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Heatmap: Cluster_129 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.93 0.12 -0.04 -0.33 -0.56 -1.38 -0.63 -0.15 -0.78 -0.08 0.25 -0.14 -0.45 -0.52 -0.18 0.22 0.87 -0.47 -0.99 -0.95 0.54 0.35 0.17 0.3 1.31 0.83
-0.57 0.35 0.18 0.11 -0.26 -0.92 -0.39 0.08 -0.11 0.35 0.59 0.42 0.13 -0.72 -0.21 0.0 0.66 -0.91 -1.17 -1.07 -0.01 -0.3 -0.38 0.09 0.89 0.59
0.87 -0.41 -0.54 -0.76 -1.48 -2.29 -0.85 -0.23 -1.03 -0.46 -0.21 0.21 1.2 0.13 0.8 1.07 -0.58 0.01 -0.24 -0.4 0.73 0.34 -1.39 -0.54 0.33 0.21
0.36 -0.42 -0.62 -0.44 -0.47 -0.57 -0.05 -0.0 0.07 0.3 0.51 0.9 0.91 0.21 -0.76 -0.05 -0.68 -0.42 -0.83 -0.9 0.41 0.16 0.1 0.07 0.01 0.01
0.39 0.15 0.18 0.27 0.11 0.03 -0.05 0.06 -0.25 -0.26 -0.1 -0.11 0.59 0.11 0.17 0.52 0.11 0.05 -0.06 -0.55 -0.16 -0.31 -0.94 -0.38 -0.27 -0.18
0.09 -0.19 -0.12 0.13 0.32 0.35 -0.16 0.03 0.26 0.32 0.65 0.8 0.29 -1.11 -0.57 -1.23 -0.71 -0.66 -0.27 -0.28 -0.07 0.26 -0.06 0.33 0.21 -0.65
0.25 -0.17 0.06 0.15 0.2 0.01 0.12 0.21 0.01 0.04 0.26 0.54 0.79 -0.5 -0.66 -0.43 0.31 -0.86 -0.65 -0.74 -0.77 0.63 -0.25 -0.29 -0.05 0.11
0.78 0.26 0.4 0.54 0.17 -0.23 0.03 0.3 -0.11 0.14 0.34 0.68 1.21 -1.3 -1.75 -1.36 -0.88 -0.78 -0.96 -0.18 0.21 -0.7 -0.03 -0.28 -0.54 -0.01
0.68 -0.0 0.11 0.33 -0.23 -0.32 -0.46 -0.54 0.04 0.71 1.05 1.18 0.66 -0.28 -2.18 0.19 -1.21 -2.65 -2.21 -0.72 -1.07 0.9 0.03 0.05 -0.64 -0.34
1.47 -0.28 -0.95 -0.95 -1.73 -1.11 -0.47 0.72 0.35 -0.09 0.6 0.48 0.96 -2.07 -0.96 -1.69 -1.55 -0.14 -0.52 -1.22 1.18 -0.21 0.51 -0.2 0.32 0.06
0.72 -0.05 0.13 0.16 -0.03 -0.06 -0.05 0.25 0.08 0.05 0.42 0.62 1.01 -0.2 -0.52 -0.48 -0.43 -1.2 -0.74 -0.91 -0.67 0.33 -0.12 -0.22 -0.15 -0.1
0.65 0.18 -0.08 -0.08 0.13 -0.13 -0.26 -0.15 -0.66 -0.57 -0.48 -0.41 0.77 0.16 0.59 0.72 -0.37 0.17 0.24 -0.44 0.07 0.26 -0.55 -0.78 -0.46 -0.23
