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Heatmap: Cluster_34 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - -0.58 - - - - - - - - - - - - - - - 4.66 - - -
- - - - - - - 1.81 - - - - - - - - - - - - - - 3.92 - 2.88 -
0.89 -3.01 -3.59 -0.25 0.57 -1.46 -0.19 -1.53 -0.22 -0.48 1.13 0.2 -3.7 -0.79 0.7 -1.36 -1.87 -0.5 0.6 -3.97 -0.52 -0.71 1.81 0.5 1.0 0.71
- - -0.08 - - - 0.64 -1.06 0.0 0.41 0.65 -0.97 - - - - - - -1.16 - -0.75 - 3.92 0.52 -1.76 -0.59
- - -0.45 - - - -0.44 -0.43 1.17 - - - - -1.04 0.45 - - - - - -0.39 - 4.24 - - -
- - - - - - - - - - - - - - 0.85 - - 0.19 - -0.15 0.27 - 4.16 0.35 0.89 -
- - - - 0.87 - - 0.99 - - - - - - - - - - - - - 1.16 4.32 - - -
- - - - - - - 2.06 - - - - - - - - - - - - - 1.65 4.22 - - -
- - -0.33 -2.88 - - 1.64 - - - - -2.84 - -3.12 -1.46 0.11 - -2.62 - 0.13 0.38 - 4.12 - -2.63 -2.38
-0.19 -2.07 -0.84 -1.07 0.47 -2.64 -0.92 -0.73 -0.27 -2.77 -0.71 -1.56 -0.09 -1.01 -0.48 - -0.94 0.35 -2.0 - -0.14 0.04 2.83 1.28 1.37 0.0
- - - - - - - - - - - - - - 0.7 - - - - - 0.84 - 4.34 - 0.11 0.28
-0.23 -0.62 -1.0 0.6 0.1 -1.17 0.33 0.15 0.23 -1.13 -0.41 -0.81 -0.28 0.01 -0.27 -1.16 -1.36 0.24 -0.51 -1.44 -0.01 0.37 1.88 -0.08 1.25 -0.72
- - -0.36 - - -1.45 -1.91 - - -1.44 - - - -1.72 - -0.63 -2.38 -2.9 - -2.73 -1.8 - 3.78 2.41 1.75 -2.93
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - 2.23 - - - - - - - - - - 4.41 - - -
0.76 -1.29 -1.26 -0.08 -0.7 - 0.09 0.12 0.07 -1.22 0.02 -0.34 -0.64 -0.45 -0.84 - -0.89 0.33 -1.57 -2.81 -1.51 -1.8 2.4 0.04 1.64 1.16
- -0.55 - - - - - - - 0.06 -1.43 - -1.54 -2.02 - -1.54 1.46 1.21 -1.79 -1.52 0.75 - 3.71 0.17 -0.3 -0.86
0.49 0.17 -0.43 -1.09 -1.98 -2.16 -1.96 -0.28 -1.12 0.08 -1.18 -1.06 -2.27 -1.76 - - -0.94 - - -0.96 -0.24 -0.93 3.22 1.73 0.42 0.48
-0.54 - -1.4 -1.32 - - -1.39 -0.44 - - -0.46 - - - 0.98 - 0.75 -2.14 0.71 - -2.33 -0.65 3.98 - -2.01 -1.9
- - - - - - - - - - - - - -0.42 - -0.11 - - - - - - 4.6 - - -
-0.4 - - -0.14 - - - - 1.48 -0.14 1.88 1.0 - - - - - - - - -1.08 - 3.86 - - -
- 0.38 - - 0.51 - - - - - - - - - - - - 1.16 - - - - 4.31 - - 0.23
- - - - - - - - - - - - - -1.94 1.68 0.53 - 0.83 -0.42 -1.0 0.56 -2.03 3.77 -1.17 -2.45 1.01
- - - - - - 1.08 - 0.86 - - - - 0.28 - - - 0.33 - - 0.43 - 4.19 - - -
- -0.94 0.39 - - - - 0.42 - - -1.23 - - - -1.28 - - - - - 1.46 - 4.16 -1.29 -1.81 -0.61
- - - 0.37 - - 0.49 - 1.28 - - - - - - - - 0.14 - - -0.15 - 4.15 0.19 - -
