Heatmap: Cluster_194 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-2.28 -5.37 - -5.0 -3.48 -4.94 -1.79 -0.88 0.6 0.98 1.64 1.13 -2.3 -4.04 -2.19 -4.81 -4.75 -2.42 -1.51 -2.36 -0.28 -2.89 3.24 1.66 -0.38 -1.35
-0.3 -1.44 -1.78 -2.36 -2.23 -2.57 -1.02 0.05 0.4 0.53 1.01 0.81 -0.48 -1.46 -1.71 -1.08 -1.43 -0.57 -0.5 -1.68 -1.39 -1.0 2.43 0.87 1.16 0.69
0.21 0.28 -0.47 0.01 -1.03 -1.99 -0.35 -0.36 -0.3 -0.51 0.13 0.1 -0.33 -1.38 -1.71 -1.69 -0.56 -0.8 -0.68 -1.48 -1.52 0.58 2.29 1.05 0.93 0.22
-4.1 -5.46 - - -2.12 -1.48 -0.09 -1.37 1.11 0.55 -0.25 -0.69 - 0.76 -0.44 0.26 -0.84 -1.09 -3.52 -1.64 0.01 -2.46 2.95 0.85 -0.08 1.13
0.37 -0.12 -0.3 -0.14 -0.25 -0.77 -0.55 -0.43 -0.18 -0.14 0.5 0.5 0.28 -0.87 -1.34 -0.86 -0.89 -0.43 -0.7 -0.8 -0.74 0.4 1.63 1.25 0.27 -0.26
0.02 -0.68 -1.18 -0.91 -1.57 -1.82 -1.19 -0.27 0.02 0.95 0.98 0.74 0.08 -0.36 -1.01 -0.81 -1.66 -0.65 -0.84 -1.16 -1.14 -0.15 2.05 0.4 1.12 0.09
-0.57 -0.69 -0.46 -0.43 -0.67 -0.37 0.19 0.11 0.1 0.01 0.12 0.36 -0.41 -0.54 -0.58 -0.66 -0.25 -0.34 -0.28 -0.32 0.35 -0.37 1.48 1.13 0.03 0.15
-1.52 -1.93 -1.77 -1.46 -1.35 -0.32 -0.42 -1.0 0.06 0.38 0.66 0.38 -1.35 -0.48 -0.83 -1.01 -0.32 0.02 0.28 0.28 0.42 -0.55 1.78 1.57 -0.14 0.38
-0.72 -0.86 -0.83 -0.74 -0.66 -0.66 -0.59 -0.59 -0.0 0.27 0.42 0.68 -0.11 -0.48 -0.12 -0.82 -0.42 -0.11 0.07 -0.17 -0.07 -0.69 1.81 1.07 -0.54 0.39
-0.03 0.13 -0.05 0.05 -0.06 -0.21 -0.0 0.0 0.01 -0.16 -0.15 0.05 -0.32 -0.8 -0.64 -1.3 -0.1 -0.27 -0.26 -0.2 -0.45 0.27 1.47 0.71 -0.16 0.17
1.05 - - -0.45 -0.85 - -0.87 -0.55 -0.16 -0.28 0.26 -2.44 -0.49 -1.15 -2.62 -2.64 -2.33 -0.81 - - 1.04 0.81 3.19 0.23 -1.56 0.66
0.79 -0.2 -0.48 -0.19 0.18 0.09 0.2 0.02 0.2 -0.06 0.07 -0.15 0.62 -0.22 -0.11 -0.46 -0.49 -0.73 -0.49 -0.75 -1.92 -1.22 1.85 -0.4 -0.11 -0.46
-0.63 -0.96 -1.14 -1.11 -0.83 -0.31 -0.09 -0.24 0.15 0.19 0.46 0.5 -0.49 -0.49 -0.84 -0.61 -0.7 0.03 -0.08 -0.43 0.5 -0.83 1.84 1.08 -0.16 0.25
-2.1 -1.46 -1.69 -1.64 -0.76 -0.25 -0.26 -0.33 0.33 0.51 0.27 -0.1 -2.05 -0.65 -0.09 -0.24 -0.38 0.43 0.65 0.14 0.69 -1.34 1.69 0.99 0.2 0.07
