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Heatmap: Cluster_17 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - -0.38 2.2 2.86 - 0.39 0.98 - - - - - - - - - -0.03 -0.69 0.63 -0.3 0.13 1.72 - - 0.81
-2.09 -1.51 -1.46 -1.51 -1.54 -1.11 -1.93 -1.16 -1.02 -1.77 -1.57 -1.38 -2.56 1.77 1.72 1.59 1.44 1.2 -0.36 -1.11 -1.54 1.59 -1.44 -2.38 -0.16 -0.45
-0.56 -0.15 0.44 1.0 1.56 1.58 0.82 0.29 -1.22 -1.59 -2.01 -2.15 -0.09 0.05 -0.7 0.68 0.49 -0.24 -0.49 -0.56 -3.37 -0.05 -1.68 -3.59 -0.17 -0.47
-1.12 -1.13 -0.75 0.33 0.55 0.28 0.17 0.21 -0.19 -0.11 -0.04 -0.5 -0.82 0.87 1.03 0.32 -1.52 -1.08 -1.31 -1.92 -3.24 1.63 -2.36 -1.24 1.15 0.66
-0.83 -0.8 -0.41 0.28 0.36 0.45 0.56 0.21 -0.2 -0.31 -0.2 -0.58 -0.65 1.21 1.35 0.7 -1.31 -1.05 -1.12 -1.54 -3.7 0.97 -2.28 -1.81 0.83 0.33
-2.7 -2.08 -1.49 -0.48 0.21 0.8 0.76 -0.01 -0.57 -0.23 -0.23 -0.47 -2.95 1.18 1.31 0.5 -0.72 -0.78 -0.81 -0.9 -3.04 1.82 -1.31 -1.41 0.73 0.24
-2.45 -4.67 -1.66 -0.3 0.1 0.54 0.01 -0.36 -0.17 0.11 -0.37 -1.06 - 1.04 0.39 0.9 -0.63 -0.08 -0.58 -0.68 -2.31 2.58 -1.2 -1.6 -0.14 0.18
-3.17 -1.65 -1.25 0.37 1.8 2.27 1.67 0.45 -0.84 -1.46 -1.95 -1.91 -2.73 0.8 -1.45 -0.27 -2.76 -2.21 -1.98 -2.11 -3.76 1.45 -1.33 -3.28 0.73 -0.59
0.16 0.11 0.24 0.46 0.74 0.51 0.09 -0.23 -0.23 0.05 -0.17 -0.16 0.14 -0.09 0.45 0.36 -0.17 0.19 0.4 0.21 -2.11 -0.76 -0.96 -0.51 -0.71 -0.48
- 0.48 1.6 2.44 1.75 1.93 0.62 -3.49 -2.52 -3.62 -3.54 -2.42 - -2.39 - - -3.28 -1.85 -0.11 1.95 -0.36 -0.85 - -3.09 - -
-2.54 -0.16 1.0 1.53 2.07 2.05 1.95 1.76 0.95 0.07 -1.21 -2.25 -3.2 - -9.85 - - - -9.12 -9.14 -7.22 -4.47 -5.46 -1.83 -1.4 -9.34
-3.55 -1.4 -1.03 0.25 1.92 2.29 1.74 0.79 -0.63 -1.38 -1.81 -1.83 -2.41 0.94 -2.68 -0.64 -2.23 -1.18 -2.07 -2.45 -4.05 0.81 -2.0 -4.65 0.71 -0.32
0.89 1.03 - 1.92 1.95 1.91 - 0.92 - - - - 0.79 - - - - - 0.89 0.52 - - 1.92 - - -
-4.95 0.15 0.61 2.36 2.62 1.87 1.52 0.13 -1.32 -2.4 -4.37 -4.78 -2.33 -4.35 -2.82 -4.16 -3.13 -2.18 -2.54 -1.45 -0.36 -2.34 -1.89 -3.96 -0.01 -2.91
0.47 0.5 0.64 1.44 1.65 0.49 -0.04 -0.21 -1.44 -1.3 -1.35 -1.43 0.15 0.15 -0.57 0.05 -0.46 -0.44 -0.44 -1.1 -3.57 0.77 -1.18 -1.5 0.23 -0.58
