Heatmap: Cluster_253 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovule, mature
Ovule, pollinated
Strobilus, female
Ovulate strobilus
Microstrobilus
Kernel
Leaf
Leaf, female
Leaf, male
Leaf, salicylic acid
Leaf, seedling
Leaf, truncation control
Leaf, truncation treatment
Leaf, water
Yellow-green stripe leaves
Green leaves
Stem
Cambium
Root
-0.31 -0.22 -0.88 0.16 0.23 0.49 -1.58 -0.12 -0.01 -0.28 0.41 -0.52 -1.49 -1.66 0.27 0.38 0.03 0.51 1.24 0.03
0.31 - - - 1.98 - - -0.56 - 0.08 - - - 0.59 0.88 1.79 - - 1.06 2.07
-1.18 - 2.9 - - - - 0.75 0.53 -1.02 - - - - -0.39 0.34 - - 2.68 -
0.25 0.87 - 1.26 -1.25 0.04 -0.71 0.24 -0.45 -0.54 - - -0.02 0.35 -0.44 1.96 -0.46 - 1.11 -2.59
1.03 - 0.42 - - - -0.45 1.83 -1.09 0.76 - - - - - 0.72 - - 3.09 -
- 2.01 - 2.89 - - -0.85 0.62 - -0.96 - - - -1.65 - - 0.96 - 1.87 -
-0.2 - -0.88 1.34 -0.74 -0.44 -1.38 -0.21 -0.3 -0.21 0.98 - 0.75 0.45 0.85 0.77 -1.4 -1.04 0.17 0.35
1.23 - - -0.24 - - -0.19 0.47 -0.66 - -0.22 -14.68 0.39 0.42 1.78 -2.31 1.45 -0.74 0.44 1.04
-1.65 1.5 0.97 - 0.33 - -1.28 0.91 -2.56 - - -1.54 -1.84 -2.17 -0.75 -0.38 -0.17 0.16 2.43 0.66
-0.48 - -1.14 3.05 - - -1.95 0.01 -2.77 0.03 -1.26 - -1.55 -2.67 -0.31 1.55 -0.67 - 1.49 -
0.07 - - 3.33 - - - 0.8 - 0.22 - - - - 0.85 - - 0.99 1.13 -
- - - - - - - - - - - - - - - - - - - -
- - - 3.39 - - - -3.44 - - - 0.3 1.01 1.79 - - - 1.19 -1.14 -
- 2.3 -9.65 2.85 - - 0.78 0.17 - - - - - - - 1.11 - - 1.52 -
- - - - - - 1.53 2.51 -1.07 2.31 - - 1.25 1.85 - - - - - -
1.18 0.08 -0.4 1.62 -0.92 - - -0.03 -1.41 -0.16 -2.12 - -0.26 -0.13 -0.69 1.2 -0.13 0.78 1.09 -1.36
-0.32 - 1.74 2.43 - - 0.93 0.87 -0.58 - - - - - - 2.46 - - -0.81 -
-1.73 - - 0.82 -2.02 -1.91 - 0.31 0.8 0.16 1.75 -3.42 0.87 1.41 1.52 0.4 -1.75 -3.19 -0.35 -
-1.12 0.56 -0.19 2.71 - - -0.49 -0.73 -2.33 - -2.72 - -1.95 -1.96 -2.85 1.58 1.76 - 0.7 -1.71
- 1.88 - - - - - 1.02 - - - - - - - - 2.31 - 3.23 -14.27
- - - 3.74 - - - 1.04 - - - - - - - - - - 2.2 -
- - - - - - - - - - - - - - - - - - - -
-1.04 0.16 -0.32 3.73 -1.48 - -1.69 -0.45 - - - - - - -0.28 0.09 -1.22 - -0.7 -
-1.28 0.83 - 2.38 1.1 - - -0.15 -1.8 -2.14 - - - - - 1.05 1.52 - 2.04 -
-0.4 1.09 -2.77 2.32 -0.61 -3.44 -0.67 -0.21 -2.56 -0.47 -3.82 -3.93 -1.6 -4.66 -1.88 0.73 0.95 -2.88 2.1 -3.87
0.24 0.93 -1.92 2.67 -2.77 - -0.64 0.08 -1.34 -1.14 -2.81 - -1.09 -3.27 -1.41 -1.26 -0.3 -1.08 2.27 -
- - - - - - - 0.7 4.2 - - - - - - - - - - -
- - 3.33 - - - - 0.87 - - - - - - - - - - 2.47 1.39
