15 5.62 1.71 2.88 0.29 0.14 1.72 0.39 3.39 1.85 0.24 0.34 0.43 0.44
23.97 19.91 14.63 22.21 24.96 24.85 27.14 26.49 29.23 28.76 21.95 28.02 37.17 31.88 22.01 35.3 18.7 13.97 24.5 49.07 39.55 7.42 22.23 22.95 24.94 18.49 21.03 20.78 21.4 21.94 22.17 19.5
6.38 5.74 7.12 9.32 8.45 8.94 10.62 10.18 10.7 10.23 8.33 7.93 3.66 3.15 2.38 5.01 8.57 10.11 6.08 31.23 12.79 8.14 9.52 7.91 13.37 12.31 8.4 9.86 7.27 7.92 11.06 14.38
2.39 2.9 2.48 3.38 3.81 3.2 2.98 3.07 2.12 1.69 2.24 2.31 0.55 0.55 2.61 1.41 1.47 0.14 1.8 4.08 2.34 1.39 1.36 1.43 2.97 3.99 5.14 4.22 1.15 1.06 1.22 1.1
7.7 4.22 3.1 5.17 6.2 11.6 14.76 14.5 15.03 14.76 9.06 9.46 1.31 0.68 5.2 2.16 4.36 5.2 10.17 38.97 14.87 6.4 3.75 2.76 12.21 5.95 16.08 13.2 6.68 6.72 6.4 5.54
47.87 43.82 39.7 52.76 65.49 77.83 94.67 102.06 104.03 93.13 73.21 72.49 44.16 43.0 31.02 57.35 50.83 38.92 89.31 77.2 38.44 41.0 59.65 52.83 239.01 108.62 96.21 87.14 64.55 63.63 53.57 56.88
4.72 4.03 3.53 4.93 5.57 5.88 6.29 6.82 7.69 5.96 7.0 5.52 5.13 3.84 7.95 3.92 4.38 4.08 6.17 16.45 7.64 15.38 5.26 5.23 13.58 5.82 6.14 6.03 4.24 5.22 4.73 4.99
1.36 0.8 0.9 1.88 1.95 2.67 2.49 2.74 3.25 1.98 3.54 2.49 0.05 1.07 0.78 0.05 0.6 0.23 0.49 8.99 5.66 0.84 0.49 0.33 4.32 1.79 2.22 0.63 0.8 0.65 0.52 0.35
4.48 5.69 6.89 6.5 6.02 7.84 8.34 8.01 8.82 6.64 6.45 4.53 0.96 3.51 4.03 1.12 2.06 0.5 1.46 17.76 15.07 13.06 2.16 1.48 26.27 6.46 10.48 8.66 1.77 1.59 2.0 1.99
4.08 5.77 6.58 6.35 6.31 5.11 3.83 7.02 4.66 4.04 4.6 4.53 1.2 3.77 3.35 2.13 3.56 0.64 3.53 16.45 1.68 3.04 2.54 2.15 9.51 3.47 6.14 7.2 3.12 3.66 1.34 1.15
26.84 27.32 24.3 25.6 20.14 19.37 21.77 25.96 28.14 28.86 31.38 27.93 19.1 16.38 16.98 25.99 19.05 24.71 26.36 32.38 41.96 21.63 20.25 18.87 74.3 39.0 22.5 20.86 21.47 23.92 13.27 14.06
24.07 24.51 22.39 25.52 26.74 25.38 26.34 26.16 27.36 24.4 22.62 24.64 9.98 9.64 9.24 11.55 16.52 18.97 15.39 24.21 38.17 10.78 19.65 20.59 27.0 25.06 46.57 41.23 14.89 15.04 27.24 30.08
43.4 42.8 44.96 42.61 48.84 43.89 41.73 43.09 42.73 47.04 42.34 39.2 56.47 36.45 50.82 61.07 38.59 28.55 55.01 66.55 114.52 35.09 50.19 58.05 74.12 50.05 54.2 57.5 42.49 46.15 36.7 38.46
10.96 11.0 12.1 12.05 13.59 15.01 17.79 17.05 15.45 16.23 14.67 13.12 2.96 2.83 10.7 2.71 9.63 11.84 7.06 10.41 12.39 7.16 6.3 6.02 17.37 10.13 14.71 15.27 9.2 8.77 9.69 9.52
