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Heatmap: Cluster_92 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00272650 (evm_27.TU.AmTr_v1.0_scaffold00001.549)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 11.41 0.0
0.3 1.05 1.87 11.25 0.98 0.6 0.0 0.43 0.04 0.05 0.96 0.43 0.55 0.32 0.3 0.29 0.6 5.03 1.17 1.04 11676.9 0.19
AMTR_s00012p00184400 (evm_27.TU.AmTr_v1.0_scaffold00012.115)
 23.91 17.54 24.87 58.15 41.59 11.95 0.29 52.47 0.51 0.44 0.22 0.39 0.18 0.73 0.53 0.0 0.23 0.86 0.26 0.67 1534.9 0.13
AMTR_s00012p00184530 (evm_27.TU.AmTr_v1.0_scaffold00012.116)
 0.0 2.92 10.99 7.63 6.76 8.15 0.02 4.06 0.06 0.12 0.71 0.21 1.58 1.17 1.87 1.53 2.99 0.97 0.24 2.02 779.13 1.02
AMTR_s00019p00029530 (evm_27.TU.AmTr_v1.0_scaffold00019.8)
 0.0 0.96 1.85 2.69 0.67 0.0 0.06 0.39 0.55 0.31 2.32 0.26 0.22 0.2 0.32 0.0 0.18 0.46 0.66 0.25 36.18 0.08
8.61 7.95 8.79 0.84 6.46 0.0 0.0 0.0 0.0 0.0 0.51 0.0 0.31 0.58 0.78 1.18 0.4 3.05 1.36 3.99 2508.3 0.09
45.22 36.89 68.21 319.72 77.66 4.11 0.54 16.7 0.48 0.98 1.76 2.4 6.67 7.41 5.39 7.3 17.73 4.2 2.34 39.06 5332.89 4.26
AMTR_s00028p00130230 (evm_27.TU.AmTr_v1.0_scaffold00028.44)
 9.14 18.02 7.69 1.95 17.25 0.25 0.04 3.06 0.01 0.02 0.15 0.52 0.07 0.38 0.4 0.7 0.37 0.0 0.66 1.05 517.86 0.37
AMTR_s00034p00235600 (evm_27.TU.AmTr_v1.0_scaffold00034.118)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.64 0.0
AMTR_s00055p00210620 (evm_27.TU.AmTr_v1.0_scaffold00055.152)
 0.0 0.0 0.0 0.0 0.27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.0 0.23 0.0 0.0 0.0 0.0 0.0 24.52 0.0
70.25 46.73 79.53 1077.54 87.91 6.75 0.31 30.82 0.4 0.5 4.11 9.5 7.46 9.36 6.0 8.18 50.32 6.81 4.85 44.41 7838.16 6.89
68.9 50.1 72.96 110.1 148.2 1.64 0.31 14.93 0.35 0.41 2.19 2.8 1.69 2.93 3.56 3.78 6.62 6.36 5.16 25.76 10561.6 1.73
AMTR_s00065p00190870 (evm_27.TU.AmTr_v1.0_scaffold00065.166)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.68 0.0
AMTR_s00072p00125230 (evm_27.TU.AmTr_v1.0_scaffold00072.64)
 94.51 120.27 162.72 1021.71 323.38 8.37 2.1 343.89 1.33 1.4 12.01 2.94 2.69 5.79 15.62 3.97 25.69 10.29 3.61 13.35 11847.6 3.87
100.77 72.55 88.57 67.98 86.1 3.29 0.26 11.01 0.23 0.2 4.78 1.47 1.18 2.15 2.83 3.52 9.06 12.38 5.2 18.06 9151.27 0.93
AMTR_s00082p00133500 (evm_27.TU.AmTr_v1.0_scaffold00082.30)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.24 0.0
AMTR_s00083p00097430 (evm_27.TU.AmTr_v1.0_scaffold00083.24)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.37 0.0
54.78 55.28 31.3 3.36 55.16 0.4 0.03 10.57 0.1 0.03 2.07 1.17 0.39 1.1 1.81 0.0 9.12 3.95 1.63 6.66 2520.74 0.14
