Heatmap: Cluster_220 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial tissue - Light - ZT1	Aerial tissue - Light - ZT3	Aerial tissue - Light - ZT5	Aerial tissue - Light - ZT7	Aerial tissue - Light - ZT9	Aerial tissue - Light - ZT11	Aerial tissue - Dark - ZT1	Aerial tissue - Dark - ZT3	Aerial tissue - Dark - ZT5	Aerial tissue - Dark - ZT7	Aerial tissue - Dark - ZT9	Aerial tissue - Dark - ZT11	Roots	Root elongation and differentiation zone	Root meristematic zone	Aerial roots and rhizophores	Shoot tips	Microphyll	Strobili	Shoot apical meristem - AC	Shoot apical meristem - Core	Shoot apical meristem - P1	Stem - Top	Stem - Bottom	Whole plant	Aerial tissue - Stress - Dark	Aerial tissue - Stress - High light	Aerial tissue - Stress - Cont	Aerial tissue - Stress - 37C 1h	Aerial tissue - Stress - 37C 3h	Aerial tissue - Stress - 4C 1h	Aerial tissue - Stress - 4C 3h
Smo101549	-0.96	-2.02	-1.33	-1.07	-0.49	0.64	1.18	1.01	0.63	0.32	-1.16	-0.97	-1.26	-3.65	-0.45	-1.59	-0.36	0.24	-0.94	0.96	0.21	0.55	-0.73	-1.23	0.28	-0.77	1.38	1.09	-0.1	0.16	0.1	-0.39
Smo102833	-0.27	-0.28	-0.23	-0.21	0.06	0.42	0.47	0.62	0.31	0.15	0.12	-0.15	-0.71	-0.91	-0.49	-0.65	-0.24	-0.28	-0.38	1.01	0.64	-0.44	-0.3	-0.36	-0.1	-0.49	0.56	0.56	-0.04	0.02	-0.47	-0.19
Smo109814	-0.42	-0.06	-0.26	0.15	0.02	0.14	-0.05	0.25	-0.14	0.04	-0.31	-0.14	-2.81	-1.17	-6.09	-1.93	-0.32	-0.84	-0.67	0.9	1.21	-4.7	-0.61	-0.76	2.1	0.23	0.87	0.93	-0.19	-0.21	-0.72	-0.77
Smo114007	0.01	0.11	0.24	0.28	0.26	0.53	-0.0	-0.03	0.05	-0.02	-0.37	-0.19	-1.44	-1.23	-1.46	-1.3	-0.2	-0.12	-0.58	1.07	0.96	-0.34	-0.66	-0.77	1.15	-0.89	0.67	0.74	-0.39	-0.27	-0.48	-0.28
Smo118133	0.03	0.01	-0.13	0.09	0.2	0.29	-0.02	0.23	0.21	-0.04	-0.02	-0.22	-0.08	0.11	-0.01	0.39	-0.24	-0.23	0.56	0.68	0.15	-0.86	-0.11	0.0	0.37	-0.37	-0.47	-0.25	-0.08	-0.01	-0.71	-0.72
Smo122411	-0.14	-0.14	-0.29	-0.54	-0.16	-0.06	-0.01	0.19	0.12	0.12	-0.06	0.07	-2.59	-0.9	-1.81	-1.56	0.06	0.29	-0.25	-0.75	0.47	0.2	-0.43	-0.65	-0.18	0.19	1.12	1.28	0.2	0.21	0.36	0.45
Smo131706	-0.27	-0.44	-0.66	-0.45	0.27	0.37	0.65	0.23	0.49	0.42	-0.03	-0.41	-3.35	-2.57	-0.09	-2.75	-0.04	-2.53	0.59	2.14	-0.55	0.99	-1.14	-1.65	-0.37	-0.76	0.46	0.27	-0.14	-0.2	-0.21	-0.13
Smo131775	-0.27	-0.44	-0.66	-0.45	0.27	0.37	0.65	0.23	0.49	0.42	-0.03	-0.41	-3.35	-2.57	-0.09	-2.75	-0.04	-2.53	0.59	2.14	-0.55	0.99	-1.14	-1.65	-0.37	-0.76	0.46	0.27	-0.14	-0.2	-0.21	-0.13
