Heatmap: Cluster_111 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00257930 (evm_27.TU.AmTr_v1.0_scaffold00002.419)
1.46 3.83 - - -5.85 - -8.24 - -8.32 -8.64 -5.1 -5.32 -4.96 -9.76 -5.77 -5.88 - -0.3 -0.22 0.1 0.73 -1.14
AMTR_s00017p00203180 (evm_27.TU.AmTr_v1.0_scaffold00017.121)
-4.88 4.2 - - -3.12 - - - -5.52 -4.27 -0.91 -1.86 -4.11 - -4.57 - -0.36 -2.05 -3.03 - - 0.44
AMTR_s00019p00219950 (evm_27.TU.AmTr_v1.0_scaffold00019.275)
- 3.37 - -4.16 -0.82 -1.48 -4.94 - -3.47 -3.88 0.4 0.5 0.0 -0.79 -1.58 0.0 0.44 -0.19 -0.45 -0.99 -1.3 -0.05
AMTR_s00019p00224890 (evm_27.TU.AmTr_v1.0_scaffold00019.291)
- 4.15 - -2.87 -1.26 - -5.23 - -4.36 - - - -0.93 -2.48 -3.93 - 0.87 -0.56 - -4.56 - -1.65
AMTR_s00021p00252540 (evm_27.TU.AmTr_v1.0_scaffold00021.293)
- 4.17 - - - - - - 2.0 - - - - - - - - - - - - -
AMTR_s00024p00212400 (evm_27.TU.AmTr_v1.0_scaffold00024.194)
- 4.25 - -3.53 -0.13 - - - - - - - 0.98 - - - - - - - - -
AMTR_s00025p00169210 (evm_27.TU.AmTr_v1.0_scaffold00025.200)
- 3.92 - - -1.99 - - -3.18 - - 0.83 - 2.08 - -3.46 - - - - -3.87 - -1.72
AMTR_s00030p00121840 (evm_27.TU.AmTr_v1.0_scaffold00030.70)
- 3.27 - -0.97 -0.92 - -2.5 - -0.14 -0.28 -0.08 - 1.03 0.03 -1.41 -0.57 -0.84 - -1.36 1.06 -3.17 0.26
AMTR_s00031p00195840 (evm_27.TU.AmTr_v1.0_scaffold00031.94)
- 4.44 -3.77 - -2.1 - -5.43 - -7.01 -6.26 - - - - - - - - - - - -
AMTR_s00035p00164780 (evm_27.TU.AmTr_v1.0_scaffold00035.30)
0.78 4.18 0.59 - -0.75 - - - -8.32 -8.23 -5.35 - -7.13 -6.5 -8.83 - - - - -6.87 - -
AMTR_s00038p00175990 (evm_27.TU.AmTr_v1.0_scaffold00038.118)
- 4.3 - - -1.89 -0.45 - - -5.5 - - - -2.26 -5.25 -5.33 - - - - -2.7 -0.33 -3.99
AMTR_s00038p00230020 (evm_27.TU.AmTr_v1.0_scaffold00038.224)
- 4.42 - - -3.78 - - - - - - - -4.47 - -2.21 - - - - -2.24 - -
AMTR_s00044p00125900 (evm_27.TU.AmTr_v1.0_scaffold00044.109)
- 3.54 - - -4.62 - 1.39 -0.43 1.32 0.66 - -1.16 -3.63 -0.41 - - 0.18 - -1.51 - - -3.24
AMTR_s00047p00094850 (evm_27.TU.AmTr_v1.0_scaffold00047.37)
- 3.62 - - 1.11 - 1.21 -0.68 0.31 1.32 - - - -0.93 -1.6 - - - - - - -
AMTR_s00047p00179600 (evm_27.TU.AmTr_v1.0_scaffold00047.102)
- 4.44 - - -1.95 - - - - - - - - - - - - - - - - -
AMTR_s00049p00076080 (evm_27.TU.AmTr_v1.0_scaffold00049.48)
- 3.79 - - 0.21 - - - - - - 1.73 -2.7 -4.77 -1.91 1.48 -2.41 - - -3.68 - -2.4
AMTR_s00049p00211790 (evm_27.TU.AmTr_v1.0_scaffold00049.239)
