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Heatmap: Cluster_187 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial tissue - Light - ZT1
Aerial tissue - Light - ZT3
Aerial tissue - Light - ZT5
Aerial tissue - Light - ZT7
Aerial tissue - Light - ZT9
Aerial tissue - Light - ZT11
Aerial tissue - Dark - ZT1
Aerial tissue - Dark - ZT3
Aerial tissue - Dark - ZT5
Aerial tissue - Dark - ZT7
Aerial tissue - Dark - ZT9
Aerial tissue - Dark - ZT11
Roots
Root elongation and differentiation zone
Root meristematic zone
Aerial roots and rhizophores
Shoot tips
Microphyll
Strobili
Shoot apical meristem - AC
Shoot apical meristem - Core
Shoot apical meristem - P1
Stem - Top
Stem - Bottom
Whole plant
Aerial tissue - Stress - Dark
Aerial tissue - Stress - High light
Aerial tissue - Stress - Cont
Aerial tissue - Stress - 37C 1h
Aerial tissue - Stress - 37C 3h
Aerial tissue - Stress - 4C 1h
Aerial tissue - Stress - 4C 3h
23.87 24.74 25.89 27.55 34.57 40.23 25.16 31.16 17.32 19.62 16.96 16.28 29.74 82.47 27.82 45.9 34.31 34.37 49.01 21.61 60.29 22.44 41.21 46.0 38.12 42.22 68.6 56.79 33.58 33.05 13.81 14.98
72.57 82.02 80.8 98.18 92.45 92.26 103.77 102.45 118.97 106.37 96.41 86.07 125.24 210.84 180.12 133.41 97.19 89.99 90.1 121.89 76.02 118.27 138.26 131.38 90.12 121.29 117.48 107.4 86.77 96.61 132.69 138.23
13.95 19.54 20.35 19.33 15.27 19.05 16.14 16.09 13.67 16.4 17.58 13.87 55.54 56.93 59.69 49.21 21.98 12.85 26.8 26.14 19.43 26.43 24.34 28.19 47.48 56.58 55.41 54.36 17.48 20.35 11.55 9.72
8.78 7.89 5.85 6.98 6.67 6.82 9.55 8.67 8.18 8.79 9.03 10.62 14.45 13.82 24.13 21.62 16.44 11.56 18.18 11.71 7.2 4.82 17.69 17.69 9.25 13.13 10.34 9.16 15.36 18.17 10.54 10.76
11.68 16.27 14.76 19.54 20.21 22.98 18.09 18.8 15.93 23.89 13.49 13.79 47.88 23.52 21.66 41.79 28.0 34.19 50.54 54.35 8.55 9.06 36.78 31.24 33.55 29.38 20.0 21.76 35.47 36.55 21.74 16.1
3.7 2.8 1.61 2.54 4.88 3.75 0.78 2.86 2.88 2.34 4.95 2.46 5.14 2.64 4.6 6.45 3.58 3.14 6.78 0.0 0.0 0.0 3.59 2.74 0.59 4.95 5.63 5.97 3.4 2.89 8.39 13.45
26.49 31.72 23.2 28.03 28.35 27.0 21.52 22.14 27.4 30.87 21.11 24.21 49.37 44.34 70.48 55.11 26.56 17.82 45.3 69.86 28.05 15.5 30.6 38.22 59.11 39.98 48.7 45.85 24.61 25.48 33.61 38.09
105.36 144.46 133.21 124.75 132.55 130.88 145.8 109.31 137.13 135.3 133.24 116.65 114.75 196.18 163.31 152.04 81.1 136.33 175.37 105.3 193.37 43.7 211.2 218.0 88.31 105.4 119.09 140.23 83.44 92.73 64.49 90.75
56.15 61.69 85.06 59.08 100.18 86.14 94.79 95.33 69.97 66.17 95.84 47.93 121.93 193.4 221.7 141.39 74.59 5.97 87.75 191.72 65.65 110.25 83.97 95.73 107.96 118.37 95.8 100.84 73.1 75.73 80.82 94.36
24.33 22.7 20.77 21.14 22.05 24.95 23.27 26.59 36.04 36.28 34.13 31.44 67.67 122.07 68.44 91.95 33.04 61.32 64.02 13.97 42.57 24.86 37.64 49.06 35.14 40.0 22.14 21.21 43.21 44.9 37.59 39.33
