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Heatmap: Cluster_198 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
22.32 15.85 13.58 17.44 11.75 16.81 20.34 24.21 22.15 24.45 24.71 24.17 12.75 12.4 9.23 15.7 10.04 4.83 17.35 0.99 14.95 1.83 12.23 14.6 20.15 30.9 17.61 16.86 14.0 13.68 12.27 11.87
80.34 68.52 56.72 76.86 73.51 70.38 69.72 82.11 87.87 91.8 85.7 97.01 37.45 54.35 60.35 42.84 31.78 1.67 42.04 13.53 59.13 29.62 35.59 41.47 74.76 108.91 79.55 67.23 29.98 31.08 34.12 34.66
57.78 79.13 113.45 67.32 42.3 40.61 70.38 47.95 66.26 91.11 97.5 98.38 18.36 14.03 10.06 34.77 43.89 76.61 93.36 0.75 63.74 0.0 84.67 81.63 67.59 89.96 31.56 35.77 60.01 54.88 89.12 71.29
12.29 9.71 10.95 10.48 13.28 11.19 9.89 11.22 14.12 14.5 16.11 11.35 1.81 0.94 14.89 2.94 5.98 3.56 3.27 1.9 0.16 0.06 9.23 4.36 0.15 6.84 4.1 5.33 5.4 5.64 6.44 6.75
78.37 71.65 60.79 59.94 57.34 58.24 61.23 55.08 62.13 59.99 56.4 64.54 45.41 61.89 48.95 43.66 47.69 50.18 38.63 9.82 17.01 0.81 42.04 36.66 15.83 45.85 59.06 57.32 42.95 46.01 38.97 44.35
219.06 192.75 163.15 155.73 149.0 135.01 121.53 131.04 132.87 139.31 142.55 154.4 124.93 236.96 159.61 115.11 94.01 80.77 108.13 7.32 15.68 9.19 88.82 87.5 36.2 103.62 124.77 128.68 91.32 97.72 107.84 117.1
67.32 52.0 52.58 55.2 51.63 47.27 48.81 57.98 59.07 70.36 67.81 63.75 45.38 36.95 38.56 35.77 27.53 25.57 35.86 19.48 39.77 18.19 28.47 34.66 47.63 52.27 49.27 47.52 32.91 34.27 47.39 50.02
12.31 11.74 8.43 11.25 10.12 10.12 9.5 12.47 12.42 14.24 15.9 13.94 8.56 12.45 7.53 9.24 5.4 1.02 7.93 0.0 2.99 5.56 6.89 7.09 16.51 20.16 15.4 15.52 6.79 6.37 6.58 8.24
69.2 54.17 42.93 55.3 57.53 62.08 81.27 85.24 96.44 92.99 82.55 95.1 8.46 16.47 16.45 18.74 41.83 7.9 30.26 20.26 27.66 27.97 37.58 30.1 67.74 83.24 58.77 58.95 44.09 46.68 45.43 32.92
14.68 10.13 11.78 11.62 9.6 11.5 10.27 10.6 10.91 14.13 16.31 15.44 6.15 10.48 6.97 6.95 6.71 1.69 6.4 5.78 4.63 2.05 6.21 5.39 10.7 20.99 10.98 10.9 6.07 6.85 7.72 10.08
17.24 11.39 11.15 11.24 11.56 10.55 9.48 10.74 12.09 14.62 16.34 16.94 9.57 11.71 7.27 9.51 8.47 0.76 9.72 6.49 5.69 1.27 7.91 7.79 10.41 19.26 9.19 9.13 8.63 8.62 9.3 13.31
32.82 25.9 21.14 25.5 29.29 24.61 23.27 30.93 30.02 31.77 28.35 31.35 13.35 18.34 15.14 17.21 13.62 3.02 18.04 11.64 10.64 12.01 13.0 13.18 42.34 20.43 16.65 16.79 13.81 13.76 12.35 11.88