-0.22 -0.67 -1.0 -0.72 -1.91 -1.94 -0.7 -0.08 0.17 0.4 0.88 0.7 -0.76 -1.13 -1.47 -2.32 -1.04 0.02 -0.55 -0.73 -0.39 -1.68 2.05 1.34 1.1 0.18
-1.26 -1.17 -1.18 -0.73 -0.22 -0.23 -0.21 -0.23 0.29 0.33 0.59 0.61 -1.06 -0.98 -0.76 -1.07 -1.03 -0.65 -0.49 -0.71 0.35 -1.15 2.19 1.29 0.17 -0.33
-0.33 -4.64 -3.43 -3.78 -2.89 -1.29 0.13 -0.03 0.94 1.27 1.23 1.24 0.06 -4.8 -3.15 -4.12 -2.43 -0.36 -1.36 -1.19 -1.92 -2.75 2.08 1.32 1.24 -0.33
1.01 0.34 -0.42 -0.47 -0.57 -0.52 0.3 0.71 -0.22 0.35 0.31 -0.29 0.45 -1.38 -2.15 0.27 -0.85 -0.25 -0.46 -0.67 -5.18 -2.19 1.99 -0.64 0.46 -0.62
0.4 -0.28 -0.38 -0.18 0.05 -0.23 0.33 -0.09 -0.08 0.12 0.31 0.7 0.68 -1.18 -0.61 -0.84 -1.35 -0.6 -0.28 -1.03 -2.34 -1.37 1.93 -0.48 0.52 0.09
0.4 -1.48 -1.54 -1.77 -2.11 -2.93 -1.46 -1.09 -0.42 1.08 1.2 1.11 0.19 -0.58 -1.09 -0.57 -1.41 -1.8 -1.39 -1.31 -0.67 -1.1 2.42 0.54 0.76 0.24
-0.78 -1.32 -1.9 -0.95 -0.14 0.26 -0.08 -0.2 0.34 0.76 0.9 0.86 -0.61 -2.5 -1.13 -1.59 -1.92 -1.22 -1.09 -0.96 0.08 -1.1 2.4 0.89 -0.21 -0.22
-0.29 -0.71 -1.06 -1.1 -2.18 -2.12 -1.64 -0.71 0.04 0.17 0.8 0.76 -0.17 -1.2 -0.76 -0.47 -0.63 -0.5 -0.34 -0.53 -0.85 -0.2 1.96 1.71 0.51 0.24
-0.64 -1.33 -1.79 -1.39 -1.02 0.03 -0.04 -0.3 0.31 0.32 0.46 0.68 -0.53 -0.8 -0.46 0.12 -0.6 -0.82 -0.58 -1.07 -0.69 0.08 2.27 0.93 0.05 -0.67
-1.47 -2.03 -1.72 -0.95 -0.71 0.45 0.11 -0.25 0.22 0.46 0.38 0.46 -1.18 -0.63 -0.67 -0.2 -0.42 -0.2 0.4 0.19 0.31 0.01 1.4 1.01 -0.51 0.27
1.28 -0.13 -1.48 -1.8 -0.91 -0.62 -0.3 -0.21 0.2 0.07 0.48 0.29 0.63 -0.33 -0.55 -0.87 -0.62 -0.54 -1.64 -1.39 -3.08 -0.87 2.12 0.15 0.74 -0.15
0.06 -1.66 -1.42 -0.91 -1.13 -1.12 -1.26 -1.02 -0.54 0.09 0.69 1.28 -0.26 -0.95 -1.51 -2.14 -3.17 -1.3 -1.8 -2.54 -0.97 -1.76 2.71 2.13 -0.46 -0.41
-2.01 -5.57 -4.23 -4.16 -3.7 -2.36 -1.45 -2.02 0.5 1.38 1.18 0.67 -1.69 -1.92 - -4.34 - -2.73 -2.21 -2.1 0.2 -3.51 2.95 2.25 -0.11 0.02
-1.88 -2.68 -2.66 -2.17 -0.92 -0.07 0.09 -0.44 0.14 0.36 0.22 0.05 -1.79 0.95 -0.74 0.32 0.03 0.07 -0.15 0.03 0.07 -0.74 1.73 1.06 0.07 0.19
-0.96 -1.77 -2.6 -2.16 -1.08 -2.5 -1.2 -0.6 0.7 1.4 1.15 0.79 -0.12 -2.28 -0.23 -4.04 -1.34 0.53 -1.46 -5.15 -3.93 -2.23 2.94 -0.99 -1.02 0.71