-2.16 -1.69 -0.68 -0.19 -3.15 0.84 -1.74 0.03 -0.8 0.36 0.44 0.24 - -1.74 -1.47 -2.87 - 0.44 -0.63 - -0.51 0.65 3.25 -0.93 -1.92 -0.04
-0.08 -0.2 -0.54 -0.13 0.0 -0.95 -0.02 0.21 0.34 0.26 0.32 -0.19 0.37 -0.42 -0.93 -1.31 -0.74 -0.21 -1.2 -0.77 -2.05 0.03 1.52 -0.32 1.25 0.63
-0.37 -0.14 0.37 -0.32 -0.14 -1.26 -1.78 -1.3 -1.34 -1.17 -0.87 -0.8 -0.85 -0.1 -0.6 -0.03 0.77 -0.79 -0.01 -0.75 -0.78 -2.66 2.81 -0.18 0.27 0.51
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
0.63 0.05 -0.38 -0.12 -0.69 -1.08 -0.51 -0.44 -0.52 -0.13 0.28 0.73 0.76 -0.18 -0.36 0.18 -0.37 -0.09 -0.01 -1.06 -1.29 -0.8 1.02 0.29 0.41 0.58
-0.26 - - - 0.31 - - - - - - - - - - - - - - 1.23 1.84 - 3.93 0.21 -1.07 0.19
0.46 0.04 -0.69 0.81 0.37 1.19 0.77 -0.07 -1.67 -1.75 -0.73 1.23 -2.79 - -0.78 -2.7 -2.71 -1.43 -0.77 - -3.62 -2.47 3.08 - -3.36 -0.61
-1.66 - - - -1.61 - -1.79 -0.45 0.01 - - -1.69 -1.9 -1.45 -0.19 -1.91 - -1.15 0.35 -1.02 -2.24 -0.87 3.9 1.02 0.36 -
- - - - - 0.85 - - - - - - - - 1.75 - - - - 0.51 - - 4.28 - - -
- - 1.28 - - - - - - - - - - - - - - - - - - - 4.44 0.95 - -
- - - - - 1.36 - -0.32 -0.16 0.69 -0.24 - - -0.37 - 0.86 - - 1.11 -0.29 0.63 - 3.61 - - -
-2.21 -1.65 - - -2.0 -1.89 - -0.78 -0.84 0.32 0.11 -1.79 0.08 -2.07 - -0.33 -1.67 -1.23 - -1.99 -1.26 -1.22 3.66 -1.3 0.45 1.49
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
-0.73 - 0.26 -0.84 -1.9 0.96 0.31 0.16 0.6 -0.84 0.17 -1.69 - - -1.05 -0.86 - -0.03 -1.87 -2.12 - 1.43 2.58 - 1.66 0.26
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - - - - - - - - - - - - - - - - - - 4.7 - - -
- - - - - 0.69 0.89 - - - - - - - 0.19 - 1.17 -1.15 - - -1.0 -0.96 4.14 - - -
-1.18 -2.3 - -1.8 -0.69 -1.63 - -1.99 -0.89 -0.98 0.11 -1.79 -0.99 - -1.97 -1.99 -1.65 -0.94 -2.23 - -1.82 1.96 3.27 0.72 1.35 0.42
- - - - -0.78 - - - - - - - - - - - - - - - -0.35 0.26 4.55 - - -
- 0.68 - - - - - - - - - - - - - - - - - - - 0.71 4.29 1.71 - -
1.05 0.06 -0.61 -0.35 -0.65 -0.81 -0.23 0.22 0.09 0.14 0.54 0.58 0.73 -0.55 -0.43 -0.24 -0.68 0.02 -0.17 -0.77 -1.59 -0.22 0.54 -0.11 0.46 0.15
0.29 -0.92 -1.57 -0.08 -0.05 -1.98 -3.56 -0.62 -0.56 -0.33 0.57 -0.02 -0.3 -4.16 -1.78 -1.47 - -1.52 -3.93 -1.57 -2.12 0.83 2.19 1.47 1.54 1.36
- - - - - - - - - - - - - - - - - - - - -0.17 0.94 4.04 0.87 1.22 1.35
0.04 - - - 0.24 - - - - - - - - - -0.04 -0.05 0.02 0.31 - - 1.2 1.73 3.81 - - -
0.79 - - 0.52 - - - -0.61 - - - - - - -0.59 - - - - - -1.43 0.7 4.11 - 1.18 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.