-1.1 -0.83 -0.55 -0.12 0.45 0.83 1.49 1.05 0.57 0.49 0.43 0.09 -0.7 -0.38 -0.29 -0.86 -0.2 -0.3 -0.23 -0.03 -2.38 -0.1 -0.41 -1.49 -0.1 -0.7
-0.81 -1.0 -0.6 -0.29 0.27 0.57 1.24 1.05 0.28 0.3 0.19 -0.22 -1.09 -0.16 -0.28 -0.39 0.11 -0.13 -0.24 -0.08 -2.07 0.51 0.14 -0.59 0.01 -0.49
-1.16 -1.0 -0.47 -0.27 0.12 0.44 1.22 0.93 -0.02 0.27 0.18 -0.43 -1.05 0.23 0.18 -0.02 0.36 0.5 0.16 0.34 -2.16 -0.21 -0.4 -1.74 0.21 -0.72
-1.65 -0.88 -0.87 0.39 1.01 0.99 0.85 0.54 -0.01 0.22 -0.42 -0.47 -1.4 0.34 0.21 0.3 -0.87 0.35 0.06 -0.21 -0.7 -2.25 0.66 -0.65 -0.7 -0.03
- - - - - - - - - - - - - - - - - - - - - - - - - -
-2.85 0.53 0.45 1.86 2.26 1.13 0.57 -1.1 -1.37 - -1.88 -3.75 -2.65 -1.32 -0.95 -0.74 -3.87 -0.75 -0.17 0.6 0.99 -1.43 0.5 -3.94 -2.29 -0.05
- -2.42 1.2 2.0 2.74 2.55 2.01 0.34 -1.88 -2.74 - - - - - - - -4.58 -3.3 -0.23 - -1.92 - - - -
-4.12 -0.75 1.04 1.38 1.52 1.0 0.84 0.17 -0.39 -0.48 -0.18 -0.94 -2.64 0.58 0.23 0.02 -0.09 -0.37 -0.04 0.26 -4.62 -2.06 -2.68 -0.59 -1.58 -0.23
-1.32 0.11 0.7 1.57 1.39 0.39 -1.33 -1.48 -2.17 -1.3 -0.29 -0.14 -1.3 -1.51 -1.19 -1.28 0.45 -0.47 -0.31 0.08 -3.28 0.93 1.08 0.55 -0.39 -0.02
-0.49 -0.86 -0.77 -0.39 0.32 0.94 1.08 0.66 0.74 -0.1 -0.57 -0.93 -0.32 0.87 0.33 0.38 0.0 -0.02 -0.48 -0.33 -3.62 -0.44 -0.64 -1.62 0.42 -0.12
-4.68 -5.9 -4.41 -2.44 0.3 1.88 1.99 0.26 1.4 -0.39 -1.53 -2.85 -4.39 1.31 0.42 -0.25 -0.78 -2.1 -1.6 -1.36 -4.96 1.99 -0.69 -1.8 -1.22 -2.44
-4.94 -6.36 -5.46 -2.76 0.05 1.55 1.82 0.27 1.18 -0.55 -1.72 -2.7 -5.1 1.14 0.12 -0.43 -0.85 -1.68 -2.01 -1.59 -4.25 2.62 -0.15 -1.62 -0.94 -2.06
-5.31 -6.82 -5.65 -2.62 0.19 1.56 1.79 0.26 0.87 -0.79 -1.84 -3.5 -6.29 1.21 -0.0 -0.32 -1.1 -1.59 -2.48 -1.97 -4.35 2.69 0.23 -1.0 -0.79 -2.68
0.28 0.32 0.33 0.45 0.67 0.52 0.2 -0.03 -0.54 -0.38 -0.27 -0.05 0.72 0.07 -0.39 -0.05 0.21 -0.41 -0.79 -0.62 -2.64 0.75 -1.09 -1.02 0.27 -0.11
-0.32 0.5 0.88 1.55 1.98 1.91 0.76 0.04 -2.56 -2.64 -2.72 -2.69 -0.57 -1.29 -1.19 0.47 -0.09 -0.63 -0.62 -0.33 -5.71 -1.88 -5.07 -3.42 0.17 -1.06
-2.11 -1.46 -0.69 -0.3 0.79 1.79 0.96 0.27 0.39 0.1 -0.25 -0.76 -2.11 -0.46 -0.4 -0.82 -0.63 -0.33 -0.25 -0.16 -0.81 1.51 -0.02 -1.31 -0.41 -0.3
-0.74 -1.48 -1.1 -0.4 0.28 1.19 2.0 1.12 0.39 0.02 -0.18 -0.31 -0.63 0.24 -1.52 0.08 -1.42 -1.13 -1.16 -1.24 -2.27 0.48 0.73 -1.32 -0.06 -0.82