Smo146890	-0.19	-0.58	-0.54	-0.46	-0.59	-0.4	-0.18	-0.01	0.29	0.2	0.16	0.16	-0.13	0.01	-0.13	-0.09	-0.67	-0.99	0.2	1.47	0.98	-0.03	-0.35	-0.11	0.88	-0.28	-0.75	-1.05	-0.32	-0.27	0.18	0.17
Smo177860	-0.11	-0.45	-0.28	-0.28	0.1	0.0	-0.04	0.46	0.29	0.09	0.18	-0.11	-2.05	-0.96	-1.58	-1.09	-0.44	-0.2	0.25	-0.58	0.07	-0.14	-0.95	-0.69	0.43	0.59	0.97	0.8	-0.05	-0.01	0.87	0.53
Smo179712	-0.1	-0.04	-0.38	0.06	0.03	0.04	0.02	0.23	0.24	0.13	0.01	0.15	-0.39	-0.56	-0.76	-0.2	-0.08	-0.53	0.21	-0.07	0.62	-0.3	-0.06	-0.18	1.23	0.23	-0.07	-0.06	0.09	0.02	-0.51	-0.73
Smo236221	-0.1	-0.18	-0.04	0.09	0.01	0.12	0.04	0.21	0.11	0.13	-0.0	0.06	-0.11	-0.01	-0.28	-0.32	-0.38	-0.21	0.01	0.2	0.51	-0.37	-0.24	-0.23	1.05	0.38	0.23	0.17	-0.15	-0.2	-1.01	-1.01
Smo266972	-0.84	-0.83	-0.34	-0.25	0.12	0.24	0.19	0.59	0.18	0.25	-0.22	-0.44	-1.21	-1.93	-0.43	-0.56	-0.18	-0.83	-0.41	0.47	-0.53	0.71	-0.41	-0.19	1.34	0.44	0.82	0.85	-0.07	0.03	-0.71	-0.45
Smo35951	-0.03	-0.13	-0.07	0.14	-0.16	0.24	0.21	0.36	0.23	0.13	0.13	0.03	-0.5	-0.33	-0.08	-0.41	-0.34	-0.93	-0.38	0.97	0.58	0.48	-0.46	-0.52	0.61	0.16	-0.15	-0.14	-0.26	-0.3	-0.48	-0.36
Smo405066	-0.24	0.02	0.19	-0.06	0.2	0.14	0.05	-0.15	-0.12	-0.41	-0.36	-0.31	-0.94	-0.41	-0.33	-0.58	-0.2	-0.58	-0.38	1.6	0.7	0.67	-0.5	-0.51	0.92	-0.03	0.37	0.21	-0.67	-0.65	-0.77	-0.48
Smo406816	-0.51	-0.03	-0.05	-0.2	-0.72	-0.27	0.11	0.37	0.31	0.63	0.47	0.01	-0.33	-0.8	-1.39	-2.37	-2.6	-2.57	-1.53	2.0	0.64	-2.07	-0.98	-0.62	1.92	0.94	0.59	0.22	-2.14	-2.17	-0.78	-1.03
Smo410245	-0.25	-0.39	-0.59	-0.06	-0.05	-0.2	-0.1	0.09	0.02	0.08	-0.01	-0.15	-0.57	-0.3	0.41	-0.41	-0.9	-1.68	0.1	0.87	0.05	0.64	-0.69	-0.28	1.33	0.64	0.59	0.37	-0.73	-0.62	-0.53	-0.34
Smo411385	-0.68	-1.83	-2.02	-0.48	-0.44	0.74	1.1	1.55	0.82	0.87	0.58	-0.05	-5.46	-3.85	0.23	-1.89	-0.51	-0.49	-2.12	0.56	1.05	-0.98	-0.97	-1.48	0.2	-1.64	1.55	0.7	-0.27	-0.39	-1.06	-1.33
Smo412211	-0.26	-0.23	-0.08	0.54	-0.11	0.43	0.5	0.49	0.44	0.25	0.08	-0.06	-2.18	-0.62	0.51	-1.78	-1.66	-1.69	-1.1	1.98	-0.04	0.83	-1.84	-1.71	1.74	0.19	0.26	-0.68	-2.1	-1.63	-2.05	-2.39
Smo413556	-0.93	-1.75	-0.99	-2.1	-	0.42	-0.66	0.79	-0.39	-0.15	-0.85	-1.16	-3.51	-3.95	-0.06	-	-1.54	-0.87	-2.52	2.66	0.95	1.7	-1.61	-2.63	0.95	-1.18	1.93	1.06	-1.86	-1.4	-1.06	-1.01
