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Heatmap: Cluster_149 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - -0.41 1.27 - - - - 0.67 - - - - 0.08 4.02 1.57 - -1.72 -0.45 - - - - - -
-0.58 -0.35 -0.1 0.08 0.28 0.48 0.65 0.52 0.54 0.36 -0.08 -0.0 -0.61 -0.35 -0.44 1.18 -0.28 -0.43 -0.48 -0.03 -2.09 -0.5 0.07 0.51 -0.64 -1.04
- - - - - - - - - 0.59 - - - 0.54 1.46 3.95 - 0.17 - - 0.27 - 1.33 - - -
0.04 0.06 0.03 -0.01 0.14 0.34 0.45 0.31 0.12 0.15 -0.07 0.05 0.13 -0.29 -0.57 1.31 -0.49 0.19 0.24 -0.01 -1.73 -0.22 -0.98 -1.04 -0.28 -0.51
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
-2.25 -1.45 -1.7 -2.68 -1.49 -1.05 0.12 0.07 0.84 1.28 1.03 1.2 -2.61 -1.4 -1.6 1.58 -0.8 -0.53 -0.33 -0.11 -3.83 -4.85 0.86 1.0 0.85 -0.26
-0.48 -0.24 -0.06 0.18 0.5 0.1 0.3 0.32 0.22 -0.0 -0.26 -0.39 -0.68 -0.18 0.1 1.58 -1.23 -0.41 0.15 -0.62 -1.25 0.92 -1.45 -0.48 -0.35 -0.08
0.23 -1.34 - -0.84 0.14 0.16 0.78 0.42 -0.32 -1.02 -0.36 -0.23 1.04 1.64 -0.53 1.62 - 0.65 -1.99 - -0.18 0.78 -0.36 - 0.26 -1.46
-0.08 0.04 -0.24 0.17 -0.77 -2.51 -1.36 -0.53 -0.77 0.55 0.91 0.73 0.97 -2.43 -1.89 3.09 0.82 -1.17 -1.73 -2.6 -3.72 -1.97 -2.22 -2.43 -2.5 -2.7
- - - - - - - - - - - - - 2.59 - 4.32 - - - - - - - - - -
-0.46 -2.0 -1.38 -1.84 0.07 0.92 0.91 0.9 0.34 0.42 0.81 0.3 -0.78 0.56 - 2.42 -0.36 -3.22 -3.81 0.04 -3.79 -3.12 -1.37 -0.31 -0.98 -0.35
- -6.82 - - - - - - - - -6.47 - - - -6.49 4.7 -4.76 - - -6.72 -7.34 - - - - -
- - - - -0.07 -1.63 -0.09 -1.51 - - - 1.73 0.94 -2.12 0.96 3.17 -1.56 -0.51 0.34 -0.27 - -0.93 1.26 -0.93 -1.15 -
-0.14 -0.82 -1.38 -2.55 -3.52 -2.09 -0.03 -0.32 -0.45 0.83 0.63 0.11 -0.36 -0.58 -1.42 2.16 0.24 -0.05 0.29 0.37 -4.7 0.14 -0.51 -0.12 0.31 0.82
-0.12 -1.72 -1.58 -1.44 -3.37 -4.56 -0.41 0.61 0.39 1.04 1.37 0.92 -0.17 -1.0 -2.47 1.16 -1.34 -1.06 -1.09 -0.4 -2.58 -2.29 0.43 0.88 1.12 1.11
-0.09 -0.62 -0.52 -0.58 -0.69 -0.81 0.11 0.36 0.64 0.94 1.06 0.7 -0.18 -1.32 -1.72 0.89 -0.81 -0.02 -0.73 -0.07 -3.53 -3.16 0.33 0.91 0.28 0.27
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