-1.8 0.45 0.65 1.43 1.82 0.5 -0.49 -1.65 -1.09 -0.94 -1.96 -1.29 -2.23 0.95 -0.29 0.96 0.12 -1.1 -1.36 -0.74 -4.25 1.27 -0.8 -3.09 -0.38 0.1
1.88 - - 1.11 2.72 1.05 - - 1.16 - - - 0.93 0.45 - - - - - 2.24 - - 0.37 - - -
-3.01 -3.31 -1.37 -0.67 0.56 1.06 0.83 -0.21 1.46 -0.04 -0.21 -0.63 -2.57 0.59 0.6 -0.05 -0.34 -0.59 -0.39 -0.67 -2.36 0.62 0.19 -0.06 0.12 0.49
- -0.93 -0.59 0.7 2.78 2.3 2.27 1.78 0.45 -4.67 -3.07 -3.49 - -3.94 - - -2.8 -2.55 -3.35 - - -4.84 -3.14 -0.39 -3.67 -4.0
-3.5 -4.93 -2.01 -1.04 0.1 1.19 0.87 0.17 0.32 0.07 0.15 -0.07 -1.93 -0.12 -0.93 -0.45 -0.76 -0.77 -0.62 -0.48 -1.39 2.11 0.14 0.61 -0.24 0.38
-0.93 -0.95 -1.18 0.78 1.65 0.91 0.51 0.48 -0.13 -0.48 -0.58 -0.73 -0.56 -2.84 -2.32 -2.76 -3.37 -2.19 -2.25 -2.93 -0.84 2.8 0.1 -1.17 -0.67 -0.82
0.68 0.47 0.61 1.33 1.32 1.06 0.54 0.16 -1.57 -1.56 -1.78 -0.96 0.62 -0.07 -1.74 -0.27 -1.64 -1.68 -1.94 -1.98 -2.75 1.46 -1.34 -3.04 0.17 0.04
-0.18 -0.39 1.11 1.53 2.12 1.48 0.75 -0.75 -1.24 -3.67 -0.43 -0.46 -1.38 -4.14 -0.47 0.15 -3.33 -0.14 -0.53 0.44 -0.28 -1.81 -0.04 -1.16 -4.23 -
-3.82 -0.48 -0.36 1.85 2.97 1.95 1.31 0.79 -0.81 -1.07 - -1.98 -4.49 - -2.65 -3.12 -2.23 -0.56 -1.66 -1.29 -0.82 -3.81 -0.35 -2.64 -5.56 -3.77
-1.67 -1.48 -1.55 -0.47 1.14 1.89 1.71 1.19 0.43 -0.27 -1.15 -1.92 -2.65 0.58 0.44 1.15 -1.12 -0.99 -1.76 -1.65 -2.92 0.35 -1.75 - -0.1 -1.18
-2.0 -2.08 -2.31 -1.11 0.93 1.62 1.44 0.72 -0.14 -0.66 -1.12 -2.12 -4.37 1.04 0.59 1.33 -0.9 -0.48 -1.09 -0.76 -2.95 0.82 -0.78 -3.29 0.52 -0.27
-3.87 -2.82 -2.66 -1.52 0.82 1.69 1.51 0.44 0.13 0.4 0.35 -0.07 -2.9 0.55 0.24 0.4 -2.05 0.56 -0.14 0.46 -1.96 -0.7 -0.47 -1.01 -0.39 -1.02
-0.12 0.9 0.61 1.04 1.07 0.38 0.01 -0.23 -0.7 -1.06 -1.25 -1.58 -0.47 0.38 0.14 0.22 0.7 0.19 -0.02 -1.02 -5.93 0.23 -2.42 -1.62 0.63 -0.41
-2.08 0.04 1.13 1.42 1.76 1.48 0.48 -0.76 -0.93 -1.51 -1.68 -1.91 -2.16 -0.69 -0.79 -1.04 -2.24 -0.8 -0.8 -0.42 0.76 -0.83 1.06 -0.13 -1.18 -0.89
-2.0 0.42 1.3 1.74 1.96 1.59 0.77 -0.83 -0.75 -1.88 -1.89 -1.87 -2.65 -0.97 -1.58 -1.68 -2.56 -1.17 -0.75 -0.12 0.56 -1.73 0.76 -1.18 -2.21 -1.16
-3.67 -0.32 1.44 1.74 2.04 1.47 0.81 -0.27 -0.21 -0.14 -0.35 -1.26 -3.62 -0.79 -1.63 -0.69 -1.24 0.11 -0.62 0.31 -1.95 -1.61 -2.09 -3.17 -1.07 -1.99