- 3.98 - -2.61 1.13 - - - -2.93 - -1.25 - -2.99 -2.68 -2.3 -0.07 - - -0.68 - 0.14 -2.53
AMTR_s00050p00182320 (evm_27.TU.AmTr_v1.0_scaffold00050.42)
- 3.32 - - -0.18 - -2.55 - -3.56 -2.98 -0.35 -0.91 -1.11 -2.46 -0.97 -0.89 0.7 -0.52 0.17 -0.96 1.74 -1.07
AMTR_s00053p00154830 (evm_27.TU.AmTr_v1.0_scaffold00053.102)
- 4.15 - - 0.93 0.36 - - -5.83 - -2.47 - -2.44 -3.98 -1.65 - - - - -3.62 - -1.9
AMTR_s00059p00075680 (evm_27.TU.AmTr_v1.0_scaffold00059.50)
- 4.0 - - -1.26 - -2.32 - -2.25 -1.97 1.4 - 1.07 -4.89 -4.1 - -3.27 - - - - -5.7
AMTR_s00059p00136970 (evm_27.TU.AmTr_v1.0_scaffold00059.118)
- 3.5 - - 0.05 - -3.29 - - -4.79 -0.75 2.03 -0.32 -1.02 -1.02 0.46 -0.11 - - -0.68 - -3.19
AMTR_s00060p00171810 (evm_27.TU.AmTr_v1.0_scaffold00060.108)
- 3.7 - - -0.22 - -2.28 - -4.35 -6.3 -1.74 0.04 -2.39 -3.55 -1.99 - 0.09 -1.15 0.37 -1.52 1.39 -1.86
AMTR_s00060p00171860 (evm_27.TU.AmTr_v1.0_scaffold00060.109)
- 3.96 - - -0.34 - -2.04 - -4.78 -3.6 -0.98 -1.17 -2.0 -3.26 -1.24 -0.74 -0.25 -1.37 -0.82 -1.15 -1.52 -1.39
AMTR_s00060p00217030 (evm_27.TU.AmTr_v1.0_scaffold00060.171)
- 4.01 - - 0.72 - -2.37 - -3.24 -3.73 - - -1.04 -3.32 -0.78 - - - - -1.21 1.06 -2.55
AMTR_s00061p00070770 (evm_27.TU.AmTr_v1.0_scaffold00061.46)
-2.6 3.8 -1.14 -1.56 -0.23 - - - -5.53 -5.67 0.3 0.28 -0.67 -0.5 0.01 -4.6 -1.06 -4.23 - -0.9 -1.8 -4.66
AMTR_s00063p00152970 (evm_27.TU.AmTr_v1.0_scaffold00063.44)
- 4.38 - - -1.67 - - - -3.46 - - - - - -0.25 - - - - - - -
AMTR_s00065p00161710 (evm_27.TU.AmTr_v1.0_scaffold00065.120)
- 4.14 0.07 -1.37 -0.43 -2.73 -3.58 - -2.54 -2.91 -3.28 - -1.88 -3.11 -2.12 - -3.39 - - -1.07 -1.76 -3.44
AMTR_s00074p00160100 (evm_27.TU.AmTr_v1.0_scaffold00074.74)
-2.02 3.49 -5.43 - -0.05 - -1.61 - -0.58 -1.2 0.62 1.08 -0.8 -1.17 -1.4 -2.97 0.68 - -2.79 -3.2 -2.86 -0.14
AMTR_s00074p00199470 (evm_27.TU.AmTr_v1.0_scaffold00074.127)
- 3.64 - - -3.55 - -4.08 -3.76 -3.28 -5.53 0.41 -0.08 -0.3 -1.96 -3.56 0.68 -0.16 -1.0 -0.03 -0.55 - 0.18
AMTR_s00077p00088270 (evm_27.TU.AmTr_v1.0_scaffold00077.72)
- 4.14 - - -1.42 - -5.69 - - -5.37 -1.52 - -0.65 -1.76 -2.42 -1.3 - - - -4.89 - 1.06
AMTR_s00079p00083420 (evm_27.TU.AmTr_v1.0_scaffold00079.27)
- 4.33 - - -2.19 - - - -4.91 -4.21 -0.93 - -3.78 -0.07 -5.82 - - - - - - -
AMTR_s00079p00083460 (evm_27.TU.AmTr_v1.0_scaffold00079.28)
- 4.2 1.05 - -1.32 -3.14 - - -7.0 -4.4 -2.41 -1.65 -4.76 -1.39 -4.21 - - - - - - -