13.71 19.68 16.58 14.4 19.55 21.74 22.95 10.93 17.47 26.86 15.03 24.15 192.42 117.13 108.84 207.04 91.67 166.36 151.82 108.32 26.2 54.19 114.21 133.68 33.85 30.12 31.41 32.22 105.66 93.4 67.73 78.47
4.58 4.67 3.81 4.41 5.48 4.23 4.75 4.58 4.12 3.96 5.01 4.51 15.38 15.25 16.93 16.24 3.84 0.7 12.51 5.6 1.12 10.66 5.61 6.02 5.71 15.37 13.95 15.94 4.42 5.62 2.73 1.96
7.72 8.92 9.82 8.83 6.71 9.69 8.74 7.57 7.59 7.07 6.75 5.33 4.78 3.37 7.54 5.43 7.57 10.96 6.19 0.0 0.33 1.62 7.6 5.79 1.43 4.67 8.88 9.12 5.99 6.73 4.01 4.37
64.26 68.89 72.77 68.59 78.05 81.13 82.53 72.75 67.25 64.69 59.11 49.25 109.21 77.63 108.05 118.93 86.55 79.76 115.51 199.88 86.72 64.9 97.05 94.19 98.37 108.23 157.13 164.51 90.52 91.0 65.21 66.43
72.45 58.36 57.15 58.85 67.86 65.17 58.49 70.14 77.82 74.25 84.72 65.81 125.1 217.85 196.51 111.5 51.82 42.87 94.84 22.34 28.22 21.47 118.45 159.62 123.21 178.73 140.83 128.86 59.21 68.87 66.89 90.66
0.18 0.0 3.55 3.45 10.09 0.58 2.68 1.52 4.14 3.88 4.4 1.04 19.1 16.29 15.22 27.98 9.73 4.14 16.45 0.0 0.0 0.0 16.37 15.91 0.0 3.92 3.85 1.94 13.34 16.13 15.09 16.88
30.58 33.14 35.85 35.26 36.19 37.83 31.69 35.28 39.61 37.64 35.11 31.18 53.6 62.93 72.77 62.31 35.41 41.14 58.12 50.48 17.07 34.5 53.61 55.36 28.83 67.05 41.47 38.61 38.23 40.75 32.66 36.15
96.66 109.59 103.96 90.75 127.18 109.4 115.51 87.67 105.36 97.04 73.02 85.79 557.97 657.54 300.32 541.47 216.47 300.33 409.26 175.19 286.03 139.43 338.85 397.85 241.64 79.35 106.37 79.3 259.41 250.2 223.09 229.88
78.69 77.44 78.3 86.7 90.72 84.64 82.92 69.24 80.17 74.16 70.42 65.05 105.62 219.34 209.72 91.28 64.67 62.71 113.06 47.43 74.81 47.69 125.01 207.15 187.94 107.22 161.52 177.78 58.95 77.78 55.04 73.18
5.78 5.72 2.77 6.39 5.46 7.63 4.7 4.54 4.75 4.89 5.56 4.18 7.31 21.13 18.13 8.23 8.54 22.33 18.85 11.32 2.16 2.11 11.33 9.48 13.68 10.2 6.18 3.57 6.59 8.78 11.51 12.54
51.38 50.88 53.18 44.77 48.96 48.29 45.39 55.28 53.94 51.5 49.54 48.56 113.28 168.1 157.93 133.79 58.14 77.71 128.03 102.35 49.47 91.31 82.31 100.65 123.2 225.31 223.7 160.2 65.68 62.77 68.27 122.5
76.14 73.42 65.77 71.7 75.84 74.96 62.94 61.04 60.74 56.76 55.73 51.96 95.98 130.51 143.82 92.31 75.44 78.33 128.87 23.91 18.69 21.57 76.24 99.13 125.65 142.02 117.81 108.76 58.5 62.17 58.41 86.26
1.27 1.68 4.24 1.09 1.83 4.84 0.0 0.0 3.99 0.08 2.0 1.7 3.96 2.87 7.58 5.75 10.43 3.22 8.22 0.0 2.11 0.0 9.01 4.27 10.11 8.53 20.35 16.48 2.4 2.88 1.22 1.53
66.13 68.85 64.5 70.53 65.1 70.83 66.71 91.49 80.52 73.69 80.11 74.26 152.06 177.13 194.51 157.18 92.07 131.93 128.08 89.47 84.87 71.2 116.7 131.17 57.45 118.66 87.42 90.0 109.83 108.65 80.97 93.83