- - -0.01 2.1 -3.12 - 0.38 -0.0 0.31 -4.27 0.89 - 0.9 0.53 - 1.87 0.49 - -0.36 -
-0.49 0.95 0.32 3.16 - - 1.27 -0.16 -3.17 - - - -1.73 - - 0.31 0.46 - -0.29 -
- - - - 2.06 - 0.77 0.55 - - - - - - - 2.07 - - 2.32 1.8
- - - - - - - 2.05 - 1.49 - - - - - 3.13 - - 1.12 1.11
- 2.85 - - - - - 1.04 - -13.82 - - - - 1.31 2.28 - -12.84 1.77 -
-0.53 - - 2.87 - - -0.88 0.36 - -2.0 - - -0.34 -1.61 - 2.01 1.44 - 1.03 -
-2.26 -2.74 - 0.39 0.41 1.15 -0.98 0.17 -1.93 -0.99 0.21 0.16 -0.32 -0.46 0.19 -1.61 0.17 2.04 -2.1 0.71
-0.16 0.22 -1.94 2.32 -1.26 - -2.02 -0.57 -1.02 -0.75 -1.38 -4.91 0.51 -0.04 -0.31 1.32 0.86 - 0.38 0.03
- - - - - - - - - - - - - - - - - - - -
0.94 - - 3.04 0.5 - -0.28 -0.12 - - - - - -0.15 - - - - 2.53 -
-1.77 - - 3.6 - - - -1.81 -2.39 - - - - -0.62 - -0.46 - - 2.25 -0.02
1.06 -0.76 -1.92 2.47 -1.76 -0.14 -2.53 0.45 -1.05 0.45 - - 0.39 -0.55 -1.06 0.24 -0.81 - 1.14 -1.01
1.27 - -4.36 1.74 -2.02 -21.83 - 0.1 -0.55 -0.45 - -3.15 0.74 -0.52 0.7 1.46 -0.72 -1.56 1.17 0.51
0.14 - - 2.85 - - 2.0 -1.14 - -0.66 - - -0.13 1.01 - 0.43 0.26 - 0.17 -
0.59 -0.42 -3.44 2.01 -0.21 -2.31 -1.99 -0.17 -0.54 -0.46 -2.43 -4.56 0.18 -0.01 -1.44 1.85 -0.26 -0.26 0.12 -0.11
0.6 -1.84 -0.74 1.07 -0.69 -1.02 -1.06 -0.06 -0.68 -1.59 0.08 -4.5 0.48 -0.36 -0.14 2.22 -0.81 -1.57 0.37 -0.02
- - - - - - - 0.6 - - 2.04 - - - - - - 2.96 2.72 -
- - - 3.87 - 1.19 - 0.64 - - - - - - - - - - 0.63 -
-0.91 - 1.77 - 1.93 - -0.78 0.18 -1.37 -0.78 - -1.71 -1.09 -1.32 1.88 - - 1.32 1.16 -
- - - -8.46 - 1.64 - -0.06 1.1 3.0 - - - - - - - - 2.54 -
0.41 - - - - - - -0.08 - - 1.3 - 1.81 - - 3.09 - - 1.7 -
- - - - - - - - - - - 2.92 - - - 3.64 - - - -
-0.94 1.17 1.34 - - -1.98 -3.17 0.32 -0.25 0.58 1.83 -1.07 -3.49 - 2.01 0.02 -1.2 -1.5 -0.65 -2.61
- - - - - - - 3.69 - - - - - - - - - - 2.83 -
1.12 0.82 -1.93 0.64 0.7 -1.73 -1.59 -0.22 -0.3 -2.74 -1.36 - 0.39 0.91 -1.53 0.79 0.15 -1.12 0.99 -0.07
- - - 0.1 -2.66 - - 0.66 -0.14 0.36 2.48 - 1.52 1.03 0.98 0.43 - -3.11 0.12 -24.83
-0.92 - - 1.9 - - -0.45 2.15 -0.24 - 1.1 - -1.29 - 0.91 0.33 - - 2.01 -
1.79 - - - - - - 0.03 -0.09 0.68 - - - 0.1 -5.05 - 1.99 - 2.98 -
- - - - - - - -1.18 - 2.0 - - - 1.41 2.62 - - 2.76 - -
- 2.36 1.19 2.54 - - - -1.12 - - - - 1.23 - 1.11 - - - 0.83 -
-6.82 - - -0.21 3.04 1.14 -5.57 -0.8 -1.51 -1.47 -4.3 -4.41 -6.09 -2.96 -3.66 -2.04 -1.0 2.41 -1.04 -0.97
-4.01 -2.48 -4.42 1.0 2.48 0.22 -5.98 0.53 0.71 0.65 -1.44 -1.03 -2.53 -0.61 -2.91 -1.17 -0.61 1.4 -0.92 -2.09
-1.98 2.12 0.17 3.46 -1.83 - -2.27 -0.67 - - - - -1.28 - - - -0.95 - 0.29 -