-0.53 -3.13 -2.98 -2.05 -1.9 -1.69 -0.15 0.31 0.53 1.13 1.31 1.11 -1.16 -3.33 -2.56 -2.31 -1.82 -0.29 -0.75 -0.57 -1.57 -1.78 2.66 0.74 -0.38 0.19
1.62 -0.41 - - -0.76 - -0.45 - - - 1.65 - - - - - - - - - - - 4.0 - - 0.78
-0.5 0.02 -0.08 0.56 0.19 -0.34 -0.08 0.29 0.09 -0.2 -0.26 -0.38 -0.57 -1.35 -0.78 -1.82 -0.79 -0.03 -0.33 -0.53 -4.68 -0.94 1.93 0.5 0.9 0.65
-0.65 -0.62 -0.47 0.02 -0.11 -0.17 -0.24 -0.39 -0.14 -0.01 0.15 0.13 -0.89 -0.46 -0.62 -0.41 -0.73 -0.46 -0.02 -0.55 0.11 -0.12 1.69 0.98 0.17 0.52
-0.29 -0.02 -0.17 -0.57 -0.62 -1.28 -0.59 -0.58 -0.23 0.14 0.24 0.21 -0.29 -0.9 -0.39 0.23 -0.4 0.03 0.07 -0.63 -1.79 -1.38 1.72 0.78 1.17 0.31
-1.11 - -2.36 -2.64 -2.69 - -2.58 -0.26 -2.6 1.04 0.36 0.51 -0.26 -0.61 0.85 -2.45 -1.03 -2.13 - -2.68 -0.18 -1.91 2.93 -0.4 1.77 0.85
-5.42 - - - -7.0 -3.7 -0.77 -2.01 -0.04 1.14 0.89 -0.16 -4.53 -2.36 -6.95 -5.14 - 1.35 -2.95 -1.68 -4.16 -3.3 3.59 1.44 -1.27 -0.88
-1.67 -3.29 -2.09 -1.47 -1.33 -1.7 -0.82 -0.5 0.05 0.56 0.93 0.88 -0.94 -0.39 -1.19 -0.82 -1.03 -0.32 -0.9 -0.89 0.74 -0.53 2.01 1.55 0.33 0.6
-0.75 -2.14 -3.59 -2.95 -1.81 -0.86 0.17 -0.05 -0.06 0.43 0.21 -0.18 -0.86 0.74 -0.96 -0.3 -0.21 0.34 0.14 -0.21 0.46 -2.59 2.08 1.0 -0.03 0.37
0.24 0.15 -0.08 -0.33 -0.63 -0.72 -0.07 -0.15 0.21 0.25 0.51 0.77 0.09 -0.98 -0.58 -0.86 -0.81 -0.23 -0.35 -0.69 -1.45 -0.56 1.68 0.73 0.28 -0.64
0.19 -0.17 -0.25 -0.39 -1.49 -1.75 -0.76 -0.51 -1.39 -0.33 0.0 0.42 0.46 -1.43 -1.83 -1.4 -0.93 -0.65 -0.51 -1.01 -2.66 -1.95 2.56 0.13 1.74 0.49
0.02 -0.48 -0.42 -0.54 -0.4 -0.87 -0.18 -0.2 -0.11 0.25 0.37 0.76 0.02 -0.47 -1.3 -0.55 -0.9 -0.44 -0.72 -0.65 -0.83 0.38 1.65 0.63 0.74 0.14
-1.23 -0.06 -0.38 -0.23 -0.78 -1.01 -0.85 -0.57 -0.1 0.25 0.6 1.08 -1.31 -1.52 -1.73 -1.85 -1.26 -0.31 -0.34 -1.32 -1.26 -1.51 2.42 1.42 0.21 0.34
-0.19 -0.91 -1.72 -1.26 -0.31 0.05 0.27 0.16 0.46 0.71 0.88 0.75 -0.82 -1.06 -2.14 -1.94 -1.02 -0.68 -0.85 -0.65 -2.52 -0.56 1.7 1.39 0.52 0.23
-1.07 -1.1 -1.46 -1.01 -1.46 -1.61 -1.6 -0.61 0.33 0.15 0.44 0.36 -1.19 -1.58 -1.2 -0.86 -0.7 -0.16 -0.42 -0.61 -2.45 -1.51 2.29 1.06 1.71 1.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.