-2.67 -0.15 0.87 1.18 1.18 1.2 0.54 -0.71 -0.11 0.25 -0.98 -0.01 -2.6 0.67 0.33 0.48 -0.11 0.02 0.28 0.65 -3.84 -1.38 -3.42 -1.58 -2.09 -1.54
-2.68 0.18 1.76 2.37 2.43 2.11 1.32 -1.61 -1.99 -3.85 -3.78 -1.96 -5.86 -4.8 -2.6 -2.23 -3.94 -1.39 -1.37 0.01 -1.63 -2.73 -2.51 - -4.84 -4.64
-4.19 0.26 1.58 1.67 2.49 1.77 0.65 -2.02 -1.14 -1.95 -2.45 -3.43 -3.08 -2.8 -2.34 -2.3 -3.36 -1.67 -0.65 -0.77 1.27 -0.63 -0.78 -1.58 -3.76 -1.41
-1.19 -3.69 -2.19 -1.21 0.5 1.32 1.89 0.71 -0.41 0.42 0.44 0.03 -0.75 1.81 -0.66 0.47 -1.55 -1.48 -1.35 -1.31 -2.74 -0.82 -2.63 -2.62 0.39 0.2
-1.01 -2.91 -1.91 -0.84 0.78 1.69 2.09 0.79 0.22 0.58 0.56 0.38 -0.56 1.18 -1.03 -0.2 -2.27 -2.32 -1.87 -1.67 -3.4 -1.01 -2.46 -1.94 -0.24 0.0
-2.27 -1.17 0.69 0.85 0.84 0.79 0.36 -0.12 0.08 0.0 -0.26 -0.46 -1.63 0.02 -0.68 -0.25 -0.68 -0.13 -0.16 0.07 0.5 -0.14 1.04 -0.94 -0.53 -0.5
-1.16 -0.46 -0.2 -0.15 0.67 0.66 0.71 0.26 -0.34 -0.36 -0.47 -0.26 -1.17 0.37 0.31 0.27 -0.25 0.45 0.36 -0.57 -0.64 -0.81 0.34 -0.57 0.54 -0.06
-0.36 -0.58 -1.16 -0.45 0.18 0.32 0.96 0.88 0.35 0.07 -0.11 -0.18 -0.21 1.09 -0.04 0.47 -0.44 -0.48 -0.17 -0.5 -0.41 -0.97 0.08 -0.24 -0.25 -0.59
-0.52 -0.46 -1.2 -0.46 0.09 0.13 0.86 0.73 -0.12 0.08 -0.04 -0.5 -0.27 1.27 -0.17 0.83 -0.21 0.08 -0.07 -0.34 -0.31 -1.71 0.35 -0.56 -0.21 -0.65
-3.57 -1.62 -0.27 1.16 1.02 1.14 0.54 -0.61 -1.49 -1.89 -2.16 -1.81 -5.28 0.73 0.76 0.34 -0.41 1.05 -0.01 0.39 0.4 -1.76 1.25 -1.28 -2.2 -0.65
-2.59 -1.42 -0.33 0.84 1.37 1.68 0.92 0.25 -0.38 0.08 0.02 -0.56 -2.54 -0.88 -1.67 -0.54 -1.15 -1.44 -0.43 0.09 -3.48 2.01 -3.16 -1.35 -0.35 -0.42
-3.57 -1.08 -0.29 0.51 1.27 1.16 0.69 -0.04 -0.41 0.14 -0.33 -1.08 -2.92 -0.35 -0.97 -0.49 -1.08 -0.44 -0.6 0.35 -2.94 2.03 -2.68 -1.51 0.64 0.35
- - 1.57 2.47 2.85 - 0.46 - - 0.4 - - - - - - - -0.3 - 1.07 -0.49 - 0.94 1.05 - -
0.29 -0.21 -0.4 0.71 1.6 0.87 0.45 -0.07 -0.52 -0.6 -0.57 -0.32 0.58 -0.19 -1.24 0.13 -1.84 -2.54 -1.39 -2.01 1.21 0.68 0.75 -1.96 -1.43 -1.68
-1.35 0.41 -0.32 1.93 2.33 1.63 0.55 0.13 -1.08 -0.48 -0.39 0.39 -0.88 -1.43 -2.42 -0.22 -0.82 -1.91 -0.53 -0.67 -2.54 -3.56 -2.14 -1.18 -2.26 -1.11
