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Heatmap: Cluster_180 (HCCA)

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
35.81 32.16 31.64 40.53 46.78 54.32 57.48 55.83 59.76 47.99 48.89 43.48 38.95 48.99 45.75 49.9 38.9 51.65 45.16 38.09 27.16 92.43 86.54 60.7 49.79 46.99
0.97 1.49 1.39 2.41 3.3 3.06 4.57 3.65 4.58 5.08 5.55 4.37 1.36 4.64 2.54 2.91 2.64 2.81 2.83 2.69 0.65 5.77 7.66 4.49 3.7 3.01
0.09 0.07 0.09 0.27 0.3 0.14 0.25 0.19 0.18 0.27 0.34 0.19 0.19 4.49 3.38 3.37 2.67 2.81 2.27 1.87 5.53 5.87 6.74 5.78 4.14 3.67
2.02 2.24 2.76 2.75 2.79 2.17 3.05 2.09 2.93 3.14 3.23 2.78 1.04 6.98 6.48 4.51 5.57 6.34 6.61 4.54 7.22 5.96 8.32 7.32 6.7 6.52
1.25 2.2 1.82 2.73 3.51 2.57 3.95 3.04 4.69 3.82 4.16 3.48 1.48 7.02 4.09 5.19 4.05 5.41 4.95 3.59 0.84 7.64 10.95 7.54 4.19 5.35
5.94 8.56 13.33 15.65 15.88 20.44 23.55 21.44 23.62 15.99 13.43 11.57 7.28 24.19 16.7 25.49 17.5 21.36 17.07 17.74 10.74 35.35 32.23 14.77 24.69 21.71
3.58 4.8 4.52 5.36 5.53 4.68 6.96 6.97 8.2 7.98 8.64 7.34 3.91 7.76 6.4 7.4 5.25 5.75 5.72 4.45 3.95 9.4 12.65 10.26 7.59 6.84
3.72 5.81 7.27 9.38 14.41 16.91 15.77 13.1 15.86 12.12 10.44 9.05 4.5 24.04 16.28 20.88 15.87 17.73 16.32 15.36 9.29 14.58 20.79 18.08 16.99 16.57
5.04 5.52 5.72 6.35 7.52 6.12 7.14 5.73 6.94 8.86 9.54 8.98 5.36 15.86 7.98 13.74 8.28 12.64 10.05 7.67 5.31 14.33 16.81 14.44 9.69 12.78
3.12 6.89 7.19 9.36 9.07 7.59 8.08 8.45 6.71 6.43 6.5 5.98 3.25 12.9 14.1 14.17 11.93 18.55 15.91 9.35 13.77 22.19 31.05 13.91 21.73 14.27
5.15 4.02 3.48 6.08 6.19 4.59 6.43 5.42 6.27 5.1 5.47 4.86 4.06 7.85 9.3 7.96 5.33 10.51 8.85 6.08 14.44 18.2 17.55 16.07 14.27 11.36
0.33 0.21 0.25 0.4 0.4 0.32 0.33 0.2 0.6 0.47 0.42 0.58 0.43 5.12 3.65 5.19 3.45 3.77 2.86 4.14 0.29 0.71 1.72 4.05 4.62 5.12
13.28 9.88 10.63 13.91 15.92 14.11 16.99 17.87 14.64 14.6 15.22 11.16 12.3 26.16 22.31 27.07 20.05 35.08 24.52 18.84 21.89 30.64 39.67 23.93 32.14 26.2
2.62 2.15 2.14 3.87 3.81 3.38 5.16 5.59 6.27 5.51 4.88 3.06 2.08 6.84 4.79 6.95 4.72 8.01 5.61 3.39 6.92 11.27 9.56 7.74 10.3 7.32
4.27 5.55 5.83 7.79 8.99 6.64 9.56 8.17 10.17 7.35 7.6 6.03 3.64 8.94 9.08 8.58 9.48 15.19 15.01 10.69 4.69 16.38 18.19 11.43 10.0 11.52
2.76 3.36 3.05 3.92 5.49 4.74 5.32 5.78 6.76 6.31 6.31 5.19 3.03 6.95 5.29 5.7 4.28 5.55 5.07 3.74 2.0 9.34 11.42 6.57 5.89 5.36
8.69 5.34 23.26 58.45 85.39 100.33 97.29 87.22 154.83 141.16 125.03 90.29 13.09 129.69 100.54 137.78 108.85 127.1 76.02 91.15 73.33 173.04 191.71 164.94 144.85 146.32
2.02 2.02 2.37 2.73 2.71 2.34 3.48 3.53 5.57 5.04 4.85 4.46 2.24 5.94 3.98 5.51 2.31 3.06 2.19 2.33 0.48 5.19 8.27 3.61 3.6 3.36