0.26 -0.95 -0.85 -0.2 -0.25 -0.67 0.11 0.29 0.23 0.12 0.37 0.37 0.67 0.32 -0.28 0.36 -0.68 -0.45 -0.3 -1.04 -0.03 -0.14 0.59 0.16 0.33 -0.19
-0.04 -0.44 -0.44 -0.22 -0.03 -0.25 -0.42 -0.28 -0.18 0.05 0.5 0.53 0.33 0.09 0.07 -0.19 -0.53 -0.34 -0.18 -0.87 -0.31 -0.06 -0.1 1.28 0.14 0.18
-0.27 -0.73 -0.77 -0.69 -0.68 -0.8 -0.62 -0.56 -0.04 0.47 0.85 1.16 -0.32 0.22 -0.55 0.08 -0.17 -0.34 -0.57 -0.44 -0.28 0.95 0.17 0.52 0.16 0.29
0.68 -0.4 -0.58 -0.68 -1.28 -1.57 -1.35 -0.94 -0.36 -0.04 0.67 1.06 0.91 -0.13 -1.16 0.8 0.13 -0.27 -0.6 -0.9 -0.1 0.31 0.36 0.93 0.14 -0.56
0.61 0.08 -0.35 0.05 -0.24 -0.85 -0.2 -0.18 0.35 0.51 0.99 1.31 0.92 -0.83 -1.33 -0.4 -1.48 -1.3 -1.28 -1.37 1.17 -0.83 -1.68 0.73 -0.66 -0.54
0.65 -0.54 -0.22 0.29 0.04 -0.62 -0.21 -0.04 -0.25 0.25 0.93 1.42 1.18 -0.73 -1.88 -1.4 -1.22 -1.48 -1.51 -1.27 0.58 0.62 -0.0 0.14 -0.85 -0.37
-0.01 -0.65 -0.83 -0.35 -0.38 -0.22 -0.07 -0.0 0.23 0.4 0.62 0.38 0.49 -0.21 0.09 0.38 -0.52 0.19 0.09 -0.62 -0.32 -0.95 0.63 -0.24 0.41 -0.17
0.37 -0.0 -0.28 -0.71 -0.87 -0.49 -0.22 0.01 0.7 0.64 0.6 0.33 0.55 -1.01 -0.15 -0.29 -1.35 0.04 -0.22 -0.85 -1.33 -1.09 0.88 0.66 0.81 -0.67
0.49 0.23 0.25 0.33 0.13 -0.03 -0.2 -0.04 0.05 0.16 0.51 0.89 0.87 -0.83 -1.07 0.12 -0.4 -0.65 -1.03 -0.82 -0.64 0.11 -0.1 0.23 -0.52 -0.49
-0.47 -0.89 -0.82 -0.82 -1.37 -1.83 -1.24 -0.94 -0.3 0.59 1.34 1.92 -0.07 -1.26 -1.74 -0.84 -0.86 -0.97 -1.39 -1.38 1.36 0.09 0.56 1.25 -0.31 -0.01
0.63 -0.24 -0.35 0.52 0.32 -1.78 -0.94 -0.03 0.51 0.59 0.81 -0.17 0.99 -1.0 -1.72 -1.31 -2.13 -0.22 -1.32 -1.73 1.2 0.53 -0.69 -0.34 0.89 -0.37
0.33 -0.54 -0.36 -0.21 -0.51 -0.86 -1.04 -0.66 -0.25 0.2 0.62 0.81 0.57 -0.05 -0.3 -0.44 -0.84 -0.43 -0.55 -2.33 0.57 -0.65 0.43 1.31 0.66 0.09
0.2 0.55 -0.03 -0.06 -0.36 -0.76 0.02 -0.23 -0.51 0.14 0.69 1.12 1.43 0.23 -0.49 -0.23 -1.03 -0.52 -1.0 -2.49 -0.27 -2.53 0.19 -0.47 0.08 0.49
-0.94 0.1 0.24 0.15 0.23 -0.07 -0.8 -0.65 0.07 0.81 1.48 1.51 -0.19 -6.42 -7.4 0.62 -3.8 -5.77 -7.58 -3.56 0.66 0.83 -1.3 1.26 -1.08 0.15