Smo413797	-0.04	-0.3	-0.75	-0.15	0.02	0.01	0.14	0.11	0.25	0.23	-0.16	0.19	0.6	0.37	-0.16	0.52	-0.4	-0.82	-0.01	1.0	0.69	-1.73	-0.15	-0.1	0.02	-0.41	-0.23	-0.24	-0.2	-0.16	-0.15	-0.33
Smo415621	-0.54	-0.69	-0.38	0.01	-0.14	-0.05	0.19	0.13	0.2	0.14	-0.16	-0.23	-1.34	-1.56	-1.96	-0.89	-0.12	0.12	-0.61	1.75	0.46	-0.19	0.04	-0.23	0.53	0.41	-0.14	0.09	-0.35	-0.23	0.25	0.63
Smo421809	0.08	0.36	0.13	0.58	0.75	0.5	0.39	0.44	-0.1	-0.43	-0.02	0.03	-2.04	-2.03	0.21	-0.69	-0.63	-4.05	-0.33	0.85	0.05	-0.71	-0.74	-0.67	0.39	0.81	1.18	0.89	-0.98	-1.1	-0.89	-1.05
Smo424095	-0.21	-1.07	-1.52	-0.78	-0.52	0.39	0.73	0.71	0.76	0.73	0.03	0.09	-2.76	-3.72	-0.77	-2.04	-1.03	-0.77	0.2	2.13	0.74	-0.47	-1.25	-1.68	0.46	-0.58	0.86	0.57	-0.41	-0.4	-0.47	-0.68
Smo424138	-0.56	-0.69	-0.83	-0.42	-0.11	0.14	0.42	0.53	0.56	0.4	0.05	0.04	-0.68	-0.72	-1.19	-0.3	-0.47	-0.86	0.34	0.13	-0.88	-0.78	-0.24	-0.42	1.76	0.62	0.45	0.3	-0.13	-0.15	-0.4	-0.31
Smo425151	-0.44	-0.66	-0.85	-0.37	-0.2	-0.12	-0.02	0.1	0.27	-0.1	0.13	-0.21	-0.32	-0.73	0.32	-0.7	-0.54	-0.64	-0.05	1.37	0.26	1.27	-0.28	-0.29	1.09	-0.13	-0.06	-0.08	-0.59	-0.29	-0.43	-0.35
Smo426805	-0.38	-1.14	-0.98	0.08	0.13	0.59	0.49	0.62	0.87	0.15	1.0	0.49	-5.18	-0.73	-1.18	-5.22	-1.56	-2.97	-1.86	2.34	1.67	-1.08	-1.87	-2.42	1.28	0.01	0.32	-1.51	-1.15	-1.46	-1.76	-2.35
Smo430253	-0.5	-0.15	0.12	0.04	-0.07	0.31	0.4	0.34	0.48	0.07	0.03	-0.48	-2.72	-0.85	-0.65	-2.5	-1.62	-3.65	-2.11	1.49	1.25	1.05	-1.55	-2.09	2.05	0.03	0.73	0.45	-1.84	-1.99	-1.66	-1.67
Smo431594	-0.13	0.37	0.56	0.51	0.5	0.2	-0.22	0.66	0.07	-0.14	0.05	0.02	-1.89	-0.24	-0.41	-1.06	-0.33	-2.79	-0.33	1.88	-1.4	-0.55	-0.81	-1.05	1.09	-0.36	0.46	0.69	-0.52	-0.28	-1.73	-1.96
Smo438379	0.07	0.09	-0.08	-0.0	-0.35	-0.4	-0.24	0.02	0.13	0.17	0.29	0.12	-0.42	-0.65	-0.59	0.02	-0.43	-0.05	0.04	0.34	0.71	-0.25	-0.34	-0.44	1.53	0.6	-0.19	-0.3	-0.26	-0.1	-0.95	-0.87
Smo439621	0.07	0.1	-0.03	0.16	0.23	0.15	0.2	0.19	0.26	0.09	-0.02	0.11	-1.2	-1.25	-1.31	-0.99	-0.47	-0.27	-0.57	0.08	0.74	-1.09	-0.22	-0.15	0.24	0.13	1.03	0.85	-0.62	-0.6	0.25	0.39
Smo440984	-0.18	-0.2	-0.13	-0.21	-0.01	-0.16	-0.24	-0.19	-0.2	-0.06	-0.22	-0.33	0.2	-0.43	0.05	0.31	-0.35	-0.78	0.16	0.44	1.22	-0.49	0.03	0.24	0.59	0.03	0.14	0.23	-0.21	-0.09	-0.42	-0.35
Smo441332	-0.01	-0.01	0.13	0.12	0.3	0.44	0.69	0.63	0.48	0.55	0.41	0.25	-1.9	-1.97	-0.05	-2.03	-0.2	0.1	-0.65	-0.09	0.16	-0.63	-0.81	-0.88	0.65	-0.13	0.41	0.47	-0.27	-0.33	-0.19	-0.21