25.22 28.71 27.99 34.25 36.79 34.79 38.57 35.01 39.17 34.44 36.96 28.0 19.1 31.78 46.1 41.84 38.07 55.43 52.13 37.8 19.53 87.32 93.38 39.79 36.05 33.03
0.68 0.28 0.32 0.18 0.16 0.29 0.86 1.25 1.55 1.32 1.43 0.96 1.22 1.72 1.73 1.21 2.41 3.8 1.82 0.81 2.03 0.76 4.86 4.43 4.77 1.66
0.18 0.39 0.03 0.16 0.29 0.08 0.21 0.02 0.17 0.19 0.22 0.09 0.06 17.34 11.4 13.96 12.52 25.57 20.49 16.0 17.07 17.66 34.44 17.48 26.36 21.51
2.89 4.23 3.93 4.4 5.85 5.31 6.57 5.67 6.09 5.57 5.42 5.45 2.19 8.31 7.2 8.08 6.53 8.28 7.19 5.08 10.24 14.13 13.7 8.99 10.11 7.98
25.32 32.98 27.18 28.96 35.34 41.1 39.72 29.48 42.89 47.95 44.66 44.96 19.86 42.15 44.6 73.4 43.98 50.87 48.62 44.22 9.91 58.24 93.08 74.24 37.88 38.52
4.11 3.36 3.99 4.32 7.02 6.36 7.72 6.06 8.45 8.19 9.29 8.94 4.54 20.9 14.21 25.06 15.51 23.44 19.59 27.29 31.62 45.89 46.01 47.76 23.71 30.56
4.26 5.92 6.18 6.72 6.93 6.3 7.35 7.41 7.68 7.71 8.59 7.97 4.68 7.76 7.86 8.42 6.29 10.2 8.43 6.25 5.89 12.8 13.23 8.53 7.88 9.26
0.98 7.1 10.35 12.31 10.77 9.96 12.4 11.44 11.84 12.04 12.29 9.91 1.51 15.77 17.17 16.25 14.01 15.7 15.12 10.91 10.61 20.49 21.74 15.12 15.95 13.75
0.21 0.28 0.44 0.83 0.97 1.05 0.84 0.65 0.39 0.37 0.49 0.49 0.35 1.52 0.83 1.59 0.97 1.1 1.05 0.93 0.6 1.1 2.68 0.76 0.55 1.3
2.36 2.41 3.04 5.21 5.94 5.19 7.44 6.39 7.88 8.42 8.74 7.31 2.74 10.99 7.17 10.98 6.68 11.68 6.42 6.0 12.74 14.07 15.93 11.87 11.76 10.22
0.35 0.36 0.45 0.89 1.16 1.64 1.04 0.86 1.66 1.58 1.24 0.79 0.37 2.74 3.09 3.04 1.48 3.2 2.62 2.07 3.87 6.3 4.4 2.94 2.51 1.84
83.87 79.13 78.06 82.0 92.14 101.28 75.51 71.77 99.76 111.63 114.63 124.75 97.04 225.21 209.3 285.16 179.76 191.08 195.76 182.33 90.36 217.08 348.04 223.28 202.53 236.25
4.18 2.97 17.14 36.16 51.68 61.44 54.61 41.47 75.07 64.49 55.73 50.71 4.65 55.14 67.96 64.61 61.69 62.23 53.68 67.05 30.77 83.87 91.66 64.74 54.03 74.57
1.98 6.35 10.35 15.91 18.06 16.06 18.47 18.02 20.19 20.49 18.69 15.39 2.49 18.8 26.66 31.32 20.19 27.25 18.02 15.28 10.83 35.45 38.79 23.86 32.25 20.42
11.74 9.54 8.57 8.78 10.08 9.83 9.68 9.81 7.85 9.77 8.53 8.58 10.75 9.23 8.46 11.57 9.16 15.18 10.49 7.21 3.32 5.2 16.3 9.54 15.58 7.65
0.7 4.04 6.44 8.21 7.77 10.35 10.7 8.89 8.04 8.16 7.01 6.5 0.89 17.93 16.78 18.28 12.32 15.89 14.42 9.95 9.01 15.84 21.36 18.53 11.73 12.21
2.56 7.07 8.57 9.88 11.9 12.94 16.24 14.91 21.34 22.68 19.71 15.98 2.67 19.94 24.82 26.33 17.51 30.32 24.8 20.71 29.89 72.28 39.53 50.92 19.64 20.82
1.3 0.99 2.03 2.0 2.55 4.32 3.08 2.75 3.25 3.5 2.61 2.54 0.92 6.14 5.36 14.29 4.26 4.95 7.33 3.41 3.41 8.88 14.5 5.71 6.94 6.36
