Heatmap: Cluster_220 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00218040 (evm_27.TU.AmTr_v1.0_scaffold00002.231)
15.94 8.99 12.09 14.04 9.98 11.97 7.81 3.93 7.24 8.79 5.17 10.81 10.52 9.34 18.68 1.57 2.68 5.07 3.7 8.88 0.91 10.68
AMTR_s00002p00268550 (evm_27.TU.AmTr_v1.0_scaffold00002.538)
127.65 91.17 57.4 22.31 244.72 144.56 140.31 62.94 136.45 127.15 61.17 93.66 111.84 117.46 227.65 80.61 132.42 65.39 45.34 103.65 50.71 77.48
AMTR_s00003p00241460 (evm_27.TU.AmTr_v1.0_scaffold00003.258)
0.0 0.0 15.34 0.02 8.15 10.52 6.45 0.0 3.52 4.18 4.15 2.14 2.37 2.31 8.01 1.09 0.2 2.35 2.85 3.27 0.42 2.45
AMTR_s00003p00261780 (evm_27.TU.AmTr_v1.0_scaffold00003.348)
33.74 49.96 53.74 22.92 57.74 26.74 27.79 9.27 27.37 27.36 32.09 32.8 29.47 37.62 39.69 43.82 24.66 46.84 38.3 38.64 26.02 21.03
AMTR_s00004p00018810 (evm_27.TU.AmTr_v1.0_scaffold00004.5)
6.25 19.22 29.38 14.61 11.83 34.3 16.96 6.95 15.33 19.64 14.31 18.56 26.67 15.76 22.7 11.96 17.27 14.53 12.98 22.66 5.83 22.38
AMTR_s00004p00151230 (evm_27.TU.AmTr_v1.0_scaffold00004.158)
53.33 46.71 67.74 25.33 54.28 41.13 22.5 16.96 23.76 22.74 41.97 40.11 43.71 44.42 29.5 15.16 24.55 26.08 27.68 27.66 15.06 39.09
AMTR_s00007p00095830 (evm_27.TU.AmTr_v1.0_scaffold00007.54)
54.71 39.68 76.25 19.95 52.12 75.77 49.77 23.01 62.3 63.19 16.45 31.89 53.32 61.03 73.62 13.27 15.61 10.74 13.39 59.36 3.85 72.98
AMTR_s00009p00222480 (evm_27.TU.AmTr_v1.0_scaffold00009.166)
40.18 29.02 53.89 4.99 27.42 48.49 11.17 12.33 11.54 12.36 31.63 47.66 38.64 35.31 37.35 22.58 22.51 22.59 24.0 43.15 7.39 32.71
AMTR_s00013p00144020 (evm_27.TU.AmTr_v1.0_scaffold00013.71)
42.65 73.48 21.43 17.95 31.4 72.83 52.78 10.74 38.12 43.09 55.44 50.86 34.82 39.8 45.78 89.29 24.12 22.83 37.09 41.84 36.12 31.53
AMTR_s00016p00150480 (evm_27.TU.AmTr_v1.0_scaffold00016.107)
306.54 93.67 116.92 54.29 354.94 139.14 231.48 81.1 159.94 184.63 89.1 130.86 128.0 170.45 278.53 105.49 143.07 62.25 55.1 78.76 41.85 114.46
AMTR_s00016p00237360 (evm_27.TU.AmTr_v1.0_scaffold00016.242)
23.95 40.31 0.03 1.44 23.31 41.13 63.61 0.47 30.14 30.15 35.62 30.3 18.85 23.58 21.06 22.29 34.99 24.39 15.24 12.45 20.84 13.92
AMTR_s00021p00189630 (evm_27.TU.AmTr_v1.0_scaffold00021.150)
146.58 72.88 55.61 18.27 125.88 39.12 116.95 6.87 87.31 69.85 37.3 66.37 58.2 59.51 102.82 16.24 67.1 21.26 26.02 34.2 11.02 68.73
AMTR_s00021p00218440 (evm_27.TU.AmTr_v1.0_scaffold00021.201)
324.82 219.76 334.95 147.69 183.95 243.77 149.34 108.28 85.39 114.5 158.22 147.46 171.99 143.73 195.76 119.6 105.95 92.98 143.65 205.88 64.82 150.05
AMTR_s00022p00110010 (evm_27.TU.AmTr_v1.0_scaffold00022.97)
17.2 6.14 14.18 8.38 49.13 79.29 42.18 18.98 37.63 40.71 37.12 26.99 45.91 59.06 131.37 20.53 19.76 24.37 29.17 35.75 16.57 37.16
AMTR_s00022p00232100 (evm_27.TU.AmTr_v1.0_scaffold00022.314)
0.02 0.0 10.78 1.01 9.32 6.5 2.89 5.52 3.97 4.25 4.16 2.22 7.3 17.86 18.15 0.89 1.57 3.53 4.92 9.09 2.93 2.25
AMTR_s00023p00243610 (evm_27.TU.AmTr_v1.0_scaffold00023.214)
62.99 14.55 17.07 15.68 90.27 76.41 84.7 35.7 41.5 36.56 38.07 33.97 37.73 33.12 43.56 29.36 16.65 16.07 22.67 18.6 12.81 14.45
AMTR_s00025p00235380 (evm_27.TU.AmTr_v1.0_scaffold00025.346)
53.42 41.96 57.09 0.14 75.72 35.72 51.65 10.03 45.38 54.37 27.07 28.99 35.63 44.08 38.69 42.56 40.2 24.02 24.01 49.19 23.87 23.8
AMTR_s00037p00182150 (evm_27.TU.AmTr_v1.0_scaffold00037.88)
0.0 0.0 0.0 0.23 2.16 2.53 1.68 0.0 2.46 2.55 0.0 0.99 0.5 0.58 1.47 0.0 0.22 0.87 0.0 0.85 0.0 0.37
AMTR_s00038p00171980 (evm_27.TU.AmTr_v1.0_scaffold00038.111)
56.37 147.27 107.53 50.01 90.33 35.23 43.2 29.3 37.76 38.5 73.37 61.78 90.94 72.3 71.87 58.0 77.61 31.18 37.96 38.37 23.41 76.59
0.0 0.76 0.0 0.0 0.39 0.0 0.3 0.02 0.12 0.18 0.0 0.0 0.01 0.01 0.05 0.0 0.0 0.0 0.0 0.02 0.0 0.0
AMTR_s00048p00164960 (evm_27.TU.AmTr_v1.0_scaffold00048.118)
8.88 9.3 12.94 1.01 14.0 9.77 10.68 9.84 20.18 10.47 11.14 8.13 8.49 11.38 12.97 4.88 9.98 6.03 5.08 4.29 3.78 3.59
AMTR_s00049p00111320 (evm_27.TU.AmTr_v1.0_scaffold00049.87)
17.93 0.0 0.0 0.11 36.91 41.16 29.47 3.62 40.3 48.12 18.91 25.96 13.61 21.93 20.48 17.55 23.99 20.0 17.21 16.7 15.5 15.03
AMTR_s00056p00139340 (evm_27.TU.AmTr_v1.0_scaffold00056.110)
0.06 24.87 7.53 4.01 10.57 43.53 43.67 20.89 30.84 32.06 24.72 37.16 13.05 19.91 11.05 13.29 22.5 15.23 10.37 8.73 7.54 8.74
AMTR_s00057p00035800 (evm_27.TU.AmTr_v1.0_scaffold00057.16)
96.14 56.34 72.2 31.4 89.54 78.26 76.83 27.25 53.35 53.74 51.21 53.23 65.43 65.33 74.13 39.59 42.05 43.1 31.94 40.21 21.95 56.05
AMTR_s00060p00057310 (evm_27.TU.AmTr_v1.0_scaffold00060.17)
46.5 70.94 48.19 61.69 47.61 44.64 14.33 12.57 33.76 30.23 10.39 26.69 22.56 17.7 17.51 12.03 19.6 6.92 9.47 17.42 17.08 23.89
AMTR_s00060p00208570 (evm_27.TU.AmTr_v1.0_scaffold00060.151)
108.58 70.59 110.11 27.23 66.21 90.42 26.86 13.89 25.36 26.41 70.91 68.39 63.81 59.33 67.6 80.06 55.13 61.38 59.4 49.29 27.99 60.36
AMTR_s00061p00134950 (evm_27.TU.AmTr_v1.0_scaffold00061.112)
4.27 7.31 7.79 0.53 47.32 49.22 51.52 7.24 25.54 28.97 26.6 17.4 24.51 28.37 35.25 18.82 15.31 18.21 23.81 15.12 7.58 7.86
AMTR_s00061p00163190 (evm_27.TU.AmTr_v1.0_scaffold00061.157)
41.98 20.56 16.5 2.36 22.77 36.34 19.5 5.73 17.47 20.69 17.58 13.5 19.78 16.86 16.25 40.49 25.94 19.47 15.62 30.66 24.34 8.05
