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Heatmap: Cluster_204 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
30.33 32.34 37.14 33.32 43.73 38.91 43.98 41.27 40.49 36.72 37.14 32.0 26.3 23.28 130.86 31.26 28.28 25.82 31.09 170.04 36.74 78.66 29.52 30.0 27.56 26.33 32.5 32.48 29.39 33.68 19.84 22.62
92.33 75.49 78.88 76.69 101.15 88.28 106.77 118.86 130.04 126.58 116.7 108.84 84.45 92.18 115.53 90.64 65.24 71.79 87.18 425.09 161.83 95.56 77.21 86.13 82.88 134.02 86.55 72.13 71.35 71.82 77.21 87.68
9.1 8.49 8.79 9.45 8.57 10.89 11.19 5.97 9.82 7.41 8.11 5.72 3.33 1.1 26.96 4.14 27.75 12.6 5.75 45.48 3.36 26.17 3.82 3.06 3.85 1.06 2.94 5.19 13.92 14.01 3.98 2.78
8.59 8.43 8.39 8.47 9.02 11.15 11.02 9.91 11.82 11.03 9.62 9.23 6.87 7.35 13.88 8.33 5.0 3.89 6.69 34.07 3.52 17.36 6.96 8.16 5.2 8.04 7.65 7.37 6.42 6.82 5.61 5.34
2.96 3.23 5.55 5.05 5.24 4.73 6.7 2.47 4.62 4.31 4.43 3.81 6.21 5.53 44.88 7.27 5.81 2.75 6.76 18.18 6.01 13.47 3.49 2.35 5.42 3.11 5.07 3.99 5.3 7.14 5.09 4.99
122.27 115.73 131.46 115.48 115.02 138.57 112.05 105.93 113.81 125.85 117.78 109.4 278.08 393.6 550.59 270.92 146.34 188.21 221.42 773.85 340.62 715.6 153.45 179.08 148.98 67.1 51.07 53.81 132.71 138.03 110.95 145.47
97.32 91.05 99.23 93.92 101.15 102.18 93.09 95.72 110.05 89.48 99.83 84.37 260.42 349.62 544.3 231.69 113.18 122.72 164.59 725.16 194.31 462.66 139.47 155.21 179.76 158.15 103.8 93.46 101.36 108.83 97.82 101.41
27.64 33.71 35.74 36.62 37.64 39.75 42.94 38.5 43.98 37.41 41.48 36.99 22.97 17.97 163.87 24.6 39.44 30.88 47.85 138.69 64.03 137.98 34.94 33.48 62.01 23.71 41.96 42.29 30.93 31.89 31.32 39.18
85.87 75.91 83.32 93.38 93.37 88.55 98.38 116.86 117.83 127.15 116.2 105.21 136.14 185.58 265.7 150.01 83.93 65.71 130.38 313.42 184.16 249.83 83.06 98.7 110.22 198.99 99.38 101.78 101.66 105.59 87.23 84.0
25.81 31.82 35.17 39.19 41.48 40.23 42.34 44.46 39.0 39.32 34.03 30.13 31.1 40.39 63.68 33.02 20.83 14.29 27.23 90.85 12.06 30.97 24.35 25.87 30.86 36.38 46.19 48.48 21.04 23.08 20.75 20.96
66.42 65.47 71.68 67.93 64.86 75.85 64.81 57.72 60.59 60.4 64.46 52.55 55.75 52.02 150.94 44.98 59.05 39.43 42.57 230.71 47.68 112.7 53.55 56.88 58.3 51.33 52.41 59.54 47.55 55.04 38.34 31.06