AMTR_s00093p00066420 (evm_27.TU.AmTr_v1.0_scaffold00093.16)
 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 13.01 0.0
AMTR_s00102p00106890 (evm_27.TU.AmTr_v1.0_scaffold00102.59)
 38.93 14.02 27.19 269.91 52.43 3.38 0.15 160.83 0.19 0.16 3.14 2.6 1.69 5.03 4.88 2.53 9.88 24.73 15.02 33.88 17238.2 1.8
AMTR_s00102p00108130 (evm_27.TU.AmTr_v1.0_scaffold00102.61)
 2.93 1.43 0.0 15.35 1.35 0.0 0.03 1.86 0.02 0.02 0.29 0.43 0.16 0.54 0.38 0.65 1.01 0.47 0.22 0.66 171.42 0.32
AMTR_s00102p00108730 (evm_27.TU.AmTr_v1.0_scaffold00102.62)
 4.25 0.0 7.03 5.56 16.57 9.39 0.0 26.12 0.09 0.1 1.01 0.9 0.88 1.27 1.72 0.0 4.58 0.79 0.8 3.62 1585.05 0.97
AMTR_s00106p00134900 (evm_27.TU.AmTr_v1.0_scaffold00106.104)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.06 6.37 0.0
AMTR_s00140p00081000 (evm_27.TU.AmTr_v1.0_scaffold00140.36)
 0.98 6.38 11.27 37.5 23.55 0.15 0.05 19.03 0.15 0.16 2.4 1.3 1.26 1.49 1.56 1.5 7.23 2.63 1.76 4.21 3440.51 0.92
AMTR_s00159p00066740 (evm_27.TU.AmTr_v1.0_scaffold00159.26)
 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 2.8 0.0
1.4 2.59 3.79 22.05 1.77 3.08 0.02 7.88 0.14 0.09 0.1 0.0 0.14 0.2 0.2 0.24 0.55 5.27 0.7 0.88 10315.4 0.19
3.42 5.67 8.91 148.74 2.62 1.49 0.0 5.68 0.0 0.0 0.42 0.58 0.23 1.47 1.36 1.08 0.87 8.97 1.52 9.11 37297.1 0.1
0.18 0.18 0.32 3.72 0.24 0.0 0.0 0.98 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.22 0.0 0.07 383.14 0.0
2.21 3.22 6.89 52.93 3.25 1.31 0.03 2.36 0.05 0.01 1.63 0.94 0.3 1.29 1.71 0.53 0.96 13.54 3.08 9.46 30392.9 0.17
AMTR_s00334p00011530 (evm_27.TU.AmTr_v1.0_scaffold00334.2)
 4.35 2.7 3.92 451.52 23.71 6.73 0.1 12.37 0.35 0.25 1.88 1.28 0.71 1.88 2.52 6.63 4.11 2.61 1.28 5.34 6247.49 1.03
13.37 14.95 26.67 19.47 23.06 16.02 0.07 9.38 0.1 0.13 1.16 1.11 0.72 1.83 1.43 2.34 2.88 4.26 1.56 7.79 5936.11 0.8
AMTR_s00343p00004460 (evm_27.TU.AmTr_v1.0_scaffold00343.1)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 30.63 0.0
AMTR_s00343p00010490 (evm_27.TU.AmTr_v1.0_scaffold00343.3)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 17.48 0.0
1.44 2.2 3.52 18.97 0.75 8.04 0.01 2.97 0.01 0.03 0.65 0.93 0.11 0.25 0.33 0.89 0.39 8.21 1.3 1.64 24725.8 0.14
19.84 20.81 14.52 13.36 24.01 6.14 0.01 5.98 0.03 0.1 1.24 0.94 0.32 0.52 1.12 0.21 2.61 2.79 1.17 4.93 1531.33 0.36
17.6 6.7 36.86 64.14 83.44 0.55 0.22 7.13 0.1 0.17 2.29 0.0 1.07 3.91 5.56 5.27 9.6 6.83 4.62 10.61 9666.49 1.54
AMTR_s00390p00012910 (evm_27.TU.AmTr_v1.0_scaffold00390.4)
 1.64 3.1 1.52 4.15 3.34 2.94 0.03 2.68 0.03 0.07 0.15 0.1 0.05 0.16 0.25 0.15 0.33 0.19 0.05 0.51 209.22 0.08