1.67 0.7 0.84 1.2 1.9 3.33 2.89 1.96 2.58 4.35 4.86 4.49 1.83 25.92 19.62 28.74 14.09 9.09 14.9 13.13 4.25 4.34 9.52 15.32 8.66 13.07
0.93 1.18 1.51 1.7 2.29 2.62 1.57 1.47 1.37 1.34 1.62 1.78 0.85 2.61 1.86 2.57 1.82 1.68 2.12 1.9 1.37 3.19 4.03 2.08 1.68 2.2
10.23 11.55 8.32 9.95 13.58 10.32 13.73 12.48 10.34 11.17 11.18 11.85 10.71 21.19 18.83 19.11 14.92 29.23 17.5 13.99 26.8 38.5 39.7 29.67 31.68 22.91
0.02 0.0 0.04 0.02 0.0 0.0 0.03 0.0 0.0 0.0 0.06 0.02 0.03 1.75 0.58 1.93 1.75 1.23 1.33 1.66 0.23 0.57 0.05 0.84 0.82 1.13
17.25 18.26 18.55 23.3 25.37 19.34 24.08 23.46 23.01 22.35 21.13 17.3 13.85 29.63 32.33 34.18 26.14 36.83 36.44 23.66 19.57 40.75 52.72 32.27 32.27 34.72
1.88 2.76 4.59 5.57 6.98 7.54 8.74 8.57 10.88 9.55 7.67 7.24 2.61 8.99 6.63 10.27 6.13 9.04 5.98 7.12 3.97 13.83 15.55 10.84 10.43 11.18
12.92 8.23 6.09 5.16 6.03 6.36 9.26 10.66 5.99 6.77 6.59 5.86 12.43 10.6 16.43 9.92 10.28 13.88 13.92 7.23 9.38 9.99 15.88 10.05 13.76 12.45
19.86 19.45 13.97 12.93 10.83 10.0 14.74 14.2 17.9 14.86 17.41 12.98 14.11 20.77 16.16 20.58 16.31 20.15 18.33 13.39 5.16 12.61 23.44 17.62 21.49 17.3
37.94 51.44 64.7 71.31 89.74 78.47 67.19 74.81 172.04 156.14 142.19 126.92 51.52 138.28 186.07 179.08 122.91 229.46 147.92 119.31 167.34 226.47 262.52 170.65 169.48 197.32
5.61 6.11 5.75 9.1 14.39 21.1 32.36 27.21 40.24 33.12 26.77 17.89 8.23 32.45 30.24 25.56 17.56 27.03 14.47 15.29 52.74 56.47 65.42 33.94 37.76 32.52
0.0 0.02 0.02 0.05 0.02 0.0 0.0 0.02 0.0 0.02 0.0 0.0 0.0 8.29 4.74 6.25 3.55 4.12 3.82 3.67 1.62 1.77 6.83 6.05 4.0 5.55
16.6 18.43 15.16 12.36 8.58 6.88 7.16 8.9 8.27 8.09 9.75 11.96 18.71 17.49 16.78 18.45 10.87 14.59 16.92 10.11 12.58 7.18 25.38 15.31 10.83 16.41
0.14 0.16 0.1 0.02 0.11 0.0 0.05 0.11 0.09 0.06 0.0 0.05 0.22 0.05 0.02 0.09 0.07 0.4 0.09 0.04 0.1 0.19 0.55 0.38 0.68 0.14
0.46 0.69 0.75 0.9 1.11 1.46 1.37 1.19 1.29 1.45 1.45 1.45 0.51 4.67 3.32 5.48 3.12 3.87 2.48 2.54 0.56 3.2 4.34 4.06 3.74 3.7
19.15 23.13 25.76 28.16 27.96 24.31 28.71 27.57 31.45 32.9 31.78 28.3 18.62 45.9 35.96 63.72 31.78 42.04 32.62 27.78 24.38 44.63 64.19 45.85 45.75 47.35
11.88 15.16 14.01 22.18 27.69 22.15 24.25 23.85 21.06 24.26 26.86 19.14 8.97 19.43 31.93 27.25 23.69 37.58 40.27 25.56 21.2 49.96 69.63 58.4 28.88 31.57
2.17 3.23 4.16 6.16 7.72 10.24 10.64 9.22 13.28 12.62 11.89 10.0 2.67 12.88 8.3 9.33 8.09 10.29 8.62 6.97 5.72 18.04 23.0 12.96 11.37 13.76
1.62 1.65 1.96 2.6 2.67 2.13 4.0 3.94 4.86 5.41 5.62 4.77 1.44 4.57 3.74 4.54 3.47 4.06 3.39 3.41 1.68 6.33 6.41 4.99 4.04 3.3