50.14 54.67 49.17 58.49 78.61 77.01 55.72 51.61 49.69 49.62 45.31 41.86 206.48 150.13 170.85 256.84 96.96 69.5 105.02 0.29 63.01 2.22 121.76 106.89 120.64 58.11 52.95 58.39 109.97 106.12 61.1 74.01
87.67 59.29 37.55 43.12 47.73 65.22 43.56 60.81 46.53 53.31 73.0 41.15 1583.6 2478.37 162.51 808.2 86.47 363.12 318.98 24.79 60.11 12.06 672.63 2791.74 229.76 119.84 76.81 51.35 246.08 369.93 211.69 310.13
54.76 53.03 85.16 58.8 74.13 68.77 72.2 48.67 41.58 44.67 47.77 33.41 109.67 71.12 133.62 132.11 105.57 151.09 114.99 0.0 0.0 0.0 118.11 119.68 1.59 64.9 141.78 139.98 106.58 111.45 104.23 100.35
72.41 73.83 57.56 65.03 92.47 90.1 70.9 79.61 52.58 51.91 50.16 43.12 80.04 71.73 121.49 95.62 73.31 96.19 106.32 56.42 8.28 46.53 76.99 93.07 64.03 87.31 146.96 105.27 63.62 59.38 126.37 155.65
11.57 11.67 11.27 13.36 13.71 14.3 12.42 14.22 14.32 11.91 14.19 11.17 19.91 43.34 41.34 40.09 10.46 12.57 23.38 30.22 13.53 23.09 14.48 16.95 28.05 29.45 24.54 19.0 14.44 16.03 10.47 11.77
0.32 0.23 0.59 0.45 0.43 0.1 0.24 0.23 0.32 0.24 0.48 0.24 1.09 0.56 0.9 1.0 0.52 0.49 1.42 0.06 0.0 0.11 0.76 0.94 1.0 0.28 1.12 1.33 0.83 0.62 0.4 0.36
0.14 0.06 0.02 0.03 0.0 0.0 0.0 0.1 0.08 0.0 0.03 0.03 0.52 0.03 0.0 0.18 0.13 0.0 0.32 0.0 0.0 0.0 0.35 0.37 0.61 0.28 0.46 0.17 0.21 0.06 0.12 0.21
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.45 2.79 4.51 3.81 1.53 0.56 2.0 5.03 0.0 2.77 1.3 1.2 6.78 3.42 1.66 0.63 0.82 1.16 0.57 0.67
66.64 68.99 90.18 80.18 78.15 90.79 81.91 87.92 80.61 61.37 65.13 62.56 99.96 90.98 154.02 125.55 120.21 93.64 155.53 31.99 9.94 24.0 134.52 140.51 24.27 90.89 153.09 170.68 116.9 124.11 93.81 79.61
1.88 2.05 2.85 1.49 0.62 4.04 3.26 3.62 3.24 3.42 3.27 2.51 11.88 6.85 6.57 3.37 2.44 9.41 2.3 3.71 10.4 0.74 2.22 2.11 12.34 5.99 9.26 6.95 3.02 3.43 2.01 1.79
3.53 3.97 5.89 5.94 6.14 5.63 5.04 4.72 3.59 3.84 5.21 3.92 14.43 12.68 14.63 11.94 5.31 1.42 15.07 4.13 1.13 3.05 8.25 7.25 2.17 11.31 12.69 12.88 4.66 5.4 4.13 3.64
13.73 20.71 7.6 11.63 9.33 9.86 10.53 15.56 7.21 11.2 13.78 13.66 63.88 79.32 82.4 106.1 33.01 94.88 85.93 62.24 3.55 18.37 45.74 47.94 17.9 109.36 91.4 50.9 52.53 43.36 46.43 50.3
54.28 48.57 47.72 50.28 54.38 54.32 57.83 54.99 64.93 55.06 53.52 51.88 83.17 146.8 124.33 123.74 81.53 111.69 121.37 9.1 32.28 21.88 90.64 94.34 44.5 117.35 149.4 133.26 98.44 116.6 100.2 144.19
18.14 17.93 28.52 10.34 28.8 28.32 22.23 33.32 29.16 16.61 32.68 10.34 36.87 53.04 49.0 49.0 14.43 0.0 29.86 24.07 49.65 7.57 63.69 88.42 17.25 10.95 4.9 6.28 18.16 26.46 15.78 18.16
9.61 8.12 9.36 13.35 13.16 17.54 17.81 22.35 17.24 15.5 11.67 12.04 72.23 11.79 30.94 34.85 8.28 8.59 12.87 26.59 25.68 31.17 11.7 13.12 61.52 19.75 29.73 22.94 9.86 11.49 7.05 8.32
