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Heatmap: Cluster_30 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.7 -0.24 -0.59 -0.17 -1.05 -1.79 -1.16 -0.87 -0.98 -1.02 -0.01 0.49 0.92 -0.89 -1.88 -1.74 -1.51 -0.36 -1.32 -2.16 0.28 1.92 0.97 0.58 1.2 0.41
-0.23 -0.27 -0.28 -0.57 -0.99 -1.42 -0.54 -0.5 -0.67 -0.38 -0.42 -0.5 -0.01 0.31 0.44 0.52 -0.12 0.33 0.08 -0.52 0.2 1.7 0.28 0.01 -0.08 0.25
-0.64 -0.23 -0.39 -0.05 -0.49 -1.24 -0.84 -0.28 -0.32 -0.37 -0.09 -0.4 -0.11 0.74 0.47 1.2 -0.92 0.86 -0.07 -2.17 -0.96 1.45 -0.05 -0.03 0.31 -0.38
0.2 0.01 -0.54 -0.3 -0.22 -0.87 -0.31 -0.5 -0.58 -0.14 -0.13 -0.17 0.05 -0.06 -0.21 -0.21 -0.32 0.25 -0.09 -0.57 1.64 0.68 -0.12 -0.32 0.28 0.06
-0.13 -0.37 -0.6 -0.66 -0.86 -1.58 -0.48 -0.63 -0.95 -0.39 -0.47 -0.52 -0.46 -0.19 -0.13 0.06 -0.27 0.13 0.27 -0.51 1.89 1.22 0.22 -0.29 0.73 -0.0
-0.15 -0.59 -0.87 -0.91 -1.09 -1.75 -0.71 -0.78 -1.22 -0.39 -0.6 -0.71 -0.73 0.0 0.07 0.17 0.09 0.32 0.28 -0.41 2.03 1.06 0.11 -0.14 0.68 0.17
-0.49 -0.9 -1.12 -1.25 -1.54 -2.05 -1.21 -1.21 -1.58 -0.73 -1.18 -1.06 -1.2 -0.03 0.07 0.07 0.07 0.23 0.13 -0.46 2.32 1.43 0.39 0.06 0.78 0.33
-0.36 -0.82 -0.96 -1.2 -1.27 -2.08 -1.1 -1.15 -1.76 -0.71 -0.96 -0.9 -1.04 0.15 0.07 0.09 0.19 0.4 0.07 -0.25 2.19 1.29 0.2 -0.31 0.91 0.34
-0.26 -0.59 -0.76 -1.04 -1.34 -1.71 -0.99 -0.98 -1.28 -0.74 -0.96 -0.81 -0.95 0.23 0.41 0.22 0.3 -0.04 0.04 -0.17 1.91 1.16 0.23 0.07 0.96 0.2
-0.15 -0.29 -0.67 -1.11 -1.02 -1.22 -0.97 -0.66 -1.28 -0.98 -0.78 -0.61 -0.73 0.2 0.51 0.33 0.11 -0.2 -0.07 0.17 1.89 1.16 -0.15 -0.46 0.76 0.3
0.0 -0.77 -0.43 -1.16 -0.79 -1.07 -0.71 -0.76 -1.14 -0.82 -1.08 -0.77 -0.9 0.13 0.52 0.28 0.24 -0.33 -0.3 -0.05 1.76 1.26 0.12 -0.27 0.84 0.45
0.03 -0.16 -0.3 -0.43 -0.69 -0.74 -0.7 -0.56 -0.74 -0.4 -0.78 -0.33 -0.49 0.36 0.47 0.17 0.25 -0.5 -0.17 0.05 1.43 0.85 -0.09 -0.05 0.71 -0.1
-0.04 -0.14 -0.52 -0.7 -0.75 -0.84 -0.79 -0.87 -1.04 -0.71 -0.9 -0.48 -0.78 0.07 0.33 -0.16 0.17 -1.13 -0.59 -0.15 1.71 1.35 0.25 -0.36 1.14 0.36
-0.09 -0.23 -0.44 -0.72 -0.79 -0.99 -0.65 -0.63 -0.84 -0.7 -0.88 -0.52 -0.54 0.37 0.5 0.06 0.31 -0.52 -0.3 0.0 1.56 1.18 0.06 -0.27 0.76 0.18