0.86 0.37 0.62 0.67 0.63 0.15 -0.01 -0.12 -0.99 -1.05 -1.09 -0.68 1.0 0.19 0.83 -0.24 -0.29 -0.18 -0.6 -1.14 -2.28 0.74 -1.33 -1.17 -0.19 -0.1
-0.49 -0.52 -1.01 -0.69 0.13 0.52 0.32 -0.16 -0.98 -1.69 -1.73 -1.97 -0.47 1.23 1.44 1.29 0.0 0.24 0.09 -1.07 -4.48 1.87 -1.29 -2.49 -0.32 -1.36
0.55 0.06 0.07 0.11 0.13 -0.22 0.17 0.29 -0.18 -0.1 -0.16 -0.11 0.77 0.15 -0.13 0.32 -0.45 -0.05 -0.37 -0.47 -1.36 0.56 -0.47 -0.6 -0.1 0.09
0.47 0.22 0.35 0.55 0.7 0.14 -0.4 -0.38 -0.88 -0.61 -0.41 -0.25 0.96 -1.03 -1.27 -0.91 0.7 -0.79 -1.37 -1.4 1.25 0.81 0.24 -0.15 -0.86 -0.86
-3.3 -7.22 -6.31 -2.85 -0.44 0.45 1.02 0.67 -0.32 -0.79 -0.77 -1.13 -1.11 1.06 1.19 -0.17 0.62 -0.59 -0.93 -1.49 -4.75 1.75 -1.27 -2.96 1.69 0.71
-0.02 -1.13 0.51 2.11 2.76 1.91 1.18 0.55 - -1.82 -3.3 -2.21 0.6 - -3.56 -3.16 - -1.55 -1.08 0.53 - - - - - -
-3.7 -0.58 0.56 1.14 1.51 1.41 0.67 0.25 -0.22 -0.71 -1.05 -1.13 -3.17 0.58 -0.17 0.36 -0.02 -0.55 -0.72 -0.24 -3.62 -0.47 -1.02 -1.04 -0.08 0.32
-3.19 -0.01 1.24 2.55 2.53 2.02 1.13 -0.21 -1.13 -2.46 -3.81 -4.67 - - -3.33 -4.8 - - -3.4 -0.93 0.87 -1.79 -2.89 - -5.39 -
-0.18 0.19 0.15 1.18 0.93 -0.21 -0.35 -0.18 -0.93 -0.75 -0.37 -0.6 -0.2 0.44 -0.73 0.52 -0.33 -0.56 -0.96 -0.8 -1.28 0.61 -0.17 -0.67 1.27 -0.14
-0.7 0.7 0.76 0.52 0.73 0.41 0.6 0.29 0.09 -0.15 -0.35 -0.59 -0.25 -0.78 0.65 -1.15 0.65 0.23 0.32 -0.11 -6.89 0.68 -6.47 -2.05 -0.63 -0.62
- -1.18 1.42 1.86 1.62 2.49 1.34 0.24 -1.2 - -1.36 - -0.89 - -1.41 - - 0.33 - 1.01 - -0.58 -1.7 - - -0.19
- - -3.27 0.58 1.47 1.45 1.23 0.2 -0.63 0.81 0.69 0.41 -1.43 0.68 -2.44 0.53 -2.18 -0.18 -0.27 -1.5 -2.72 -1.46 -0.68 1.14 -1.34 -1.19
-1.2 -0.64 -0.29 0.15 0.94 1.13 1.11 0.62 0.45 0.35 0.11 -0.24 -1.6 -0.36 -1.05 -0.45 -1.23 -0.58 -0.63 -0.78 -1.72 1.69 -0.79 -0.79 -0.57 -0.69
0.86 -1.31 0.44 0.49 1.74 0.83 -1.35 -1.53 - -0.06 -0.55 -0.46 1.29 -2.14 - 0.53 - -2.1 - -1.93 1.69 1.75 0.17 - -2.17 -2.06
-0.41 0.17 0.41 0.98 1.05 0.86 0.54 0.47 -0.96 -0.93 -0.9 -1.03 -0.02 0.24 -0.03 0.35 0.24 -0.61 -0.54 -0.96 -3.91 0.66 -1.81 -0.97 0.31 -0.21
-3.83 -1.95 -2.14 0.21 1.16 1.73 1.27 0.27 0.4 0.51 0.92 -0.09 -2.0 0.61 0.48 -0.11 -1.14 -2.22 -0.7 -1.34 -4.62 1.02 -3.05 -1.13 -0.84 -0.84

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.