236.77 234.87 226.52 238.81 225.03 211.97 261.4 248.83 255.49 278.53 262.36 272.3 181.77 147.59 114.72 197.01 139.84 104.75 184.2 144.12 109.72 48.17 148.61 157.48 307.99 317.21 243.07 272.2 166.25 167.36 132.03 129.06
28.58 25.09 22.9 20.91 20.78 20.5 20.43 21.46 22.44 23.03 22.22 24.25 11.56 14.87 22.61 10.9 12.12 2.81 13.53 4.9 4.71 2.11 10.66 10.19 13.26 12.89 11.53 12.13 13.45 14.75 12.05 13.43
27.84 35.27 42.18 39.97 24.42 37.27 45.89 47.85 36.43 40.33 39.08 42.73 18.43 9.78 7.08 17.59 22.27 42.97 24.21 0.56 15.4 0.0 22.45 20.86 38.41 20.94 19.79 12.79 17.53 22.62 23.2 19.66
42.67 43.55 46.95 48.44 43.67 43.18 41.32 26.44 32.48 37.69 41.73 40.95 7.19 14.24 45.98 15.96 20.91 19.08 17.52 1.21 2.14 7.61 24.67 23.82 0.67 20.5 14.51 19.43 24.59 38.33 19.61 14.56
0.65 0.98 0.86 0.9 0.57 0.52 0.91 0.59 0.63 0.78 0.78 1.14 0.15 0.14 0.12 0.22 0.53 0.37 0.82 0.04 0.22 0.01 0.78 0.89 1.21 0.44 0.38 0.48 0.37 0.41 0.33 0.29
13.53 13.92 6.87 8.4 6.12 6.45 6.79 6.94 8.91 8.63 9.74 12.73 2.74 5.57 3.89 4.96 2.57 2.33 4.63 2.47 2.76 0.63 2.6 3.03 8.93 5.92 7.49 4.16 3.28 3.52 5.65 9.13
11.18 14.58 13.89 13.53 12.81 11.63 13.11 16.57 18.17 20.61 19.75 18.07 13.03 10.1 6.54 9.97 5.94 5.56 8.03 0.3 2.38 2.36 9.62 9.38 21.65 21.48 12.45 14.38 8.54 7.4 6.44 7.67
11.69 8.02 7.27 7.32 8.27 7.68 6.93 8.32 9.03 9.16 9.35 10.41 3.43 4.8 9.72 4.09 4.1 4.18 4.09 2.54 2.32 2.48 5.09 5.87 2.35 6.44 7.33 8.42 4.74 5.21 5.28 5.67
4.41 4.22 4.36 4.6 6.24 5.62 7.63 6.79 8.08 7.76 7.26 6.15 1.98 2.08 8.01 1.95 2.75 1.22 7.44 2.45 2.08 2.83 2.61 2.71 5.35 7.15 4.63 6.35 3.29 3.61 1.41 1.61
19.42 20.63 16.3 19.97 21.88 20.6 24.03 21.14 18.69 21.74 19.94 21.29 14.93 8.27 10.49 11.51 8.67 4.65 11.61 9.7 5.33 7.05 15.42 18.43 25.3 16.93 22.1 23.1 11.43 10.98 8.86 10.82
0.86 0.62 1.11 1.15 0.27 0.88 1.19 1.75 1.15 1.41 1.68 1.07 0.0 0.0 0.05 0.4 0.39 0.91 0.45 0.0 0.18 0.0 0.42 0.48 0.0 0.39 0.1 0.53 0.37 0.65 0.41 0.14
18.01 18.88 20.48 19.24 19.47 21.72 16.77 18.62 22.01 19.2 17.93 17.59 7.4 16.48 9.47 6.56 4.74 5.01 7.77 6.28 20.03 6.46 6.19 5.59 22.19 13.47 14.0 14.44 4.19 4.55 3.08 3.53