0.2 0.24 -0.16 -0.03 -0.11 -0.29 0.42 0.1 0.22 -0.48 -0.32 -0.32 -0.55 -1.14 -0.74 1.97 -1.12 -0.39 0.02 -0.98 -2.85 0.46 -0.91 -0.15 1.01 -0.3
0.25 0.29 -0.15 0.01 0.02 -0.01 0.19 0.29 0.05 -0.13 -0.24 0.09 -0.21 -1.34 -0.78 2.09 -0.78 -0.18 0.38 -0.62 -3.95 0.03 -1.24 -1.04 0.26 -0.44
-0.56 -0.41 -0.19 0.38 0.19 0.75 1.23 0.67 0.91 0.23 0.06 -0.48 -0.84 0.18 -0.89 1.88 -2.01 -0.88 -1.09 -1.04 -2.11 -1.19 -1.05 -1.05 -0.22 -0.56
- - - - 0.76 - 0.58 - - - 1.25 0.1 - - - 3.85 0.77 1.7 - - - - - - - -
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
-1.81 -1.87 -0.16 -1.1 -1.97 -1.62 -0.28 0.68 0.98 1.27 1.53 0.96 -0.61 -0.43 -1.31 1.77 -0.68 -0.27 -0.23 -0.47 -4.76 -2.79 -0.01 -1.11 0.49 -0.82
-0.06 0.03 -0.44 -0.79 -1.46 -1.01 -0.49 -0.09 0.24 1.18 1.08 1.13 0.69 -0.87 -1.5 1.28 -1.55 -0.16 -1.09 -0.15 -2.64 -2.27 -0.83 0.64 0.3 0.25
-2.31 -5.0 -4.54 -3.98 -3.1 -2.73 0.03 1.02 1.15 1.82 1.53 0.58 -1.38 -0.92 -0.22 1.81 -1.2 -1.54 -1.02 -1.58 -4.08 -2.65 0.79 0.28 -0.02 0.23
-2.59 -6.02 -4.77 -4.58 -3.56 -4.3 -0.06 0.97 0.81 1.76 1.46 0.38 -1.42 -0.63 -0.39 2.05 -0.98 -1.01 -0.53 -1.47 -4.42 -2.77 1.08 -0.12 -0.38 0.61
-2.23 -3.46 -2.82 -3.07 -3.45 -2.37 -0.33 0.6 0.81 1.32 1.31 0.74 -0.22 -1.76 -0.5 1.02 -0.81 -0.88 -0.69 -0.56 -7.65 -0.52 1.14 1.62 -0.29 0.45
-4.79 -5.59 -6.17 - -5.27 -3.69 -0.04 0.39 1.36 1.9 2.09 0.63 -3.32 -1.96 -1.11 1.1 -1.46 -3.98 -2.69 -4.83 -4.34 -3.7 0.95 0.68 0.94 1.2
-4.29 -5.61 -4.08 -4.76 -4.41 -3.59 -0.32 0.32 1.28 1.99 1.7 0.15 -3.64 -1.65 -0.61 0.86 -1.34 -3.77 -4.09 -4.6 -4.22 -6.54 1.55 0.26 1.48 1.3
-0.11 -0.06 -0.12 -0.19 0.14 0.5 0.22 0.51 0.28 0.45 -0.13 0.03 -0.25 0.33 -0.67 1.52 -0.94 0.02 0.28 0.02 -3.19 0.61 -1.95 -3.18 -0.9 -0.33
0.1 0.13 0.04 0.05 0.27 0.72 0.44 0.13 0.31 -0.04 -0.39 -0.78 -0.25 0.25 -0.81 1.48 -0.74 -0.36 0.22 -0.06 -3.39 0.7 -1.56 -1.44 -0.15 -0.52
-1.08 -0.57 -0.3 0.18 0.69 0.6 0.64 0.62 0.67 0.81 0.74 0.1 -1.34 -1.64 -1.74 1.72 -0.95 -0.2 -0.22 -0.29 -2.23 -1.2 -1.4 -0.58 -0.34 -0.43
- 2.16 - - - - - - - - - - - - - 4.43 - - - - - - - - - -