Smo442465	-0.51	-0.84	-0.17	-0.14	-0.29	-0.27	0.07	0.5	0.26	0.1	0.17	-0.16	-1.1	-1.37	-1.39	-0.9	-0.8	-0.92	-0.16	1.83	1.52	0.73	-0.73	-0.64	0.95	-0.16	-0.17	-0.13	-0.09	-0.16	-0.65	-1.49
Smo442640	-0.2	0.27	0.41	0.25	0.15	-0.0	0.12	0.15	0.05	0.01	0.05	-0.12	-0.51	-0.35	-1.41	-0.07	-0.52	-0.59	0.19	0.37	0.39	-0.47	-0.26	-0.17	1.24	0.33	-0.05	0.06	-0.29	-0.37	-0.49	-0.31
Smo444608	-0.29	-0.06	-0.02	-0.01	0.06	0.02	0.03	0.19	0.09	0.04	0.03	0.33	-1.04	-0.98	-0.98	-0.63	-1.04	-2.03	0.31	0.54	0.06	-0.81	-0.62	-0.74	2.38	1.19	0.19	0.11	-0.79	-0.66	-2.69	-2.81
Smo77082	-0.29	-0.59	-0.81	-0.21	0.28	-0.62	-0.06	0.01	-0.22	0.06	0.11	0.01	-0.37	-0.93	-0.92	-0.39	-0.55	-2.41	-0.36	0.85	0.4	0.21	-0.4	-0.12	1.72	1.13	0.49	0.4	-0.46	-0.43	-0.61	-0.44
Smo85268	0.14	-0.07	-0.17	0.15	-0.12	0.19	0.28	0.03	0.21	0.47	0.16	0.16	-1.44	-1.37	-0.04	-1.28	-0.52	0.15	0.12	-0.67	1.14	-1.97	-0.43	-0.5	0.26	0.57	0.8	0.79	-0.55	-0.35	-0.39	-0.12
Smo88255	0.16	-0.12	0.14	0.06	0.42	0.7	0.42	0.7	0.72	0.37	0.15	0.0	-0.06	-1.92	-0.25	-0.06	-0.2	-0.28	-0.44	-0.31	0.15	-0.3	-0.29	-0.44	-0.18	-0.06	0.29	0.35	0.06	-0.11	-1.36	-1.34
Smo90530	-1.19	-0.61	-1.09	-0.41	0.14	0.18	-0.01	-0.01	0.01	-0.13	-0.9	-0.63	-1.07	-2.05	0.68	-0.54	-0.53	-0.86	-0.34	0.81	0.32	1.39	-0.82	-0.65	2.12	0.35	0.42	0.61	-0.56	-0.48	-1.79	-1.72
Smo91152	-0.21	0.07	0.07	0.19	0.32	0.39	0.27	0.29	0.19	0.25	0.15	0.03	-0.34	-0.25	-0.25	-0.07	-0.41	-1.16	-0.2	0.8	0.16	-0.15	-0.3	-0.3	-0.07	0.28	0.35	0.44	-0.41	-0.57	-0.6	-0.53
Smo92505	-0.75	-0.1	0.19	0.53	0.49	0.32	0.1	0.05	0.01	0.05	-0.05	-0.33	0.08	-0.14	-0.55	0.14	-0.49	-1.61	-0.29	0.88	1.49	-1.49	-0.24	-0.25	1.02	0.57	-0.32	-0.15	-0.89	-0.96	-1.48	-1.3
Smo96367	-0.22	-0.09	-0.12	0.11	-0.04	0.04	-0.06	0.32	0.13	0.14	0.1	0.25	-0.28	0.04	-0.55	0.17	-0.7	0.43	-0.06	1.09	0.12	-0.22	-0.1	-0.06	0.16	0.02	-0.18	-0.26	-0.41	-0.49	-0.43	-0.13
Smo96595	-0.99	-1.6	-1.94	-1.41	-0.22	0.76	0.51	0.51	0.39	0.34	-0.68	-1.08	-3.55	-3.0	-0.77	-2.71	-0.84	-0.43	-1.09	0.93	1.35	1.67	-1.01	-1.05	1.29	-0.96	0.87	1.03	0.01	0.03	-0.47	-0.83
Smo98793	-0.4	-1.47	-1.05	-0.8	0.47	0.71	0.97	1.0	0.43	0.47	-0.11	-0.3	-2.43	-2.82	-0.8	-2.66	-1.31	-1.32	-1.41	1.53	1.04	-2.33	-1.12	-1.58	0.66	-1.05	1.06	1.4	-0.34	-0.54	0.2	-0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.