-2.35 -0.6 -0.32 -0.39 -0.73 -0.77 -1.01 -0.78 0.07 1.07 1.6 1.58 -2.84 -3.73 -3.69 1.54 -2.2 -4.25 - -3.06 0.84 0.69 -2.42 1.23 -0.07 0.72
-0.44 -1.16 -0.92 -0.69 -0.09 -0.29 -0.61 -0.93 -0.53 0.41 0.82 0.74 -0.45 -2.32 -0.6 1.68 -1.18 -1.48 -1.28 -0.43 -1.57 1.27 -3.42 1.23 0.57 0.88
0.96 1.77 0.54 -0.03 -0.82 -2.55 -3.46 -2.22 -0.77 0.27 0.83 1.03 1.17 -3.59 -5.36 -0.17 -4.06 -4.21 - -3.61 1.21 -0.48 -1.44 1.03 0.01 0.74
0.69 1.33 0.52 0.0 -1.23 -2.72 -4.78 -1.69 -1.3 -0.01 0.85 0.8 0.91 -3.84 -4.88 0.44 -2.2 -5.54 - -4.88 1.47 -0.46 -0.26 1.42 0.29 0.77
0.66 -0.15 -0.46 -0.91 -1.61 -1.91 -0.98 -0.49 -0.5 -0.18 0.34 0.87 0.78 0.16 -0.2 0.97 0.3 0.09 -0.07 -0.31 0.14 -0.57 -0.35 0.58 0.18 -0.19
0.87 0.44 0.47 0.31 -0.21 -1.47 -1.11 -0.16 0.24 0.4 1.2 1.33 1.31 -1.22 -2.74 -1.95 -2.12 -1.4 -1.48 -1.62 0.65 -0.12 -0.82 -0.51 0.4 -0.74
0.92 -0.23 -0.51 -0.23 -0.35 -0.43 0.12 0.3 0.44 0.9 0.99 0.71 0.65 -0.91 -1.06 -1.75 -0.99 -0.88 -0.78 -0.36 0.95 -0.69 -0.32 -1.11 -0.02 -0.12
0.74 0.56 0.42 0.78 0.89 -0.78 -3.07 -3.76 -4.27 -4.08 -4.1 -3.12 1.36 0.67 0.2 -1.06 -1.2 -0.09 -1.62 -1.56 0.03 2.36 0.43 0.33 -2.7 -2.62
0.21 -0.34 -0.13 0.01 -0.14 -0.22 0.3 0.5 0.4 0.56 0.47 0.49 0.51 -0.73 -0.1 -1.08 -1.89 -0.65 -0.77 -1.22 0.33 0.31 0.25 0.21 0.2 -0.3
-1.45 -1.81 -1.9 -0.3 -0.32 -0.39 -0.74 -0.33 0.55 1.12 1.8 2.14 0.04 -0.1 -2.44 -1.57 -1.37 -4.46 -3.36 -3.69 -1.21 0.7 -0.15 1.24 -0.38 -0.75
0.87 0.5 0.59 0.41 -0.35 -1.79 -1.98 -1.05 -1.16 -1.14 -0.48 0.21 1.03 -0.92 -1.06 0.16 -0.69 -0.2 -0.56 -0.23 0.73 1.62 -2.23 -0.99 0.55 0.3
1.23 0.75 0.25 -0.34 -1.77 -3.15 -1.16 -0.21 -0.74 0.01 0.6 0.96 1.97 -0.14 -0.88 -0.56 -0.43 -1.38 -1.45 -1.64 0.5 -0.65 -0.8 -1.01 0.69 -0.68
0.44 -0.69 -1.82 0.74 -1.63 -0.69 - - -0.19 -0.34 0.16 1.08 0.63 -0.29 0.05 -0.68 -0.11 - - - 1.59 - 1.12 0.86 0.99 1.19