-0.6 -0.04 0.13 0.45 0.41 0.35 0.28 0.27 0.4 0.46 0.41 0.16 -0.61 -1.62 -0.63 1.58 -0.32 -0.31 -0.21 -0.21 -2.42 -0.87 -0.71 -0.32 -0.19 -0.39
0.31 -0.8 -1.91 -1.55 -0.7 0.06 0.65 0.55 0.56 0.39 0.01 -0.49 0.14 -0.55 -0.21 1.0 0.18 0.67 0.27 0.28 -3.85 -0.53 0.11 -0.1 0.12 -0.43
- 1.02 - - - - - 2.23 - -0.23 - - -0.22 - -0.2 3.61 1.09 - - 0.8 - - - - -0.73 -
- - - - - 0.91 - - - - - - - 0.31 1.8 3.36 - - 2.43 - 1.92 - - - - -
0.99 - - - - - 1.21 - 1.13 - - 1.09 - 0.84 0.91 3.47 - 0.41 - - - - - - 0.39 -
- - - - - - 0.83 - - - 0.79 0.91 - - - 3.84 - 1.82 - 0.74 - - - - 0.15 -
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
-0.66 0.0 0.23 0.14 0.41 0.28 0.15 -0.02 -0.17 -0.53 -1.09 -1.41 -1.21 -1.98 -0.72 1.36 0.27 1.07 0.74 0.88 -4.24 -0.29 -2.77 -1.55 1.05 -0.12
-1.15 -0.89 -0.52 -0.34 -0.27 -0.63 -1.09 -1.29 -0.53 0.51 0.88 0.83 -0.17 -1.31 0.51 2.38 -0.27 -1.87 -3.25 -2.29 -3.98 0.16 -3.79 0.84 0.7 0.52
1.13 0.09 -0.58 -1.46 -2.19 -1.67 -0.81 0.17 -0.45 0.15 0.29 0.02 0.86 -0.4 -2.02 2.1 -1.92 -0.89 -0.94 -1.03 -1.97 -2.13 1.32 -0.14 0.12 0.59
-1.18 -0.27 -0.25 -0.34 -0.15 -0.4 0.11 -0.54 -0.75 -0.61 -0.45 -0.67 -1.29 -0.09 0.36 2.44 0.33 -0.06 -0.54 -0.67 -1.03 -0.61 -1.19 0.6 0.38 0.08
- - - -1.37 -0.4 -1.44 -1.45 -0.5 0.88 1.04 1.69 -1.36 -1.56 -0.81 -0.7 3.16 -0.24 - - - 0.35 -1.71 0.1 - -0.52 0.34
-0.68 -0.63 -0.77 -0.05 0.43 0.45 0.68 0.55 0.6 0.56 0.16 -0.43 -0.42 0.03 0.19 0.84 0.01 -0.21 -0.15 0.01 -1.71 0.02 -0.62 -0.68 -0.28 -0.65
-5.04 -3.29 -1.52 -0.49 0.51 1.14 1.24 0.98 1.0 0.44 0.07 -0.71 -4.79 -0.77 0.2 1.79 -0.41 -0.05 -0.18 -0.37 -3.26 -1.35 -0.19 -0.95 -0.22 -1.07
-1.46 -1.58 -0.55 -0.77 -0.79 -1.26 -1.16 -0.85 -0.64 0.56 0.73 0.87 -0.99 -1.51 -0.44 3.08 0.49 -0.02 -2.4 -1.07 -3.07 -0.92 -3.64 -1.07 -0.72 0.58
-1.3 -0.75 -0.58 -0.33 -0.32 -0.79 -0.92 -0.81 -0.3 0.79 1.05 1.22 -0.22 -1.77 -0.32 2.46 -0.35 -0.06 -2.7 -1.16 -2.62 0.42 -2.7 -1.28 -0.09 0.38
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
-1.53 -0.62 -0.16 0.35 0.61 0.54 0.88 0.66 0.5 0.01 -0.21 -0.31 -3.15 0.09 -0.09 1.44 0.0 0.31 -0.26 -0.33 -2.81 -0.39 -0.75 -1.58 0.05 -0.41