2.68 3.77 4.14 3.32 2.73 4.04 4.44 3.45 3.53 4.16 4.26 3.53 1.63 2.51 0.64 1.92 3.76 2.8 2.06 0.12 0.14 0.0 1.61 1.45 1.31 2.15 0.56 1.78 2.23 2.32 1.94 1.79
151.14 110.11 108.15 100.77 100.51 82.9 90.06 81.14 102.53 98.65 114.5 112.59 38.24 87.6 57.35 39.69 55.36 25.69 67.11 0.0 0.8 0.1 44.83 38.36 4.02 57.72 64.86 68.86 48.92 57.84 98.59 82.96
4.08 5.13 2.77 4.54 3.86 3.39 3.77 5.87 5.45 6.46 4.88 5.25 2.49 1.92 2.96 2.68 1.66 1.58 2.8 0.04 1.85 0.15 1.79 1.64 5.37 3.56 2.95 2.0 2.28 1.82 1.48 2.19
33.85 27.43 28.18 29.72 27.69 25.18 25.11 30.33 34.14 36.4 37.0 34.34 22.17 23.73 18.34 21.17 10.86 2.79 16.17 13.88 11.78 8.11 18.49 19.66 31.78 29.91 17.9 15.32 10.68 12.2 15.43 19.51
5.48 4.77 3.81 5.1 5.01 5.0 5.75 6.7 6.58 6.49 5.98 6.21 0.2 0.41 0.48 0.2 0.53 0.55 0.57 1.79 5.86 2.57 0.33 0.13 11.22 8.16 5.16 6.0 0.33 0.28 0.41 0.28
10.91 9.18 9.57 7.11 7.57 9.94 9.47 9.65 9.38 12.18 11.13 9.43 5.55 9.17 9.78 5.16 4.26 1.22 4.12 2.23 7.08 0.22 4.97 5.09 11.09 11.88 10.96 9.16 3.52 4.03 3.78 4.1
2.45 2.42 2.47 3.2 2.4 2.01 2.9 2.93 2.7 2.0 3.02 2.18 0.12 0.41 0.4 0.52 1.22 1.39 2.03 0.7 0.0 0.0 2.01 1.39 4.87 1.71 2.77 5.78 0.98 0.96 0.69 0.66
74.1 66.27 62.9 52.36 48.44 45.86 48.53 39.37 49.29 56.37 63.38 60.01 20.32 48.2 63.24 30.98 36.46 36.51 26.72 3.03 2.95 1.82 29.26 25.57 1.77 20.5 14.49 13.55 29.73 32.79 27.75 24.13
57.82 58.64 59.21 64.92 49.23 47.86 64.47 64.75 56.91 58.39 54.89 63.31 47.86 34.75 29.27 43.19 29.4 14.43 41.63 18.44 43.19 26.55 48.06 48.88 75.12 35.29 36.04 30.64 36.01 35.87 33.29 38.69
106.32 89.94 70.21 69.67 71.23 63.73 85.96 97.63 94.7 98.64 95.99 106.07 63.85 80.56 59.11 63.94 37.61 27.68 49.66 9.73 41.83 4.72 32.15 27.48 141.4 62.47 97.43 88.89 51.35 51.51 31.18 27.59
170.88 146.38 132.12 139.3 130.65 138.74 168.27 204.39 216.55 236.85 214.72 225.71 72.04 53.4 45.05 82.71 71.77 6.46 65.45 32.17 87.65 42.45 82.45 87.91 222.92 245.16 135.14 124.57 93.23 85.56 60.17 50.09
37.59 34.56 33.0 31.59 30.42 27.56 29.67 25.73 27.5 29.83 30.67 34.31 20.48 23.51 24.34 21.68 18.23 7.03 20.45 20.12 9.78 9.37 20.94 20.76 36.21 19.57 27.33 26.23 17.33 19.49 20.59 23.01
51.29 46.62 32.6 39.31 30.02 28.03 29.15 32.1 36.83 36.67 44.59 50.35 17.13 27.82 17.06 30.51 13.7 0.48 19.46 16.98 37.15 11.33 15.42 16.1 47.95 32.16 38.63 22.62 16.27 17.31 36.87 53.96