0.13 -0.11 -0.24 -0.54 -0.76 -1.09 -0.47 -0.41 -0.93 -0.76 -0.48 -0.14 0.0 0.53 0.68 0.34 0.53 -0.3 -0.32 0.32 1.32 0.58 -0.45 -0.81 0.44 -0.16
-3.6 -4.28 -2.99 -2.31 -2.04 -2.49 -2.05 -2.91 -2.94 -1.65 -2.23 -2.28 -2.75 0.35 0.58 1.66 1.44 1.32 0.73 0.14 0.81 1.66 -1.42 -0.3 1.14 0.61
-2.32 -2.46 -2.13 -1.67 -1.4 -1.58 -1.66 -2.07 -1.85 -1.33 -1.26 -1.43 -2.36 0.64 0.81 1.6 1.07 0.76 0.17 -0.54 0.77 1.58 -1.02 0.32 1.14 0.62
-0.9 -1.07 -1.1 -0.59 -0.46 -0.75 -0.45 -0.48 -0.19 -0.02 0.11 -0.09 -0.65 0.66 0.59 0.75 -0.08 0.59 -0.06 -0.56 -0.35 1.35 0.03 0.37 0.06 0.05
0.06 0.2 0.13 0.25 -0.03 -0.37 -0.31 -0.02 -0.27 -0.39 -0.41 -0.41 -0.13 -0.65 0.25 -0.08 -0.56 0.42 0.21 -0.61 0.29 1.02 0.43 -0.12 0.03 -0.25
0.85 -0.52 -0.98 -0.82 -1.52 -2.07 -1.33 -0.98 -1.14 -0.57 0.27 0.68 1.0 -2.03 -1.16 -2.22 -1.17 -0.43 -1.77 -0.88 0.95 1.83 0.53 0.81 0.82 0.69
-0.13 0.18 0.16 -0.14 -0.89 -1.48 -0.93 -0.37 -0.44 -0.28 -0.1 -0.15 0.2 -0.23 0.47 0.12 -0.5 0.35 0.61 -0.56 -0.02 1.41 0.23 -0.17 -0.17 0.11
0.03 0.44 0.31 0.09 -0.81 -1.17 -0.57 -0.38 -0.26 -0.22 -0.21 0.17 0.43 -0.46 0.38 0.18 -0.59 0.29 0.21 -0.74 0.28 1.09 -0.03 -0.27 -0.13 -0.07
-0.76 -0.41 -0.3 -0.6 -1.47 -2.22 -1.23 -0.87 -0.94 -0.46 -0.63 -0.85 -0.23 0.1 0.59 0.53 -0.01 0.7 0.5 -0.45 0.74 1.39 0.73 0.06 0.35 0.35
-0.19 -1.01 -1.13 -1.15 -0.84 -0.5 -0.04 -0.03 -0.1 -0.62 -0.83 -0.82 0.09 -0.2 -0.1 1.09 -0.55 0.26 -0.1 -1.03 0.76 1.64 0.4 -0.48 0.8 -0.15
0.29 -0.04 -0.48 -0.21 -0.31 -1.51 -1.24 -0.73 -1.25 -0.63 -0.42 -0.32 0.76 -0.12 0.48 0.35 -0.6 0.39 -0.78 -0.53 0.7 1.27 0.38 0.49 0.27 -0.07
0.32 0.05 -0.34 -0.11 -0.15 -1.03 -0.64 -0.59 -0.83 -0.66 -0.33 -0.63 0.76 0.34 0.68 0.76 -0.65 0.31 -0.21 -1.14 0.5 0.73 -0.21 0.18 0.35 -0.21
-0.1 -0.01 -0.07 -0.28 -0.76 -0.97 -0.48 -0.42 -1.27 -1.03 -1.1 -1.22 -0.24 0.75 -0.03 0.37 -0.43 -0.33 -0.39 -0.37 1.45 1.09 0.63 -0.3 0.51 0.5
0.27 -0.15 -0.92 -0.24 -0.91 -0.82 -0.18 -0.03 -2.91 -4.07 -4.03 -3.85 -0.91 1.22 0.82 1.35 -0.01 0.06 0.15 0.06 -0.36 1.6 -1.56 -1.41 0.53 0.94
-0.87 -0.88 -0.8 -0.71 -0.79 -1.18 -0.59 -0.67 -0.67 -0.71 -0.67 -0.92 -0.7 -0.17 0.44 -0.16 0.4 0.69 0.09 -0.54 0.55 1.73 0.62 0.26 0.91 0.24
