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Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 139.0)
Gene families : OG0000874 (Archaeplastida) Phylogenetic Tree(s): OG0000874_tree ,
OG_05_0000126 (LandPlants) Phylogenetic Tree(s): OG_05_0000126_tree ,
OG_06_0000049 (SeedPlants) Phylogenetic Tree(s): OG_06_0000049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_20680 | |
| Cluster | HCCA: Cluster_253 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_01356 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_01470 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_02742 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_03910 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.1 | Archaeplastida | |
| Gb_04010 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_06979 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_07227 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_07329 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_07892 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_08736 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_08813 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
| Gb_10588 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_13579 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.11 | Archaeplastida | |
| Gb_13854 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_14301 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_14528 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_15173 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_17516 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_17834 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_18467 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_19507 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_24254 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.13 | Archaeplastida | |
| Gb_24932 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_26028 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.05 | Archaeplastida | |
| Gb_26729 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_26742 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_27577 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_27820 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_29931 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_30070 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.05 | Archaeplastida | |
| Gb_32236 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_32311 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_33581 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_34670 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.12 | Archaeplastida | |
| Gb_35549 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.1 | Archaeplastida | |
| Gb_35979 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_37844 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_38299 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.09 | Archaeplastida | |
| Gb_38553 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.04 | Archaeplastida | |
| Gb_39701 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_41320 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Neighborhood |
| BP | GO:0006457 | protein folding | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| MF | GO:0015002 | heme-copper terminal oxidase activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |