Heatmap: Cluster_72 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00234480 (evm_27.TU.AmTr_v1.0_scaffold00001.262)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00002p00123410 (evm_27.TU.AmTr_v1.0_scaffold00002.78)
- - - - -8.41 - -9.02 - - - - - - - - - - - - -8.42 - 4.46
AMTR_s00002p00124320 (evm_27.TU.AmTr_v1.0_scaffold00002.79)
- - - - - - -8.77 - - - - - - - - - - - - -7.59 - 4.46
AMTR_s00002p00125660 (evm_27.TU.AmTr_v1.0_scaffold00002.80)
- - - - -5.05 - -9.0 - -10.06 - - - - - - - - - - -8.29 - 4.46
AMTR_s00002p00125730 (evm_27.TU.AmTr_v1.0_scaffold00002.80)
- - - - -4.21 - - - - - - - -7.17 - - - - - - - - 4.46
AMTR_s00002p00126520 (evm_27.TU.AmTr_v1.0_scaffold00002.80)
- - - - -10.3 - -7.86 - -9.66 -10.86 - - - - - - - - - -7.23 - 4.46
AMTR_s00009p00242710 (evm_27.TU.AmTr_v1.0_scaffold00009.223)
- - - - -0.21 - - - - - - - -3.95 -3.88 0.99 - - - - - - 4.25
AMTR_s00009p00254350 (evm_27.TU.AmTr_v1.0_scaffold00009.271)
- - -2.05 - -4.52 - -7.2 - -7.05 - -3.64 - -1.9 -6.05 -5.5 - -3.99 - - - - 4.41
AMTR_s00010p00265970 (evm_27.TU.AmTr_v1.0_scaffold00010.517)
- - - - 0.19 - -5.63 - - - - - - - -2.05 - -1.96 - - 0.33 - 4.25
AMTR_s00019p00199580 (evm_27.TU.AmTr_v1.0_scaffold00019.231)
- - - - -2.83 - -1.17 - -3.75 -2.03 - - 0.99 - -2.59 - -1.41 - - - - 4.21
AMTR_s00019p00199860 (evm_27.TU.AmTr_v1.0_scaffold00019.232)
- - - - -4.73 - - - - - - - -1.81 -3.68 - - - - - - - 4.43
AMTR_s00019p00218710 (evm_27.TU.AmTr_v1.0_scaffold00019.272)
- - - - 0.06 - -2.81 - -3.47 -2.58 -2.66 - - -5.66 -2.04 - - - - - - 4.33
AMTR_s00019p00237230 (evm_27.TU.AmTr_v1.0_scaffold00019.335)
- - - - -1.26 - -0.49 0.07 0.63 0.2 -1.04 -4.18 -1.39 -0.75 -2.03 -2.42 -2.51 -4.37 -3.77 -7.58 - 3.89
AMTR_s00022p00201920 (evm_27.TU.AmTr_v1.0_scaffold00022.233)
- - - - -4.69 - - - -6.52 -5.55 - - - -3.49 -5.74 - -4.57 - - -5.73 - 4.44
AMTR_s00025p00226550 (evm_27.TU.AmTr_v1.0_scaffold00025.322)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00028p00116810 (evm_27.TU.AmTr_v1.0_scaffold00028.37)
- - - - 0.19 - - - - - - - - - - - - - - - - 4.38
AMTR_s00033p00229200 (evm_27.TU.AmTr_v1.0_scaffold00033.222)
- - - - - - -2.21 - 0.81 1.4 - - -0.94 -3.17 - - - - - -2.1 - 4.05
AMTR_s00034p00239800 (evm_27.TU.AmTr_v1.0_scaffold00034.124)
- - - - -0.59 - - - - -6.84 -2.37 -0.36 -4.7 -5.49 0.07 - - - - - - 4.27
AMTR_s00034p00240370 (evm_27.TU.AmTr_v1.0_scaffold00034.126)
- - - - - - - - - - -4.61 - -3.03 -7.23 - - - - - -6.14 - 4.45
AMTR_s00034p00240460 (evm_27.TU.AmTr_v1.0_scaffold00034.127)
- - - - -5.7 - -8.34 - - - -5.73 - -8.04 - - - - - - - - 4.46
AMTR_s00038p00220080 (evm_27.TU.AmTr_v1.0_scaffold00038.188)
- - - - 0.2 - - - - - - - - - - - - - - - - 4.38
AMTR_s00038p00226940 (evm_27.TU.AmTr_v1.0_scaffold00038.215)
- - - - -3.68 - - - - - -3.55 -1.68 -1.09 -2.58 - -0.5 - - -2.85 -4.64 - 4.32
AMTR_s00039p00176410 (evm_27.TU.AmTr_v1.0_scaffold00039.139)
- - - - -1.6 - -6.91 - -6.83 -6.84 -2.65 - -2.54 - -4.28 -3.02 -3.01 - - -6.28 0.2 4.31
AMTR_s00040p00082580 (evm_27.TU.AmTr_v1.0_scaffold00040.43)
- - - - -0.54 - - - - - - - -2.54 - - - - - - - - 4.4
AMTR_s00041p00175670 (evm_27.TU.AmTr_v1.0_scaffold00041.133)
- - - - -9.12 - -9.76 - -10.95 -10.44 -7.55 - -11.64 -12.35 -12.47 -8.04 - - - -8.89 - 4.46
AMTR_s00041p00177300 (evm_27.TU.AmTr_v1.0_scaffold00041.138)
- - - - -4.7 - - - - - -3.76 - -1.59 - - - - - -3.24 -6.4 - 4.42
AMTR_s00041p00178500 (evm_27.TU.AmTr_v1.0_scaffold00041.140)
- - - -3.46 - - -4.91 - -5.86 -5.48 - - -0.72 -7.78 - - - - - - - 4.41
AMTR_s00041p00181310 (evm_27.TU.AmTr_v1.0_scaffold00041.148)
- - - - - - - - -5.33 - -4.59 - - - - - - - - - - 4.46
AMTR_s00041p00182080 (evm_27.TU.AmTr_v1.0_scaffold00041.149)
- -3.9 - - -6.08 - -9.27 -10.48 - - -0.77 -2.54 -9.18 -0.74 -1.41 -5.19 -1.14 -3.22 -7.71 -7.76 - 4.29
AMTR_s00041p00182920 (evm_27.TU.AmTr_v1.0_scaffold00041.151)
- - - - -6.33 - -7.28 - -8.69 -7.94 -6.3 - -6.5 -6.75 -6.32 - -5.69 - - -6.48 - 4.45
AMTR_s00041p00183600 (evm_27.TU.AmTr_v1.0_scaffold00041.152)
- - - - - - - - - - - - - - -7.91 - - - - - - 4.46
AMTR_s00041p00187460 (evm_27.TU.AmTr_v1.0_scaffold00041.160)
- - - - -4.18 - - - - -6.4 - - 1.52 - - - - - - - - 4.25
AMTR_s00057p00127840 (evm_27.TU.AmTr_v1.0_scaffold00057.107)
- - - - -3.98 - - - -6.4 -6.74 - - -1.55 -5.86 - - - - - - - 4.43
AMTR_s00057p00128320 (evm_27.TU.AmTr_v1.0_scaffold00057.109)
- - - - -7.53 - - - -7.47 -8.68 - - -3.03 -6.98 - - - - - - - 4.45
AMTR_s00057p00159510 (evm_27.TU.AmTr_v1.0_scaffold00057.148)
- - - -6.89 -2.55 - -7.77 - -8.18 -6.21 -2.26 1.54 -1.36 -3.25 1.1 -2.61 - - -4.22 - - 3.98
AMTR_s00059p00097920 (evm_27.TU.AmTr_v1.0_scaffold00059.72)
- - - - -11.91 - -10.11 - -12.55 -11.07 -7.65 - -9.36 - - -5.73 -9.63 - - -9.05 - 4.46
AMTR_s00059p00174680 (evm_27.TU.AmTr_v1.0_scaffold00059.175)
0.47 - - - -1.56 - -4.79 -0.49 -1.62 -1.56 -2.44 -2.24 1.17 -3.1 -1.41 - -1.4 - -3.09 -3.05 -4.59 3.91
AMTR_s00068p00169090 (evm_27.TU.AmTr_v1.0_scaffold00068.122)
- - - - -0.02 - -6.19 - -5.94 -6.31 - - - - -5.8 -2.35 - - - - - 4.38
AMTR_s00077p00066810 (evm_27.TU.AmTr_v1.0_scaffold00077.45)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00088p00092690 (evm_27.TU.AmTr_v1.0_scaffold00088.55)
- - - - -3.49 - - - -3.76 - - - - - - - - - - - - 4.45
AMTR_s00088p00093440 (evm_27.TU.AmTr_v1.0_scaffold00088.56)
- - - - -2.42 - - - 0.99 0.66 - - - - - - - - -3.02 - - 4.18
AMTR_s00098p00173330 (evm_27.TU.AmTr_v1.0_scaffold00098.57)
- - - - -1.58 - - - - - -3.66 - -0.01 -6.79 -2.04 - -3.9 0.48 -0.28 -3.73 - 4.17
AMTR_s00099p00131560 (evm_27.TU.AmTr_v1.0_scaffold00099.117)
- - - - 1.48 - - - - - -1.48 - -1.77 -4.08 -3.63 - -1.59 - - - - 4.18
AMTR_s00107p00095610 (evm_27.TU.AmTr_v1.0_scaffold00107.27)
- - - - - - - - - - - - 1.49 - - - - - - - - 4.26
AMTR_s00116p00145580 (evm_27.TU.AmTr_v1.0_scaffold00116.50)
- - - - -4.24 - - - - -5.36 0.97 - -2.9 - - - -0.5 - - - - 4.26
AMTR_s00117p00129740 (evm_27.TU.AmTr_v1.0_scaffold00117.59)
- - - - - - - - - - - - - - - - - - - - - 4.46
AMTR_s00171p00044550 (evm_27.TU.AmTr_v1.0_scaffold00171.24)
- - - - -2.72 - -5.36 - -6.06 -4.96 -6.85 -6.62 -2.88 -7.03 -3.81 - -8.76 - - -6.8 -6.97 4.43
AMTR_s00174p00051560 (evm_27.TU.AmTr_v1.0_scaffold00174.19)
- - - - -6.37 - -9.05 - -8.77 -8.31 - -7.02 -11.48 -12.14 -8.1 - - - - -9.55 - 4.46
AMTR_s00193p00042760 (evm_27.TU.AmTr_v1.0_scaffold00193.11)
- - - - - - - - - 0.82 - - - - - - - - - - - 4.34
AMTR_s00436p00008110 (evm_27.TU.AmTr_v1.0_scaffold00436.1)
- - - - -4.54 - -3.37 - -1.86 -3.56 - - -4.15 - - - - - - - - 4.42
AMTR_s00913p00008360 (evm_27.TU.AmTr_v1.0_scaffold00913.1)
- - - - -5.92 - - - -6.05 -6.07 -5.83 1.56 -5.76 - -5.65 1.01 - - - - - 4.08
AMTR_s01187p00010350 (evm_27.TU.AmTr_v1.0_scaffold01187.1)
- - - - 0.52 - - - - - - - - - - - - - - - - 4.36
AMTR_s01279p00002760 (evm_27.TU.AmTr_v1.0_scaffold01279.1)
- - - - -5.54 - - - -7.17 -7.53 -6.02 - -1.42 -5.45 -7.99 - - - - - - 4.43
AMTR_s03703p00003920 (evm_27.TU.AmTr_v1.0_scaffold03703.1)
- - - - -3.93 - - - - - -2.81 - -5.66 -4.33 - -1.23 - -1.22 - - -0.37 4.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.