0.6 -0.03 -0.41 -0.27 0.02 -0.17 -0.24 -0.34 -0.66 -0.9 -0.82 -0.57 0.52 -0.24 -0.24 0.21 -0.83 0.15 -0.12 -1.19 0.46 1.48 0.12 -0.18 0.66 -0.06
- -3.83 - - -4.07 -2.95 - - - -3.08 -4.0 -3.87 -3.07 0.4 0.65 0.83 -1.05 0.41 0.54 -0.26 0.81 2.13 -0.46 -0.45 2.22 2.13
-0.57 -0.28 -0.14 0.25 0.06 -0.42 -0.27 -0.15 -1.15 -1.24 -1.17 -1.3 -0.14 -0.22 0.22 0.09 -0.94 0.28 0.08 -1.41 0.87 1.78 0.03 -0.57 0.79 0.39
-0.79 -0.43 -0.16 -0.17 -0.54 -1.48 -0.5 -0.63 -1.54 -1.28 -1.62 -2.18 -1.0 0.17 0.63 0.71 -0.38 0.62 0.15 -1.14 1.01 1.72 0.1 -0.13 0.76 0.61
-0.65 -0.98 -0.91 -0.62 -0.34 -0.01 0.14 0.04 0.27 -0.28 -0.35 -0.87 -1.27 -0.61 -0.58 -0.32 -0.52 0.33 0.24 -0.45 0.71 1.89 0.26 -0.52 0.68 0.2
-0.56 -0.78 -1.03 -0.58 -0.36 -0.84 -0.42 -0.19 -0.11 -0.46 -0.08 -0.48 -0.71 -0.07 0.49 0.19 -0.26 0.62 0.48 -0.61 0.29 1.05 0.77 0.71 0.03 0.17
-0.14 -0.42 -0.27 -0.2 -0.36 -0.8 -0.41 -0.27 -0.64 -0.4 -0.48 -0.52 -0.14 0.26 0.51 0.4 -0.02 0.67 0.4 -0.23 0.21 1.13 0.13 -0.16 -0.13 0.09
0.42 -0.46 -0.64 -1.14 -2.5 -3.23 -1.82 -1.41 -2.6 -1.9 -1.71 -1.37 0.39 0.77 0.65 1.12 0.15 0.64 0.32 0.11 0.58 1.3 -0.58 -0.01 0.79 0.75
0.25 -1.03 -1.26 0.03 -0.65 -1.57 -0.62 -0.56 -0.79 -0.14 0.35 0.64 0.34 -1.03 -1.66 -1.79 -0.76 -0.73 -1.23 -1.41 1.63 1.49 0.72 0.27 0.9 0.35
-0.7 -0.79 -0.46 -0.25 -0.3 -0.65 -0.42 -0.45 -0.82 -0.69 -0.85 -0.77 -0.38 0.41 0.57 0.81 0.12 0.32 0.43 -0.33 -0.03 1.54 0.43 -0.06 -0.16 0.11
0.54 -0.55 -1.36 -1.48 -1.25 -0.88 -0.13 -0.14 -0.66 -0.93 -1.13 -1.26 0.36 0.05 0.36 0.08 -0.48 0.81 0.6 -0.99 0.7 1.81 0.15 -0.32 0.26 -0.14
-1.18 -0.24 -0.88 -0.58 -0.25 -0.5 -0.5 -0.37 -0.32 -0.47 -0.7 -1.08 -1.08 -0.07 0.24 0.6 -0.84 0.94 0.38 -1.04 0.59 2.06 -0.02 -0.22 -0.25 0.14
-0.28 -0.53 -0.55 -0.39 -0.3 -0.23 -0.35 -0.31 -0.24 -0.25 -0.21 -0.17 -0.4 0.17 0.09 1.01 -0.17 -0.46 -0.28 -0.39 0.7 0.65 0.42 0.21 0.34 0.3
-0.13 -0.33 -0.75 -0.35 -0.44 -0.72 -0.27 -0.09 -0.31 -0.06 -0.16 -0.01 -0.41 0.27 0.7 0.13 -0.45 0.5 -0.33 -0.55 -0.23 1.52 -0.09 -0.07 0.32 -0.05
0.23 -0.44 -0.47 0.43 0.26 -0.52 -0.22 0.12 -0.17 0.15 0.47 0.26 0.41 -0.47 -1.2 -0.65 -0.38 -0.83 -1.59 -1.47 0.76 0.84 0.31 0.16 0.52 0.22
