Heatmap: Cluster_200 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00127350 (evm_27.TU.AmTr_v1.0_scaffold00002.84)
- - - - 3.58 - - - 3.32 - - - - - - - - - - - - -
AMTR_s00004p00244560 (evm_27.TU.AmTr_v1.0_scaffold00004.238)
- - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00005p00110340 (evm_27.TU.AmTr_v1.0_scaffold00005.29)
- - - - - - 2.46 - 3.09 3.0 - - - - - - - - - - - -
AMTR_s00009p00129100 (evm_27.TU.AmTr_v1.0_scaffold00009.73)
- - - - -0.51 - - - 3.19 3.48 - - - - -0.03 - - - - - - -
AMTR_s00012p00055520 (evm_27.TU.AmTr_v1.0_scaffold00012.16)
- - - - 3.56 - - - 3.36 - - - - - - - - - - - - -
AMTR_s00012p00156030 (evm_27.TU.AmTr_v1.0_scaffold00012.93)
- - - - 0.79 - - - 3.11 2.66 - - - 1.65 1.13 - - - - - - -
AMTR_s00012p00214500 (evm_27.TU.AmTr_v1.0_scaffold00012.155)
- - - - 0.97 - 3.33 - 1.17 1.94 - - - -0.28 1.6 - - - - - - -
AMTR_s00014p00175360 (evm_27.TU.AmTr_v1.0_scaffold00014.60)
- - - - 3.02 - 2.77 - 1.72 1.91 - - - - - - - - - - - -
AMTR_s00019p00190310 (evm_27.TU.AmTr_v1.0_scaffold00019.210)
- - - - 2.21 - - - 3.38 2.8 - - - - - - - - - - - -
AMTR_s00022p00165560 (evm_27.TU.AmTr_v1.0_scaffold00022.171)
1.58 - - - - - - - 3.79 1.03 - - 0.4 - - - 0.47 - - - - -1.2
AMTR_s00025p00043160 (evm_27.TU.AmTr_v1.0_scaffold00025.22)
- - - - 3.62 - - - 2.52 - - - - - 2.0 - - - - - - -
AMTR_s00027p00232720 (evm_27.TU.AmTr_v1.0_scaffold00027.116)
- - - - - - - - 4.46 - - - - - - - - - - - - -
AMTR_s00028p00104720 (evm_27.TU.AmTr_v1.0_scaffold00028.31)
- - - - - - 2.33 - 3.1 1.88 - - - 2.23 - - - - - - - -
AMTR_s00032p00217210 (evm_27.TU.AmTr_v1.0_scaffold00032.214)
- - - - - - 3.33 - - - - - - - 1.97 - - - - 3.0 - -
AMTR_s00034p00029380 (evm_27.TU.AmTr_v1.0_scaffold00034.3)
- - - - 3.07 - - - 2.08 - - - - - 3.23 - - - - - - -
AMTR_s00036p00108740 (evm_27.TU.AmTr_v1.0_scaffold00036.43)
- - - - - - - - 3.7 3.17 - - - - - - - - - - - -
AMTR_s00039p00051030 (evm_27.TU.AmTr_v1.0_scaffold00039.19)
- - - - 3.56 - - - 3.35 - - - - - - - - - - - - -
AMTR_s00041p00205370 (evm_27.TU.AmTr_v1.0_scaffold00041.189)
- - - - - - - - 3.41 3.5 - - - - - - - - - - - -
AMTR_s00041p00209190 (evm_27.TU.AmTr_v1.0_scaffold00041.208)
- - - - - - 0.35 - 3.96 2.36 - - - - -14.42 - - - - - - -
AMTR_s00041p00210420 (evm_27.TU.AmTr_v1.0_scaffold00041.212)
- - - - - - - - 4.01 - - - - - 2.55 - - - - - - -
AMTR_s00041p00216450 (evm_27.TU.AmTr_v1.0_scaffold00041.231)
- - - 0.17 -0.25 - -1.39 - 2.84 3.0 - - -1.27 - - - - - - - - 2.04
AMTR_s00041p00217310 (evm_27.TU.AmTr_v1.0_scaffold00041.241)
- - - - 3.85 - - - 2.16 1.65 - - - - - - - - - - - -
AMTR_s00042p00220270 (evm_27.TU.AmTr_v1.0_scaffold00042.69)
- - - - - - - - 4.03 2.5 - - - - - - - - - - - -
AMTR_s00050p00041270 (evm_27.TU.AmTr_v1.0_scaffold00050.10)
- - - - - - - - 3.7 - - - - - 3.16 - - - - - - -
AMTR_s00051p00169130 (evm_27.TU.AmTr_v1.0_scaffold00051.64)
- - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00054p00182500 (evm_27.TU.AmTr_v1.0_scaffold00054.68)
- - - - 1.86 - 0.41 - 2.34 2.65 - - -0.5 0.69 0.35 - -1.17 0.62 - - - -3.08
AMTR_s00055p00124440 (evm_27.TU.AmTr_v1.0_scaffold00055.52)
- - - - 0.56 - 0.47 - 3.83 2.29 - - - - - - - - - - - -