5.27 6.63 5.1 5.51 5.26 4.55 4.26 5.11 6.42 6.31 5.56 5.28 2.64 2.85 30.03 1.85 4.34 2.61 4.82 10.73 6.96 1.66 1.97 0.83 2.81 3.25 3.4 4.44 2.76 2.93 3.4 3.49
9.82 9.91 9.21 10.55 12.59 14.13 13.81 11.34 13.9 9.09 10.27 8.53 3.56 12.73 43.87 13.63 9.81 10.44 6.35 24.9 12.43 25.31 5.29 5.08 13.77 5.46 10.19 11.36 8.66 10.16 4.43 4.36
0.46 0.96 0.64 2.04 0.22 1.48 0.97 1.08 0.54 0.23 0.74 0.85 0.68 0.2 13.01 1.06 1.3 0.05 0.33 4.47 0.88 11.96 0.1 0.09 0.77 0.35 0.93 0.33 0.78 1.03 0.18 0.0
161.95 189.47 163.07 178.06 164.52 175.6 132.49 129.7 133.11 151.62 136.52 139.43 270.37 313.55 340.79 206.89 132.44 172.65 138.69 398.95 256.06 402.02 195.81 216.57 142.32 78.28 80.02 95.14 112.76 119.9 113.36 135.75
16.14 14.62 13.49 15.54 21.91 21.24 17.43 19.04 19.61 15.71 16.86 13.1 17.23 11.39 71.9 14.82 10.19 21.79 19.24 59.41 12.22 20.85 10.68 15.18 12.52 16.25 20.32 17.22 11.62 13.53 15.83 23.06
14.64 15.16 15.5 17.27 17.98 21.29 18.41 11.29 16.82 16.5 14.62 13.31 11.62 5.98 103.93 15.48 21.72 15.46 6.24 67.23 19.03 49.68 1.79 1.84 3.31 2.86 5.89 7.6 10.79 13.1 8.12 7.52
0.75 0.7 0.44 0.54 0.45 0.89 0.79 0.28 0.24 0.35 0.84 0.42 0.57 0.16 3.76 1.31 0.37 0.18 0.41 4.18 1.11 2.2 0.08 0.13 0.31 0.12 0.16 0.56 0.19 0.18 0.25 0.21
4.87 5.27 5.77 5.15 6.5 6.46 5.75 5.72 6.04 4.71 5.48 4.31 7.67 7.57 31.03 7.86 2.55 2.83 8.06 14.07 12.55 23.84 3.71 3.93 5.18 3.99 6.39 9.65 2.85 3.28 1.67 1.87
2.26 2.67 3.1 2.3 2.28 2.96 3.4 2.78 4.47 3.65 2.65 2.12 3.92 2.59 38.97 4.42 4.75 5.45 1.05 26.45 6.01 14.18 1.24 0.94 1.83 1.48 1.26 1.98 2.93 1.85 1.5 1.0
6.82 7.05 8.24 7.76 8.85 8.56 10.33 9.6 11.3 9.72 7.7 7.75 11.93 12.52 26.12 12.13 8.1 8.13 11.93 37.16 13.41 22.41 11.43 13.47 5.52 10.84 14.26 12.39 8.07 9.3 8.5 11.98
1.35 1.04 1.44 2.19 2.03 2.17 1.94 1.08 2.07 1.77 1.43 0.89 1.28 0.66 11.6 1.48 1.61 0.51 1.86 3.45 1.21 0.13 0.19 0.56 0.0 0.24 0.31 1.1 0.72 0.79 0.58 0.45
0.01 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.3 0.1 1.38 0.18 0.03 0.0 0.25 0.28 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.08 0.03 0.03 0.03
2.85 3.12 3.64 3.6 3.97 4.69 5.36 3.35 5.09 4.03 4.54 3.05 3.97 2.46 55.47 4.07 5.73 4.29 2.12 55.14 4.59 20.68 0.62 0.38 2.62 0.88 2.32 3.14 2.37 2.5 1.36 0.83