7.89 6.28 5.12 5.35 3.91 3.29 3.66 3.72 3.84 4.39 4.57 5.02 8.27 8.24 8.06 10.78 9.07 9.42 9.26 4.74 3.5 5.17 11.05 5.73 6.12 6.56
25.6 19.34 20.35 21.8 17.39 10.92 20.79 19.33 22.59 26.03 25.31 22.74 25.06 38.83 28.15 52.79 26.99 43.64 34.38 23.85 9.64 30.19 38.01 23.88 39.02 35.39
7.29 6.37 5.63 6.81 5.51 4.19 7.25 7.24 6.84 6.23 6.72 7.08 6.46 8.44 6.07 6.49 6.65 10.5 5.93 5.82 1.31 3.3 9.63 11.54 9.22 8.91
0.14 0.28 0.33 0.82 0.75 2.17 1.81 1.0 0.81 0.76 0.47 0.35 0.0 2.4 3.31 4.19 2.66 3.23 3.73 4.01 2.12 4.11 5.04 2.41 3.11 2.27
8.95 11.2 10.7 12.5 14.73 14.72 17.65 15.64 16.99 19.71 17.15 16.92 9.15 20.04 13.78 17.44 12.88 17.66 15.38 12.28 7.18 20.73 22.17 20.42 16.35 15.57
6.82 7.32 2.89 3.89 3.24 3.13 2.08 3.15 3.0 4.98 4.06 6.02 4.43 8.39 4.45 10.13 2.66 6.67 4.39 2.79 0.75 5.21 6.37 4.09 5.0 6.22
3.16 3.43 2.43 2.3 2.38 1.65 2.24 2.4 2.5 3.01 3.42 3.06 2.32 6.37 3.97 7.84 2.53 5.44 3.53 2.37 0.92 4.1 6.04 3.66 4.77 3.84
4.02 5.72 8.93 9.33 12.23 12.15 15.52 11.99 15.19 13.42 10.1 10.47 2.0 13.26 13.53 17.08 11.99 16.86 12.5 12.69 7.83 15.72 15.64 15.44 11.1 11.91
7.06 5.49 5.09 4.5 7.31 5.53 6.28 5.22 7.43 11.13 11.93 11.73 6.86 8.94 9.24 10.48 9.98 12.73 16.25 10.53 14.23 21.38 27.78 29.7 10.83 16.08
7.32 7.94 6.21 6.36 5.88 5.49 8.26 6.66 7.47 8.01 7.42 8.66 8.91 10.87 8.58 9.77 9.65 19.37 12.09 8.01 2.85 9.31 11.36 7.37 15.67 11.38
7.59 5.68 6.42 13.05 17.23 16.04 20.55 19.47 20.05 18.66 15.07 10.68 10.42 48.34 32.71 40.6 29.75 42.57 31.15 31.86 17.47 23.98 57.86 28.66 35.26 41.25
1.64 2.35 1.85 2.57 2.55 2.5 3.17 3.77 3.97 4.64 4.62 4.32 2.09 3.36 2.12 2.59 2.15 4.14 2.91 2.45 1.88 5.38 9.37 6.15 4.23 3.4
7.82 11.9 11.75 16.34 19.2 28.33 21.38 18.25 23.14 17.51 17.97 14.55 7.61 49.57 31.36 45.47 29.71 29.17 28.05 27.9 9.3 19.12 26.25 17.83 20.59 23.53
10.22 12.11 10.87 13.02 13.27 10.51 12.23 12.81 15.72 19.74 17.34 16.79 10.33 20.36 18.21 20.02 14.35 26.98 19.24 13.8 19.6 31.72 25.77 27.54 22.48 28.68
6.14 8.94 8.83 8.51 6.0 4.4 6.25 7.18 6.0 7.21 8.32 7.94 7.25 10.44 7.64 11.2 8.44 16.39 12.63 4.45 1.45 3.28 14.29 4.66 13.78 7.45
12.4 14.02 12.91 16.2 15.18 16.46 15.57 13.55 17.93 18.84 20.8 22.36 12.52 36.33 25.8 26.93 27.32 53.25 36.29 20.75 39.68 53.2 66.94 51.52 38.34 40.24
0.23 0.93 1.28 2.82 4.82 5.66 6.89 4.96 6.9 6.24 5.42 2.89 0.31 7.46 5.53 5.93 4.72 5.04 3.73 2.77 3.56 8.11 11.11 9.76 7.61 5.67
0.27 1.06 0.84 1.03 1.25 0.98 1.49 1.32 1.76 1.63 1.59 1.49 0.27 2.32 2.61 2.6 2.18 1.88 2.21 1.91 0.97 2.84 4.93 2.82 2.56 2.97

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)