-1.15 0.32 0.51 0.49 0.34 0.16 0.18 0.49 0.28 0.24 -0.01 -0.42 -1.25 -1.41 -0.44 1.9 -0.18 0.52 0.43 0.38 -6.44 -1.28 -3.32 -2.19 -0.2 -0.8
-0.97 -0.26 0.28 0.35 0.55 0.34 0.1 0.16 0.16 0.11 -0.28 -0.53 -1.01 -1.37 -0.23 1.61 -0.12 0.58 0.57 0.3 -3.8 -0.28 -0.96 -0.96 0.11 -0.72
-2.76 -0.58 -0.15 0.4 0.74 0.8 0.77 0.64 0.55 -0.03 -0.28 -0.4 -3.01 -0.18 -0.3 1.25 -0.4 -0.19 -0.17 -0.63 -2.39 0.38 -0.05 -1.68 0.14 0.01
-3.35 -1.38 -1.37 -0.37 0.61 1.33 1.05 1.04 0.03 -0.24 -0.71 -1.16 -4.19 -0.43 -0.24 1.35 0.03 0.74 0.59 0.4 -3.77 -1.99 -0.36 -0.85 0.23 -0.46
- - - - 2.18 - - - - - - - - - - 4.42 - - - - - - - - - -
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
-3.59 -3.46 -4.36 -2.01 -1.02 0.23 0.78 1.01 1.92 1.25 0.17 -1.06 -3.05 -0.25 -0.5 1.78 0.17 -0.74 -0.57 0.3 -0.6 -4.23 0.61 -0.7 -2.69 -0.71
- - - - - - - - - - - - - - - 4.02 - - - 1.91 2.6 - - - - -
-0.9 -0.01 0.12 0.31 1.02 0.92 0.78 0.43 0.61 0.07 0.47 0.46 -0.79 -1.12 -1.15 1.99 -1.71 -1.26 -2.1 -0.68 -4.84 -3.97 -1.07 -2.62 -0.08 0.14
0.55 -0.31 -0.71 -0.8 -0.98 -0.61 0.15 0.44 0.14 0.37 0.26 0.25 0.44 -0.78 -0.81 1.67 -0.72 0.26 -0.03 -0.21 -2.77 -0.77 0.21 -0.03 0.14 -0.24
- - - - - - - - - - - - - 3.29 - 4.02 - - - - - - - - - -
-0.63 -0.92 -1.0 -0.09 -0.28 -0.61 0.01 0.43 0.38 0.87 0.78 0.39 -0.15 -0.91 -2.0 1.27 -1.51 0.02 -0.78 -1.12 -1.89 -2.55 0.37 1.04 0.91 0.28
-0.04 -0.22 -0.13 0.83 0.16 -0.47 -0.17 0.22 0.17 0.02 0.64 0.22 0.49 -1.07 -1.11 1.03 -0.08 -0.47 -0.92 -1.58 -3.21 -0.61 0.26 0.63 0.44 -0.1
-0.5 -0.55 -0.61 -0.63 -0.64 -0.73 0.03 0.3 0.37 0.64 0.89 0.92 0.15 -0.67 -0.79 1.75 -0.95 -0.2 -0.47 -0.31 -2.67 -0.34 -0.54 -0.21 -0.06 0.22
0.43 -0.36 -0.39 -0.4 0.07 0.23 -0.28 -0.53 -0.72 -0.5 -0.43 -0.35 0.65 0.04 -0.18 1.67 -0.35 0.05 -0.02 -0.19 -3.41 1.26 -1.59 -1.06 0.33 -0.2
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.7 - - - - - - - - - -
- - - - - - - 0.07 - 2.06 - - - 1.69 1.93 3.36 - - - -0.52 - 0.46 - 0.46 - -
-1.28 - -0.74 -1.02 0.08 0.04 0.23 1.07 0.09 -0.04 - 0.12 - - -0.14 2.79 -1.0 1.55 1.2 -0.2 -1.91 - - - -0.0 -1.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.