17.54 17.74 19.72 20.1 26.8 30.02 27.55 29.73 24.56 24.91 20.53 18.69 23.6 19.16 38.82 24.45 14.29 13.89 23.42 76.75 21.32 31.3 17.06 19.55 18.22 29.0 39.24 39.47 15.62 17.81 13.94 14.06
2.84 3.3 3.37 4.18 3.33 3.28 2.91 2.32 2.59 2.43 2.71 2.2 2.43 1.99 22.13 3.73 4.56 4.33 4.78 13.51 5.98 5.54 3.95 5.13 3.48 1.72 3.54 2.83 2.79 2.68 12.15 8.48
12.78 10.09 10.67 12.73 10.68 15.36 14.12 13.71 12.61 13.35 10.74 9.25 8.42 15.23 27.12 9.34 6.96 5.22 6.71 54.13 9.54 52.73 7.42 7.78 11.42 5.55 8.9 8.99 6.46 7.08 3.28 3.08
0.28 0.55 0.15 0.18 0.23 0.33 0.27 0.16 0.44 0.29 0.26 0.35 0.69 0.43 2.29 0.98 0.73 1.6 0.79 3.97 0.19 2.0 0.39 0.48 0.91 0.84 0.75 1.31 0.67 0.7 0.11 0.4
1.69 1.84 2.16 2.53 2.83 2.82 3.03 2.06 3.67 2.5 2.53 1.72 1.41 0.42 16.91 1.64 2.98 1.92 0.93 3.43 1.56 10.06 0.32 0.22 0.44 0.78 1.08 2.13 1.42 1.8 0.78 0.68
10.27 12.38 13.9 14.45 11.33 14.26 14.83 11.21 15.45 12.51 12.51 12.26 6.25 7.74 35.87 9.31 11.53 9.09 4.28 35.72 3.98 23.02 2.94 4.18 2.24 8.14 6.08 8.33 7.34 7.24 4.24 4.1
2.71 2.81 2.68 4.64 5.38 5.37 5.08 5.25 4.32 3.94 3.5 2.97 2.36 1.84 7.39 2.41 0.99 0.62 0.61 20.92 2.31 1.15 0.88 0.87 1.72 5.12 6.86 10.14 0.89 1.08 0.7 0.41
8.62 7.4 10.04 9.46 10.66 10.38 9.3 8.03 9.26 8.3 7.15 6.18 6.58 2.57 32.83 7.3 8.46 6.52 4.31 9.09 1.17 12.44 2.7 3.42 5.43 5.56 7.88 8.21 4.35 4.78 3.26 2.93
4.48 4.13 5.21 6.34 6.94 9.71 8.99 8.07 5.4 6.32 4.4 3.61 11.11 9.4 37.79 11.19 6.94 8.06 12.78 79.69 8.02 32.1 7.27 8.95 16.35 11.19 19.68 16.45 5.93 7.87 5.65 6.47
19.15 22.4 10.14 24.11 13.14 16.96 21.66 20.02 13.16 13.94 13.8 19.19 88.08 137.11 359.73 99.46 78.95 52.27 99.75 314.65 176.44 289.18 72.86 77.08 122.04 69.51 80.52 66.3 63.89 63.02 67.31 68.89
6.8 6.92 8.46 10.13 11.18 11.52 12.34 7.68 11.26 10.03 9.4 7.65 4.01 2.99 65.26 6.01 14.57 7.12 2.81 35.69 11.53 24.19 0.68 0.83 6.26 2.03 4.4 4.82 6.09 7.9 5.43 3.24
4.04 3.54 3.85 2.11 3.3 1.87 1.83 1.14 1.71 1.89 4.01 3.73 0.61 5.18 14.64 1.93 4.12 7.72 10.21 19.82 5.08 6.5 0.91 1.3 1.36 2.12 2.51 2.1 3.54 3.05 0.84 1.47
27.2 25.93 29.88 30.93 32.22 36.8 33.42 37.6 36.87 33.37 32.84 26.24 32.23 45.73 65.35 35.73 24.24 16.53 29.64 92.9 31.74 65.23 32.06 35.43 23.44 31.35 32.8 33.33 23.51 24.0 18.69 22.55
5.19 6.41 7.64 7.4 7.83 8.38 9.19 5.76 6.51 6.01 6.37 5.77 2.87 1.84 30.07 5.68 7.62 3.99 8.99 40.97 3.77 10.06 2.78 1.8 4.62 5.09 4.56 5.36 5.8 6.92 3.02 2.95