-0.59 -0.53 0.06 -0.1 -1.22 -2.13 -1.19 -0.71 -1.15 -0.76 -0.54 -0.31 -0.15 1.0 0.78 0.98 -0.63 -0.13 -0.7 -1.03 1.46 -0.01 0.5 0.41 0.44 0.43
-2.47 -1.15 -0.94 -1.13 -1.54 -2.07 -1.12 -0.67 -0.73 -0.41 -0.39 -0.34 -1.91 0.38 0.76 0.85 0.03 0.8 0.38 -0.65 0.65 1.75 0.98 0.03 0.28 -0.15
-0.64 -1.28 -0.87 -1.12 -1.48 -1.06 -1.18 -1.13 -1.38 -2.03 -2.32 -2.15 -1.09 1.23 0.66 1.13 0.08 0.28 0.51 0.36 -0.6 1.85 -2.03 -0.11 0.84 1.23
0.05 0.01 -0.19 0.19 -0.66 -1.48 -1.25 -1.11 -1.16 -0.68 -0.08 -0.04 0.43 -0.75 -0.71 -0.87 -0.39 0.33 -1.07 -1.01 0.73 1.53 0.15 0.84 1.06 0.52
0.35 -0.03 0.04 0.29 -0.45 -1.88 -1.27 -0.99 -1.23 -0.69 0.01 0.01 0.36 -0.49 -0.61 -0.55 -0.13 0.12 -1.01 -0.99 0.57 1.71 0.39 0.63 0.37 0.33
-0.37 -0.37 -0.6 -0.19 -0.24 -0.7 -0.54 -0.28 0.09 -0.14 -0.19 -0.19 -0.45 0.0 0.25 0.01 -0.67 0.87 0.13 -0.94 0.37 1.41 0.13 -0.15 0.42 -0.08
0.22 -0.14 -0.26 -0.25 -0.52 -1.12 -0.81 -0.79 -0.8 -0.69 -0.52 -0.38 0.17 0.41 0.08 0.47 -0.19 0.0 -0.02 -0.64 0.71 1.13 0.34 0.26 0.49 0.26
0.26 -0.76 -1.33 0.28 0.03 -0.57 -0.31 0.56 0.11 0.18 0.22 -0.45 -0.28 -0.8 -1.7 -1.44 -2.61 -0.42 -1.63 -2.55 1.1 1.54 0.56 0.35 0.99 0.3
0.4 -0.74 -0.98 -0.13 -0.23 -0.86 -0.21 -0.01 -0.43 0.08 0.36 0.82 0.59 -0.94 -1.2 -0.79 -1.18 -1.02 -1.19 -0.98 0.86 1.6 -0.03 0.37 0.57 0.03
0.39 -0.65 -0.8 -0.37 -0.55 -0.91 -0.23 -0.25 -0.67 -0.18 0.32 0.69 0.48 -0.77 -0.81 -0.64 -0.95 -0.56 -0.97 -0.8 0.97 1.57 0.14 0.2 0.36 0.58
0.27 -0.85 -0.76 -0.45 -0.58 -1.06 -0.42 -0.13 -0.68 -0.08 0.34 0.63 0.51 -0.87 -1.02 -0.46 -0.88 -0.76 -0.97 -1.0 1.09 1.55 0.27 0.22 0.58 0.54
0.43 -0.25 -0.23 0.28 0.01 -0.9 -0.28 -0.05 -0.47 -0.14 0.28 0.38 0.16 -0.12 -0.72 -0.59 -0.5 -0.92 -0.76 -0.95 0.87 1.22 0.17 -0.05 0.36 0.12
-0.16 -0.88 -0.91 -0.76 -0.78 -1.63 -1.15 -0.7 -1.27 -0.56 -0.4 -0.5 -0.99 0.33 -0.65 0.07 0.13 0.14 -0.09 -0.65 1.63 1.69 0.55 0.16 0.47 0.49
-0.65 -0.81 -0.48 -0.39 0.05 0.12 0.19 0.2 -0.49 -0.79 -0.84 -0.88 -0.68 0.29 0.34 0.56 -0.04 0.37 0.29 -0.24 0.29 1.62 -0.3 -0.89 0.17 -0.29
-0.75 -1.06 -0.83 -0.68 -0.18 -0.02 0.06 -0.02 -0.62 -1.0 -0.92 -1.37 -1.32 -0.05 0.13 0.42 -0.26 0.19 0.45 -0.63 0.48 1.95 0.21 0.07 0.36 0.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.