17.36 17.17 16.54 20.4 19.48 19.77 24.59 22.44 24.47 21.01 17.66 17.0 19.19 24.25 31.32 20.96 19.07 25.21 23.49 24.21 18.98 31.47 17.34 18.11 13.9 15.06 35.92 30.47 19.96 20.45 15.98 16.42
1.06 0.69 1.15 1.97 2.01 1.87 1.19 2.03 1.85 0.98 1.02 1.61 10.94 10.8 16.75 11.88 5.96 8.14 10.19 2.09 8.77 0.68 8.12 7.21 4.34 16.64 18.05 16.38 8.22 8.42 9.56 12.82
0.03 0.0 0.0 0.08 0.0 0.25 0.0 0.0 0.25 0.0 0.0 0.0 3.07 1.67 1.36 2.65 1.74 0.93 3.31 0.0 0.57 0.0 2.9 4.02 0.55 0.12 0.62 1.5 1.85 2.33 2.17 2.24
2.42 3.56 2.4 3.09 3.18 3.48 3.75 3.25 2.86 2.39 2.86 2.23 2.83 2.74 5.34 5.39 3.67 1.96 6.09 0.0 0.11 0.0 4.37 5.27 2.8 3.79 7.36 8.63 3.9 3.95 1.39 0.98
1566.37 1295.55 1030.96 951.71 915.21 855.28 974.85 991.71 1175.21 1541.77 1358.43 1257.95 7696.13 9587.29 4853.72 5068.06 2791.49 4695.4 1183.35 1619.09 546.54 1268.3 7011.97 8475.23 1355.36 983.7 1587.73 1022.92 3617.86 3917.39 8584.13 7171.47
70.79 67.74 60.39 82.43 75.68 87.33 84.27 80.85 76.63 74.71 73.0 69.3 94.54 97.67 137.85 110.06 82.58 78.8 108.46 104.53 39.28 36.89 86.77 92.2 135.09 75.44 80.28 81.26 87.65 82.97 76.44 75.37
5.33 6.94 7.0 6.84 7.69 7.82 7.5 7.82 6.44 6.29 5.94 5.74 22.57 8.83 14.6 17.36 4.13 3.93 8.53 10.35 3.03 6.25 6.02 7.96 14.55 9.09 9.43 10.29 4.73 5.26 3.89 4.28
9.6 9.33 10.65 12.78 15.66 20.08 22.92 18.56 19.29 18.71 15.77 13.27 11.41 30.02 19.5 23.79 15.0 17.83 19.54 2.32 29.09 13.78 24.44 27.13 7.98 16.12 29.02 29.23 14.61 15.85 14.74 15.73
132.28 138.95 100.85 127.99 99.87 112.53 103.95 117.04 123.91 147.77 138.65 157.77 490.2 615.7 283.56 437.76 124.52 321.49 306.37 290.42 190.52 243.64 269.16 367.91 95.12 136.44 92.74 69.49 183.74 188.99 248.83 305.58
3.18 3.9 1.07 3.04 9.67 2.23 3.6 1.62 4.87 2.56 2.23 3.19 268.72 317.88 300.73 252.9 173.84 102.56 238.43 45.83 40.66 33.5 231.13 239.13 64.59 148.83 130.94 112.62 185.66 179.84 213.52 245.41
13.33 15.38 15.24 17.12 18.09 18.17 17.15 18.53 16.6 15.73 14.53 12.9 29.29 22.56 32.9 31.51 16.03 13.47 30.89 29.19 19.98 21.07 23.43 26.93 42.99 26.34 25.6 24.87 18.47 19.46 16.15 19.24
16.45 19.93 16.36 10.76 8.07 14.82 17.71 12.95 6.71 10.02 4.38 9.69 29.88 6.17 22.34 32.81 18.03 24.92 36.54 0.0 0.0 0.0 20.75 18.82 10.03 25.22 21.92 33.98 23.9 22.83 19.21 10.33
9.01 10.73 14.03 16.12 11.53 15.83 16.04 13.15 16.58 11.54 12.47 7.43 12.15 22.79 29.06 15.26 11.63 15.18 20.4 14.76 3.8 18.63 11.52 12.68 13.93 20.16 23.18 29.22 8.34 11.38 8.19 9.71
34.12 33.97 33.12 27.81 37.6 30.53 25.03 22.91 20.82 21.26 19.96 21.98 51.54 59.06 62.19 55.08 38.1 52.63 60.95 5.25 36.77 16.81 44.25 45.77 71.13 49.59 75.66 64.68 35.8 36.04 38.74 41.58
0.18 0.2 0.17 0.11 0.0 0.0 0.35 0.24 0.18 0.24 0.0 0.0 1.33 1.95 1.27 1.23 0.44 2.79 1.79 0.0 1.73 0.0 1.06 0.92 4.4 1.53 1.41 3.99 1.16 0.29 0.72 0.48