-0.12 -0.53 -0.56 -0.61 -1.13 -1.78 -1.47 -0.97 -0.18 0.63 1.44 2.08 0.07 -1.61 -2.39 -1.53 -0.79 -0.68 -1.59 -0.67 -0.58 1.2 -1.12 0.48 0.55 0.77
-0.19 -0.54 -0.43 -0.59 -1.16 -1.94 -1.36 -0.94 -0.17 0.77 1.48 2.1 0.03 -1.15 -1.96 -1.11 -0.25 -0.54 -1.28 -0.11 -1.27 0.81 -1.47 0.67 0.07 0.59
0.32 -2.12 -0.64 0.11 0.67 -0.62 -0.31 -0.59 0.09 -0.06 0.26 0.94 1.12 -0.78 0.34 -1.5 0.2 -1.6 -2.93 -2.96 0.67 -2.58 0.27 1.15 0.43 0.39
0.53 0.63 0.41 0.12 0.08 0.36 0.05 0.14 -0.08 -0.38 -0.42 -0.54 0.25 -0.06 0.37 0.16 -0.18 -0.42 0.06 -0.53 0.13 -0.69 -0.16 -0.43 -0.09 -0.4
0.97 1.93 1.58 1.1 -0.76 -3.6 -3.49 -3.36 -3.64 -3.57 -2.88 -2.11 1.12 -0.66 -2.09 -1.1 -0.61 -1.82 -2.66 -2.68 1.12 2.47 -3.42 -2.73 -1.29 -0.78
0.92 2.44 1.81 1.21 -0.72 -3.19 -3.29 -3.3 -3.67 -2.77 -2.14 -1.43 1.31 -1.93 -1.75 -1.79 -1.43 -2.5 -2.68 -2.54 1.33 1.69 -2.32 -1.65 -1.48 -1.7
0.8 2.36 1.81 1.1 -1.13 -3.28 -3.21 -3.36 -3.44 -3.13 -2.08 -1.43 1.06 -1.47 -1.68 -1.65 -1.62 -2.11 -2.34 -2.53 1.55 1.89 -2.42 -1.78 -1.4 -1.34
0.58 0.5 0.32 0.18 -0.6 -1.98 -1.25 -0.38 -0.32 0.22 0.72 0.85 1.15 -1.21 -0.41 -1.21 0.88 -0.94 -1.3 -1.27 0.49 -1.26 -0.22 -0.52 0.56 0.4
1.26 0.81 0.32 0.21 -1.65 -3.03 -1.5 -1.58 -0.88 0.15 0.95 0.96 1.34 -0.23 -3.79 -1.1 -2.53 0.29 -1.18 -2.31 0.03 -0.96 -1.33 0.93 0.89 0.18
0.68 0.7 -0.48 0.18 -0.41 -2.81 -0.2 0.47 -0.56 0.71 0.93 0.28 1.25 -0.19 -0.34 -0.92 -0.75 -0.53 -0.17 -1.04 -0.47 -4.15 0.41 -0.27 0.17 0.06
0.83 0.27 -0.25 0.16 -0.4 -2.64 -1.36 -1.14 -1.41 -0.16 0.9 1.33 1.5 -2.06 -2.94 -2.21 -1.38 -1.99 -4.13 - 0.58 0.43 -0.59 1.48 1.3 -0.33
0.47 -0.19 -0.48 -0.67 -1.17 -1.65 -1.42 -1.29 -0.54 0.4 0.99 1.53 0.67 -1.15 -1.23 -0.69 -0.13 -0.18 -0.77 -0.33 0.63 0.82 -1.03 0.61 0.41 0.06
0.45 0.37 -0.11 -0.44 -0.65 -0.92 -0.46 -0.44 -0.22 0.0 0.13 0.34 0.4 -0.49 -0.32 0.7 0.01 0.58 0.03 -0.29 -0.29 -0.02 -0.28 0.84 -0.29 -0.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.