AMTR_s00062p00026590 (evm_27.TU.AmTr_v1.0_scaffold00062.11)
44.34 39.85 95.68 43.25 46.3 27.25 37.86 16.7 23.3 28.29 22.95 34.21 22.34 19.49 11.32 39.71 17.09 15.64 17.5 5.45 8.02 10.21
AMTR_s00062p00158840 (evm_27.TU.AmTr_v1.0_scaffold00062.148)
22.6 58.39 22.63 48.69 48.28 16.47 48.35 1.72 27.57 28.51 39.15 37.93 41.65 28.92 19.24 24.09 30.16 34.72 39.11 20.47 9.48 42.03
AMTR_s00065p00182000 (evm_27.TU.AmTr_v1.0_scaffold00065.155)
300.13 203.5 224.41 52.1 97.67 192.01 85.29 58.64 64.22 78.83 64.71 48.36 81.59 107.07 196.92 55.39 35.6 30.76 40.35 60.63 28.69 64.53
AMTR_s00066p00105400 (evm_27.TU.AmTr_v1.0_scaffold00066.90)
43.5 57.15 80.9 18.9 74.56 12.74 40.8 9.96 25.5 28.13 29.03 37.21 27.74 28.16 23.98 42.7 16.21 35.56 33.78 17.83 10.73 15.97
AMTR_s00069p00123730 (evm_27.TU.AmTr_v1.0_scaffold00069.82)
24.58 20.79 17.62 15.55 30.45 25.93 13.83 9.09 36.73 28.82 19.37 19.37 37.08 37.37 76.45 18.29 19.37 14.58 12.68 35.21 10.58 32.79
AMTR_s00074p00114650 (evm_27.TU.AmTr_v1.0_scaffold00074.34)
17.06 0.0 21.45 37.99 70.48 60.29 63.25 14.33 54.64 57.48 42.36 41.38 39.14 48.15 38.62 34.2 31.71 17.61 27.04 33.29 10.38 40.63
AMTR_s00080p00161640 (evm_27.TU.AmTr_v1.0_scaffold00080.81)
31.13 34.99 29.08 8.15 39.84 36.65 36.88 4.84 23.17 29.4 24.79 26.36 21.35 21.07 31.4 19.29 20.76 15.69 15.0 17.74 12.67 15.75
AMTR_s00089p00097770 (evm_27.TU.AmTr_v1.0_scaffold00089.53)
17.21 27.45 9.19 2.06 34.98 0.16 18.35 4.44 12.65 15.43 9.23 10.09 3.54 9.24 13.86 0.4 7.63 3.07 7.42 5.98 5.4 0.73
AMTR_s00100p00159440 (evm_27.TU.AmTr_v1.0_scaffold00100.65)
20.82 0.0 22.35 0.0 11.92 15.29 8.11 0.0 7.34 7.04 7.46 18.4 7.89 13.95 7.68 2.37 4.72 9.21 19.6 10.31 19.28 11.88
AMTR_s00103p00025680 (evm_27.TU.AmTr_v1.0_scaffold00103.7)
31.18 16.27 78.51 11.14 15.09 29.0 30.21 1.45 29.4 26.89 23.55 36.41 26.35 33.24 17.04 6.79 33.48 24.6 33.95 40.59 17.79 10.12
AMTR_s00106p00052530 (evm_27.TU.AmTr_v1.0_scaffold00106.30)
107.1 58.11 52.67 7.25 82.21 69.38 66.5 27.8 41.49 45.72 41.52 71.22 68.02 53.62 50.96 110.52 29.73 49.88 79.51 56.49 31.33 59.39
AMTR_s00106p00124640 (evm_27.TU.AmTr_v1.0_scaffold00106.96)
13.27 13.06 23.54 0.79 7.53 41.69 64.72 19.68 31.58 33.51 30.03 24.24 22.07 24.25 17.72 16.86 31.31 18.13 16.46 16.81 13.18 17.75
AMTR_s00108p00141550 (evm_27.TU.AmTr_v1.0_scaffold00108.42)
0.0 0.0 0.0 0.07 15.81 19.96 18.25 8.93 8.82 12.21 8.94 0.0 7.27 4.28 4.63 0.94 5.79 3.65 3.48 3.6 0.0 3.28
AMTR_s00111p00064560 (evm_27.TU.AmTr_v1.0_scaffold00111.32)
56.71 76.33 12.06 1.29 54.07 36.53 83.96 24.43 58.94 59.07 34.56 46.34 28.25 39.75 22.43 17.58 22.7 41.76 33.41 20.13 19.51 20.79