28.23 26.42 22.1 27.22 30.82 33.18 17.45 17.32 30.32 32.13 29.16 30.75 43.98 52.49 62.47 68.22 29.09 44.15 53.21 12.44 50.08 3.07 35.32 41.23 41.77 83.93 55.0 36.36 37.7 37.73 22.91 34.27
21.8 33.69 31.63 28.43 24.86 28.87 26.51 22.95 24.09 16.71 16.95 20.33 30.1 20.22 39.0 29.11 28.26 49.86 27.62 5.0 0.0 0.0 31.85 25.02 0.91 19.52 36.78 39.39 24.27 19.43 24.06 24.76
12.67 17.26 14.39 18.59 18.67 20.4 20.71 22.51 18.74 18.49 14.83 14.75 26.02 13.72 27.43 31.42 16.04 7.46 23.88 11.35 19.23 23.86 18.09 20.6 37.6 17.2 17.09 17.48 14.38 15.32 10.91 10.65
107.09 98.45 92.52 97.6 93.99 110.07 104.38 105.56 122.37 123.88 122.29 122.07 205.11 292.26 175.55 204.05 119.11 171.05 166.34 80.43 146.22 103.34 162.33 176.5 145.71 78.39 45.49 41.12 144.22 138.51 114.15 141.28
33.6 35.5 34.92 34.92 34.53 40.96 36.97 35.88 34.64 36.39 36.29 33.05 87.03 75.49 70.6 69.71 44.18 53.22 61.68 11.66 38.34 22.51 53.54 59.03 35.52 18.76 23.85 17.98 47.13 49.13 40.87 45.27
2.4 4.15 3.83 4.0 4.67 4.14 5.0 3.46 2.58 2.47 2.13 1.73 3.51 4.31 9.85 5.3 4.1 3.45 7.21 5.79 0.15 4.1 2.35 2.25 7.49 1.98 2.97 1.81 2.99 3.36 1.58 1.43
51.42 49.02 38.84 35.14 39.95 42.5 35.04 44.61 54.28 49.53 48.26 54.64 158.65 169.42 161.34 157.61 56.05 55.13 107.25 110.81 72.78 6.73 95.43 98.34 146.44 190.13 121.13 106.89 87.63 78.81 56.65 61.02
44.56 42.24 42.54 43.11 48.57 39.86 33.31 42.08 43.03 39.43 40.62 34.51 66.87 73.35 107.16 77.88 33.95 22.37 52.55 50.73 31.68 4.78 47.3 56.77 89.88 60.3 48.86 44.47 35.97 41.68 32.41 32.37
153.07 161.43 153.57 146.22 135.14 162.71 140.54 113.89 122.04 114.73 111.35 112.45 118.67 99.67 187.85 118.09 126.79 188.0 145.32 0.45 0.55 0.0 91.68 99.1 0.91 79.66 109.5 114.48 122.81 124.69 121.85 134.1
117.41 115.51 103.14 101.96 133.35 112.6 141.34 115.11 128.86 127.27 153.41 136.12 219.4 160.56 287.98 329.57 198.7 335.04 286.58 161.78 0.0 6.32 190.97 201.03 40.79 302.36 389.77 376.13 283.95 256.26 328.58 368.73
87.18 96.57 100.49 106.93 125.12 110.27 106.92 94.58 116.62 100.33 107.11 86.71 214.97 237.2 278.02 252.68 128.07 142.29 195.15 114.01 152.34 59.12 144.92 188.16 168.39 126.88 95.34 88.57 128.04 159.76 111.59 146.28
45.21 44.78 49.07 55.56 52.2 63.32 49.01 63.13 60.0 53.84 44.85 47.11 73.36 85.82 82.64 86.66 58.39 72.36 90.46 54.44 87.67 40.56 68.27 63.84 61.94 79.85 96.9 91.82 57.97 62.67 48.09 51.11
27.18 28.72 24.61 30.56 30.38 34.81 37.08 41.64 39.3 33.0 37.82 28.93 53.42 31.86 31.18 87.49 60.59 91.15 84.51 41.35 21.74 16.68 62.39 59.45 51.45 46.6 24.59 20.78 73.03 75.81 44.77 32.48
5.04 4.86 5.58 7.25 9.2 8.58 7.95 9.19 9.17 7.83 7.01 5.53 10.74 4.31 14.6 12.12 7.96 10.29 12.19 9.1 0.8 5.5 12.47 12.4 12.31 10.65 25.15 24.79 8.0 10.23 14.63 10.59

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)