AMTR_s00057p00166390 (evm_27.TU.AmTr_v1.0_scaffold00057.169)
- - - - 2.31 - 2.18 - 3.19 1.75 - - - - - - - - - - - -
AMTR_s00061p00139570 (evm_27.TU.AmTr_v1.0_scaffold00061.119)
- - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00062p00174230 (evm_27.TU.AmTr_v1.0_scaffold00062.168)
- - - - -1.59 - 1.99 - 1.99 0.53 0.07 - -0.02 0.19 0.78 - - 1.75 - -0.52 1.59 -1.71
AMTR_s00065p00168320 (evm_27.TU.AmTr_v1.0_scaffold00065.133)
- - - - 1.06 - 0.84 - 1.91 2.04 - 0.21 0.79 -0.18 1.21 - 0.12 0.02 -1.14 -1.23 - 0.22
AMTR_s00067p00138260 (evm_27.TU.AmTr_v1.0_scaffold00067.124)
- - - - 3.62 - - - 2.94 -0.34 - - 0.32 - - - - - - - - -
AMTR_s00068p00113810 (evm_27.TU.AmTr_v1.0_scaffold00068.67)
- - - - - - 1.41 - 4.08 1.26 - - - - - - - - - - - -
AMTR_s00076p00152920 (evm_27.TU.AmTr_v1.0_scaffold00076.50)
- - - - 3.57 - - - 3.34 - - - - - - - - - - - - -
AMTR_s00078p00118230 (evm_27.TU.AmTr_v1.0_scaffold00078.92)
- - - - 1.56 - 3.11 - 2.56 0.91 - - - -0.08 - - - - - - - 0.73
AMTR_s00081p00135650 (evm_27.TU.AmTr_v1.0_scaffold00081.51)
- - - - 3.81 - - - 3.0 - - - - - - - - - - - - -
AMTR_s00083p00019540 (evm_27.TU.AmTr_v1.0_scaffold00083.4)
- - - - - - 3.56 - 3.35 - - - - - - - - - - - - -
AMTR_s00083p00105420 (evm_27.TU.AmTr_v1.0_scaffold00083.29)
- - - - - - 2.26 - 3.45 1.33 - - 1.03 0.8 - - - - - - - -
AMTR_s00084p00179860 (evm_27.TU.AmTr_v1.0_scaffold00084.50)
- - - - 1.32 - 2.51 - 2.66 2.57 - - - 0.64 - - - - - - - -
AMTR_s00086p00105150 (evm_27.TU.AmTr_v1.0_scaffold00086.54)
- - - - - - 3.08 - 3.44 - - - 1.42 - - - - - - - - -
AMTR_s00088p00135400 (evm_27.TU.AmTr_v1.0_scaffold00088.102)
- - - - - - - - 4.19 1.6 - - -0.47 - - - - - - - - -
- - - - - - 3.97 - - 2.66 - - - - - - - - - - - -
AMTR_s00117p00111640 (evm_27.TU.AmTr_v1.0_scaffold00117.46)
- - - - - - - - 3.74 3.12 - - - - - - - - - - - -
AMTR_s00118p00065230 (evm_27.TU.AmTr_v1.0_scaffold00118.10)
- - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00122p00116060 (evm_27.TU.AmTr_v1.0_scaffold00122.52)
- - - 1.75 0.42 - 2.98 - 2.38 1.73 - - - -0.17 - - - - - - - -
AMTR_s00138p00066010 (evm_27.TU.AmTr_v1.0_scaffold00138.36)
- - - - - - 1.9 - 3.73 0.67 - - - 1.76 - - - - - - - -
AMTR_s00149p00098020 (evm_27.TU.AmTr_v1.0_scaffold00149.81)
- - - - - - 2.91 - 3.06 2.63 - - - - - - - - - - - -
AMTR_s00169p00047080 (evm_27.TU.AmTr_v1.0_scaffold00169.28)
- - - - 3.54 - - - 1.97 1.94 - - - - 1.4 - - - - - - -
AMTR_s00178p00026980 (evm_27.TU.AmTr_v1.0_scaffold00178.2)
- - - - - - 4.46 - - - - - - - - - - - - - - -
AMTR_s00213p00012540 (evm_27.TU.AmTr_v1.0_scaffold00213.1)
- - - - 3.95 - - - 2.71 - - - - - - - - - - - - -
AMTR_s00238p00014570 (evm_27.TU.AmTr_v1.0_scaffold00238.2)
- - - - 1.62 - -2.63 - 2.5 2.69 -1.21 - -1.83 -1.91 - - -1.45 - -0.63 -3.26 2.19 -
AMTR_s00240p00014450 (evm_27.TU.AmTr_v1.0_scaffold00240.1)
- - - - 2.95 - - - 2.56 - - - - - 3.06 - - - - - - -
AMTR_s00374p00013480 (evm_27.TU.AmTr_v1.0_scaffold00374.4)
- - - - - - 1.34 - 3.58 2.9 - - - - - - - - - - - -
AMTR_s01152p00009680 (evm_27.TU.AmTr_v1.0_scaffold01152.1)
- - - - - - - - 3.22 3.3 - - - 1.52 - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.