5.61 7.2 8.05 8.83 11.4 11.74 11.35 11.43 10.69 9.73 7.88 6.39 5.72 5.78 17.09 6.7 4.92 2.99 9.15 46.31 10.97 8.76 4.52 4.88 8.43 10.79 11.67 12.99 5.36 6.15 2.16 1.77
666.8 604.13 702.33 580.7 663.84 719.24 698.61 693.14 628.56 550.79 570.15 498.32 1209.07 1166.51 927.8 1910.12 1021.58 968.3 1506.12 2413.56 1434.08 2393.54 759.55 1248.76 943.35 274.11 343.01 322.55 989.48 1102.83 955.85 972.54
36.02 36.5 40.78 37.87 45.01 44.64 38.99 35.81 30.94 30.89 29.17 27.57 49.06 44.21 126.55 58.59 36.74 32.44 62.66 86.08 17.77 51.52 37.27 39.21 50.31 48.38 48.68 48.23 38.49 39.47 28.1 29.42
30.1 32.28 27.39 35.13 28.55 32.14 30.1 31.68 29.08 30.64 31.14 27.96 27.36 57.77 59.95 24.91 21.61 20.01 30.43 85.99 49.57 63.08 24.12 24.6 40.5 26.4 22.89 22.14 19.13 19.63 15.98 16.27
50.03 51.07 46.73 48.77 61.95 55.2 64.48 72.8 97.4 85.32 78.65 73.08 185.66 204.62 262.93 234.38 65.79 78.4 125.23 400.5 190.19 394.07 180.35 284.13 66.05 87.86 64.98 54.22 111.94 129.25 160.21 178.6
0.76 1.31 1.77 1.37 2.77 1.32 0.92 0.69 1.31 0.51 0.97 1.28 0.74 0.26 7.41 1.11 1.77 1.3 0.76 23.44 1.71 3.87 0.28 0.21 0.29 0.59 0.72 0.44 0.87 1.29 0.44 0.31
4.79 4.16 3.99 4.25 4.15 5.68 5.17 5.84 4.73 5.9 4.78 4.97 2.3 3.91 7.28 2.68 1.94 0.69 3.72 19.32 6.6 4.05 1.8 2.13 3.72 3.96 5.04 3.94 2.04 2.32 2.48 2.45
3.61 2.57 4.11 3.58 3.17 2.65 2.35 2.97 2.9 2.88 2.82 2.42 7.96 7.3 6.52 8.75 3.39 6.06 6.31 13.19 3.87 8.62 4.52 5.87 10.94 8.62 6.58 8.49 3.28 4.03 2.43 3.09
5.84 6.0 6.38 7.27 8.27 7.04 5.87 6.05 4.98 6.88 5.38 5.82 8.55 8.05 15.26 9.63 5.23 5.29 9.02 16.83 11.58 7.06 6.51 6.24 12.54 7.97 8.42 10.05 5.52 6.18 4.72 5.32
7.36 7.33 9.02 9.16 7.52 10.17 9.43 6.22 7.45 6.54 7.52 5.43 3.73 1.09 45.64 6.19 9.06 4.08 1.45 27.59 7.25 28.18 0.98 0.72 5.12 0.73 3.4 7.24 3.98 5.98 3.53 2.64
1.24 2.05 1.88 2.36 2.03 2.95 2.29 1.81 1.19 1.56 1.16 1.79 3.07 7.15 20.53 2.24 1.1 0.52 5.46 11.43 0.58 3.12 0.94 0.97 2.78 1.96 3.2 3.98 0.76 0.94 0.89 0.88
21.08 22.57 22.77 21.28 22.6 22.64 20.2 17.93 23.96 23.14 21.49 20.95 3.93 2.42 49.49 10.0 12.64 9.12 12.06 52.01 13.09 54.96 3.33 3.56 0.88 5.71 5.42 7.66 8.02 12.38 8.91 8.06

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)