AMTR_s00390p00014170 (evm_27.TU.AmTr_v1.0_scaffold00390.5)
 6.62 15.08 7.54 43.95 12.55 3.48 0.0 5.2 0.02 0.03 0.52 0.21 0.12 0.5 0.82 0.7 1.96 0.18 0.18 1.18 525.11 0.17
AMTR_s00456p00012010 (evm_27.TU.AmTr_v1.0_scaffold00456.1)
 0.0 0.01 0.13 0.08 0.02 0.06 0.0 0.03 0.0 0.04 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.04 0.0 12.92 0.0
AMTR_s00543p00012290 (evm_27.TU.AmTr_v1.0_scaffold00543.3)
 12.4 2.46 45.67 115.13 20.73 0.0 0.0 11.18 0.0 0.48 0.8 0.0 0.9 1.28 2.41 1.99 5.49 0.0 2.61 2.07 4708.39 1.31
AMTR_s00585p00000100 (evm_27.TU.AmTr_v1.0_scaffold00585.1)
 24.91 15.71 9.4 38.33 40.98 1.97 0.03 1.78 0.05 0.09 0.55 0.22 0.8 1.15 3.47 2.29 1.93 2.86 2.34 8.67 2769.54 0.6
AMTR_s00585p00011490 (evm_27.TU.AmTr_v1.0_scaffold00585.3)
 35.62 14.7 2.91 66.95 18.02 0.7 0.03 22.29 0.0 0.06 0.0 0.0 0.45 0.79 2.04 1.47 0.72 0.0 0.0 1.64 552.75 0.39
AMTR_s00606p00000120 (evm_27.TU.AmTr_v1.0_scaffold00606.1)
 0.0 12.81 8.64 31.32 9.49 11.81 0.28 4.14 0.74 0.66 8.25 3.08 5.3 5.24 4.71 4.22 8.72 6.8 4.4 4.94 2773.57 1.64
AMTR_s00606p00006850 (evm_27.TU.AmTr_v1.0_scaffold00606.2)
 11.53 7.56 2.65 90.25 12.84 0.0 0.41 10.08 0.4 0.42 3.49 6.45 1.75 5.33 6.99 6.77 7.24 27.95 5.85 22.14 54186.8 1.07
AMTR_s00626p00011520 (evm_27.TU.AmTr_v1.0_scaffold00626.1)
 1.25 0.45 0.0 3.97 0.34 0.0 0.0 0.76 0.03 0.04 0.2 0.0 0.08 0.13 0.09 0.44 0.13 0.0 0.04 0.15 45.52 0.05
81.5 66.42 76.5 26.94 68.05 39.34 0.13 7.47 0.16 0.15 1.86 1.41 0.69 1.14 1.38 1.47 6.48 6.17 2.81 8.3 5775.22 0.39
AMTR_s01196p00010070 (evm_27.TU.AmTr_v1.0_scaffold01196.2)
 13.56 9.23 16.23 164.5 59.48 13.03 0.07 11.16 0.09 0.17 2.38 2.07 1.73 3.42 4.68 1.49 5.74 12.79 17.11 31.99 7675.47 0.74
AMTR_s01499p00009870 (evm_27.TU.AmTr_v1.0_scaffold01499.1)
 14.32 5.98 9.68 18.62 9.51 0.0 0.12 6.07 0.17 0.24 0.86 1.3 0.7 1.31 1.35 1.56 1.92 1.01 0.74 1.08 681.82 0.42
AMTR_s02490p00007250 (evm_27.TU.AmTr_v1.0_scaffold02490.1)
 20.88 15.22 21.49 225.68 41.75 6.87 0.41 94.06 0.53 0.25 3.61 0.0 1.05 4.15 4.11 6.16 4.17 4.43 0.85 7.14 7518.39 1.97
106.15 85.5 142.46 2634.98 152.27 13.52 0.85 78.4 0.45 1.25 17.54 9.81 15.73 16.76 11.08 19.9 84.26 19.33 18.71 78.56 21637.2 14.19
AMTR_s04036p00005710 (evm_27.TU.AmTr_v1.0_scaffold04036.1)
 20.1 15.42 11.69 128.28 90.31 10.61 0.33 19.29 0.25 0.27 1.2 8.5 2.72 9.19 11.47 2.87 8.0 24.19 15.49 69.72 19002.8 2.91
AMTR_s04720p00006570 (evm_27.TU.AmTr_v1.0_scaffold04720.2)
 0.0 0.0 0.0 1.07 0.68 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.18 26.22 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)