AMTR_s00116p00090490 (evm_27.TU.AmTr_v1.0_scaffold00116.16)
56.8 25.68 30.64 52.16 35.39 26.48 37.18 9.35 22.35 28.17 23.01 23.9 26.31 26.7 28.76 30.8 17.64 21.71 22.71 24.5 13.99 21.97
AMTR_s00116p00111830 (evm_27.TU.AmTr_v1.0_scaffold00116.26)
1.35 1.63 3.64 2.79 5.84 0.15 1.43 0.0 2.19 2.12 2.98 4.43 2.8 3.29 3.81 4.5 2.0 5.82 5.58 4.15 4.57 3.4
AMTR_s00126p00070000 (evm_27.TU.AmTr_v1.0_scaffold00126.29)
15.71 15.95 5.95 1.19 23.55 44.98 54.19 8.25 21.4 20.79 14.95 14.36 16.99 17.58 9.34 13.46 39.4 19.67 19.07 13.41 11.73 10.34
AMTR_s00128p00107690 (evm_27.TU.AmTr_v1.0_scaffold00128.37)
12.23 0.0 0.89 0.0 5.62 0.0 7.71 0.0 1.17 0.98 0.0 1.07 0.08 1.53 1.09 0.0 0.0 0.0 0.42 2.09 0.0 0.19
AMTR_s00140p00036490 (evm_27.TU.AmTr_v1.0_scaffold00140.9)
0.0 0.0 0.0 0.0 2.67 13.1 3.87 0.0 9.27 11.29 3.64 13.62 2.78 4.02 1.09 0.0 5.22 2.21 0.9 0.07 0.0 6.17
AMTR_s00154p00057990 (evm_27.TU.AmTr_v1.0_scaffold00154.36)
14.88 28.1 23.4 1.07 45.21 80.2 25.8 0.11 22.89 28.48 16.65 18.9 51.81 31.31 79.33 41.29 12.29 22.91 37.27 41.46 13.7 32.66
AMTR_s00155p00071520 (evm_27.TU.AmTr_v1.0_scaffold00155.46)
67.17 21.6 61.71 1.77 54.66 34.67 45.52 11.54 27.23 34.12 14.81 14.3 66.17 42.68 27.2 34.39 46.86 27.48 27.26 85.03 27.16 43.98
AMTR_s00156p00055010 (evm_27.TU.AmTr_v1.0_scaffold00156.27)
13.92 15.93 13.69 1.1 16.12 0.0 12.45 0.43 6.66 10.23 3.39 5.91 3.35 3.45 3.65 1.36 1.56 2.28 3.86 1.28 0.65 0.01
AMTR_s00156p00089110 (evm_27.TU.AmTr_v1.0_scaffold00156.44)
60.1 57.99 58.36 21.37 66.28 46.68 51.38 16.47 46.55 43.38 28.4 27.12 28.76 36.65 41.18 19.32 32.5 21.07 14.61 6.91 7.69 30.61
AMTR_s00165p00060220 (evm_27.TU.AmTr_v1.0_scaffold00165.39)
35.35 44.61 59.76 1.61 107.42 101.71 50.65 34.64 95.24 66.07 25.45 22.96 63.56 67.58 94.62 21.81 21.48 15.56 22.38 42.74 16.97 38.37
AMTR_s00167p00018590 (evm_27.TU.AmTr_v1.0_scaffold00167.3)
305.87 274.23 216.33 193.42 291.32 221.47 94.83 137.93 62.75 81.62 67.84 51.72 138.67 105.28 172.23 73.45 74.17 54.84 59.88 155.25 30.25 169.5
AMTR_s00168p00036950 (evm_27.TU.AmTr_v1.0_scaffold00168.10)
73.23 115.36 80.68 24.2 136.62 0.0 116.7 21.02 120.06 116.94 32.77 82.55 64.55 72.28 84.65 13.95 69.4 21.68 22.97 23.32 12.97 56.77
AMTR_s00197p00035890 (evm_27.TU.AmTr_v1.0_scaffold00197.14)
51.62 35.84 67.61 41.0 77.74 90.43 37.37 0.3 22.0 24.95 23.6 25.69 31.53 15.49 24.17 9.1 38.29 4.28 1.57 15.22 2.88 47.35
AMTR_s05591p00003960 (evm_27.TU.AmTr_v1.0_scaffold05591.1)
0.0 1.59 0.0 0.0 1.16 0.0 1.33 0.37 0.59 0.81 0.0 0.0 0.0 0.13 0.08 0.0 0.0 0.0 0.14 0.0 0.0 0.03

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)