AMTR_s00087p00060880 (evm_27.TU.AmTr_v1.0_scaffold00087.13)
- 4.46 - - - - - - - - - - - - - - - - - - - -
AMTR_s00087p00060950 (evm_27.TU.AmTr_v1.0_scaffold00087.14)
-3.17 4.45 - - -5.24 - - - - - - - - - - - - - - - - -
AMTR_s00087p00061020 (evm_27.TU.AmTr_v1.0_scaffold00087.15)
- 4.46 - - - - - - - - - - - - - - - - - - - -
AMTR_s00088p00145250 (evm_27.TU.AmTr_v1.0_scaffold00088.110)
- 4.08 - - -3.51 - - - - - - - -1.15 -2.56 - -0.86 - - -0.65 - -0.64 1.33
AMTR_s00099p00110810 (evm_27.TU.AmTr_v1.0_scaffold00099.93)
- 3.74 0.7 - -1.16 - - - - -5.63 1.5 -0.69 -1.18 -5.23 -0.19 0.75 - - - - - -4.42
AMTR_s00102p00102440 (evm_27.TU.AmTr_v1.0_scaffold00102.53)
- 4.41 - - -1.65 - -3.65 - -4.26 - - - - - -2.57 - - - - - - -3.44
AMTR_s00113p00116210 (evm_27.TU.AmTr_v1.0_scaffold00113.24)
- 4.22 - - -1.01 - -4.74 - 0.72 0.14 - - - - -5.02 - - - - - - -3.84
AMTR_s00122p00121750 (evm_27.TU.AmTr_v1.0_scaffold00122.60)
- 4.46 - - - - - - - - - - - - - - - - - - - -
AMTR_s00130p00034380 (evm_27.TU.AmTr_v1.0_scaffold00130.10)
- 3.91 - - 0.61 - - - -0.31 -3.75 0.45 - -0.51 -3.53 -4.24 - - 1.02 - -1.71 - -
AMTR_s00148p00049800 (evm_27.TU.AmTr_v1.0_scaffold00148.26)
- 4.42 -3.66 - -3.95 - - - -3.21 -2.65 -2.55 - - - - - - - - -4.84 - -
AMTR_s00152p00093450 (evm_27.TU.AmTr_v1.0_scaffold00152.35)
-4.59 4.08 - - -6.71 -3.51 - - - - -5.3 - -3.8 -5.81 -5.13 - 0.59 0.06 -0.16 -0.36 -0.91 -7.29
AMTR_s00157p00030180 (evm_27.TU.AmTr_v1.0_scaffold00157.6)
- 4.34 - - - - - - - - - - 0.28 -3.28 - - - - - - - -1.34
AMTR_s00203p00031730 (evm_27.TU.AmTr_v1.0_scaffold00203.10)
- 4.14 - - -1.2 - - - - - - - -3.29 - - - - - - - - 1.95
AMTR_s00224p00009210 (evm_27.TU.AmTr_v1.0_scaffold00224.2)
- 4.31 - -1.38 -2.64 - -2.0 - -1.61 -2.0 - - - - - - - - - - -0.46 -
AMTR_s00243p00012700 (evm_27.TU.AmTr_v1.0_scaffold00243.2)
- 4.46 - - - - - - - - - - - - - - - - - - - -
AMTR_s00486p00010130 (evm_27.TU.AmTr_v1.0_scaffold00486.1)
- 4.3 - -0.81 -1.03 0.1 - - - - - - - -4.9 -2.7 - - - - - - -
AMTR_s02676p00000730 (evm_27.TU.AmTr_v1.0_scaffold02676.1)
- 3.71 - -2.01 -3.85 - - - -5.71 - -1.59 -0.16 0.09 -1.06 -0.55 - - - - -1.03 1.99 -0.49
AMTR_s02681p00002840 (evm_27.TU.AmTr_v1.0_scaffold02681.1)
- 3.55 - -2.16 -1.02 - -2.09 - -1.51 - 0.85 0.68 -1.1 -1.35 -1.99 - -1.59 -0.8 -0.78 -1.35 1.33 -3.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.