37.39 29.64 47.26 48.28 43.42 44.21 55.94 75.23 63.52 56.89 59.75 47.65 24.74 20.59 20.27 28.53 30.59 28.04 47.55 189.1 152.01 87.92 32.12 34.17 102.51 47.54 47.3 48.49 49.84 47.63 33.88 18.88
24.69 34.11 37.73 33.58 31.37 28.21 30.73 31.51 29.31 28.54 29.31 25.96 19.82 22.14 10.67 26.98 19.76 18.86 32.21 36.63 37.05 20.49 23.56 25.08 66.7 35.64 27.43 29.57 23.13 21.91 20.14 22.85
7.84 9.16 9.42 9.47 9.99 9.73 9.77 10.94 10.19 9.86 9.78 11.98 4.66 4.85 4.83 6.18 4.64 2.35 11.87 13.87 9.99 5.45 6.24 5.74 49.78 21.83 10.89 10.33 5.51 6.04 1.48 1.36
26.41 21.45 18.32 27.77 39.02 21.01 30.85 32.4 27.61 33.64 34.84 32.49 24.95 16.88 17.05 24.58 22.0 6.08 25.02 57.88 42.37 37.37 24.45 29.6 106.31 70.66 45.18 42.39 23.47 23.94 21.1 23.73
6.38 5.52 5.14 6.41 5.33 6.61 7.04 5.89 6.7 8.02 6.46 6.48 2.14 2.24 5.64 2.39 4.05 6.42 6.31 3.63 12.74 1.48 4.29 4.1 6.93 8.57 10.1 10.01 3.95 4.55 4.41 5.33
9.47 7.77 9.32 8.85 11.32 13.77 11.32 13.71 13.97 10.94 9.42 8.48 8.15 2.24 7.11 8.15 7.36 6.95 6.25 6.81 9.42 6.89 6.9 6.24 7.45 8.1 10.37 10.82 8.82 7.84 3.31 3.35
3.32 4.97 3.57 5.73 8.39 8.59 7.55 7.54 7.66 6.93 4.07 4.89 3.62 1.83 12.16 5.23 5.24 4.17 6.0 13.3 9.5 19.9 4.29 4.82 33.09 9.66 10.15 11.59 5.15 5.45 2.2 2.3
23.36 28.23 28.4 30.74 33.62 35.4 32.61 32.97 30.7 31.98 29.87 27.55 21.24 22.64 22.68 25.7 20.35 12.08 23.45 47.06 30.09 24.35 21.97 21.85 25.61 32.78 34.32 36.52 20.24 18.19 17.77 18.7
19.17 30.13 36.68 46.62 45.18 40.08 34.48 33.32 32.34 33.31 31.13 25.56 33.96 29.14 22.03 35.51 22.94 10.52 26.39 59.15 90.4 11.48 27.32 26.99 65.51 47.93 25.86 28.93 17.39 16.61 11.56 13.04
117.53 128.29 125.71 147.77 132.58 140.07 131.2 170.82 149.47 150.57 146.52 162.85 112.6 140.64 93.33 153.53 84.03 183.98 130.75 289.77 148.17 117.54 127.07 131.4 152.36 138.84 120.86 114.24 102.54 96.98 101.57 124.9
2.51 1.64 1.3 1.87 4.27 8.47 7.08 7.1 6.52 6.29 3.11 2.37 0.43 0.62 2.93 0.76 2.79 3.71 2.35 9.49 12.72 15.82 2.47 2.4 12.17 2.57 9.12 10.18 5.01 5.08 3.59 2.81
2.33 1.11 1.49 1.76 4.25 5.02 6.03 6.12 4.13 4.25 2.84 2.5 0.57 0.44 1.76 0.49 1.24 1.23 1.16 8.89 6.31 0.61 1.41 1.03 4.86 1.48 6.42 8.08 2.42 2.11 3.53 2.38

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)