86.46 67.36 51.77 72.32 71.31 77.72 73.29 100.77 115.62 112.55 106.43 104.65 31.28 26.92 40.57 35.62 40.13 15.47 38.33 25.15 51.48 50.84 45.35 48.91 99.32 79.05 63.89 56.7 43.49 43.2 41.56 34.27
44.16 44.33 43.04 39.65 33.6 33.91 39.36 39.03 40.76 44.15 45.53 41.4 22.21 34.26 41.91 23.54 20.9 12.31 8.9 4.84 5.59 8.17 15.81 12.94 20.49 18.08 27.93 30.09 20.89 22.54 47.22 34.7
26.93 29.03 28.64 28.07 28.85 25.33 23.99 29.96 28.9 31.31 31.51 30.13 18.97 17.71 17.39 19.06 15.21 7.75 19.75 14.07 15.77 13.35 17.43 17.26 37.22 26.62 23.28 20.64 15.45 15.51 16.76 16.92
45.91 49.17 42.93 40.94 38.87 41.72 40.18 44.83 55.46 54.79 51.99 51.46 27.16 27.63 24.3 29.43 24.32 2.86 33.77 14.44 27.08 21.71 27.06 29.4 57.16 60.18 36.15 38.77 25.27 26.55 21.48 19.66
7.57 6.04 4.28 5.88 5.51 6.98 7.46 8.53 9.38 9.61 10.22 9.62 1.66 2.07 1.47 2.96 2.71 1.63 2.24 3.91 3.31 5.66 3.08 3.89 8.27 12.25 5.34 5.68 3.0 3.31 3.06 2.79
79.02 91.43 82.62 84.74 70.8 83.03 65.76 65.94 73.92 74.42 80.96 81.99 40.5 75.27 44.19 51.56 63.07 43.16 37.04 26.96 41.97 17.52 72.71 65.0 103.48 51.28 58.4 68.28 44.4 49.39 39.4 41.5
17.21 20.38 13.73 13.47 13.36 12.52 13.72 12.8 13.3 12.86 13.02 15.77 7.77 6.11 2.09 18.29 6.81 1.15 7.48 3.51 1.32 2.33 6.54 4.57 16.23 13.92 11.58 7.62 8.83 8.57 5.02 3.69
27.35 29.94 30.02 28.44 28.12 28.51 35.78 39.81 36.88 37.66 34.57 32.94 19.71 20.69 23.82 20.5 18.19 16.51 22.41 16.51 15.33 19.39 19.24 18.09 37.42 33.95 27.88 27.26 19.14 18.75 17.39 19.79
23.67 23.26 22.05 20.15 25.14 21.1 18.93 18.34 20.12 19.45 19.46 19.08 13.15 16.24 24.25 15.71 13.87 14.81 17.55 2.29 3.71 6.91 12.44 10.89 1.27 9.27 12.89 13.41 12.82 12.89 10.64 13.01
29.71 28.5 29.25 26.96 29.56 27.77 25.28 21.34 28.99 29.36 26.88 22.93 17.19 16.27 17.67 16.73 15.27 12.25 10.2 13.29 16.4 2.47 13.59 14.0 33.45 16.05 17.01 21.23 13.01 12.31 10.96 9.67
17.47 17.95 19.8 16.9 19.06 17.4 18.12 15.11 17.54 21.5 23.61 17.58 10.96 12.03 16.97 10.41 14.31 11.85 10.99 6.14 1.33 6.81 13.08 13.7 2.37 11.36 9.6 13.25 12.47 15.27 10.72 11.85
56.88 60.02 65.67 53.37 49.95 51.47 48.35 46.5 54.43 61.03 59.62 57.08 16.24 9.06 70.12 29.79 10.43 10.22 7.29 2.19 12.54 0.0 19.0 20.11 0.66 70.83 48.55 50.26 11.7 14.32 8.62 6.55

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)