- - - - - - - -2.89 - 2.27 2.03 1.29 0.74 - - 2.77 - - - -
- 4.2 - - - - - - - - - - - - - - - - 0.64 -
- 2.36 0.34 - 3.4 - - 0.48 - - - - - - - -6.79 - 0.68 - -
-1.97 - - 1.43 -0.26 - - 0.83 1.12 -0.48 -0.31 -3.38 -1.54 - 1.32 0.6 -1.15 -1.1 2.43 -
-6.05 - - 1.0 1.31 -0.93 - -1.89 -4.7 -2.88 -5.14 -6.32 -4.6 -5.19 -4.62 -0.06 0.33 2.24 2.73 -0.27
-2.47 1.17 - 1.91 3.14 -1.19 - -1.31 -2.68 - - - - - - - - 1.55 -0.69 -1.2
-5.89 - - 0.59 3.09 1.14 - -0.15 -1.48 -0.98 -3.99 -5.02 -4.55 -4.06 - - - 1.8 0.94 -1.26
1.57 - - - - - - 0.72 -1.38 -0.64 - - - - - 2.97 - - 2.23 0.89
- - - 2.76 1.15 2.25 - -1.79 - - - 0.09 - - - 1.75 - - 0.62 -
- 1.67 - 2.22 - - -0.1 0.5 0.45 - - -1.27 0.74 0.66 0.32 - 1.62 - -1.11 -
- - - - 3.12 - - 0.33 - - - - - - - - - - 3.33 -
4.32 - - - - - - - - - - - - - - - - - - -
-0.03 -0.21 -0.99 -0.04 0.33 0.48 -0.96 0.02 -0.32 -0.57 0.4 -0.53 -0.48 -0.69 0.49 -0.0 -0.15 0.76 0.7 0.06
- 3.65 - - - - - -2.68 - - 2.47 - - - - - - - 0.85 -
0.29 0.55 -1.59 1.41 -0.38 -1.57 -1.01 0.04 -1.12 -1.85 -1.1 -4.58 0.37 -0.55 -0.81 1.89 0.99 -2.31 0.44 -0.61
0.25 - - 2.91 - - 1.44 2.68 - - 1.11 - - - - - - - - -
0.37 - - 3.37 - - - 1.65 - - - -0.45 - - - 2.17 - - - -
0.3 - -1.19 1.37 -1.34 0.59 -1.19 -0.11 0.72 1.44 -0.44 -0.94 -0.09 -1.19 -0.54 1.27 - -1.52 0.78 -1.63
- - - - - - - 4.32 - - - - - - - - - - - -
2.5 - - - - - - -2.78 - - - - - 1.09 3.33 - - - 1.01 -
-3.48 -7.73 -7.06 1.53 2.17 1.95 -7.78 -0.79 -2.0 -2.24 -4.36 -1.77 -2.91 -2.7 -3.55 -0.17 0.89 1.92 -4.74 -1.47
- - - - - - - - - - - - - - - - - - - -
- - - - - 1.03 0.97 0.41 -0.05 - - - -0.4 0.84 0.51 2.93 - - 1.09 -
- 1.33 - - 1.76 2.61 -4.43 -0.42 -1.09 -1.96 -2.81 -1.96 0.33 0.11 -0.88 -1.58 -1.9 -0.88 -3.25 0.95
1.53 1.73 -1.44 2.1 - - -0.14 -0.2 -1.15 -2.18 - - -2.53 - -1.62 0.69 - -0.77 1.99 -
-2.51 -4.53 -4.67 -1.18 1.59 1.59 -0.17 0.1 -0.05 0.57 -1.6 -0.72 -0.03 -0.1 -1.73 -0.35 0.29 1.12 -1.39 0.19
-0.95 - - - - 2.3 1.15 0.63 - - - - 1.32 0.84 2.7 - - - - -
1.73 - - 3.02 - - 0.23 -0.42 -0.31 - 0.98 - - - - - - - 1.07 0.82
- - - - - - - 0.8 - - - - - - - - - - 4.19 -
3.57 - - - - - - 3.03 - - - - - - - - - - -25.0 -
- - - - - - - - - - - - - - - - - - - -
- - 1.02 3.99 - - - -5.97 - - - - - - - 1.02 - - - -
-0.33 -0.15 -1.6 1.98 -1.89 -2.36 -0.65 -0.26 -1.2 -1.27 -1.68 -3.02 -0.46 -0.81 0.18 1.68 1.16 -1.43 0.55 0.14
0.15 -0.77 -0.96 2.02 -0.78 - -10.29 0.57 0.86 -1.41 - - -1.58 -0.91 -0.42 2.09 0.92 -1.21 0.34 -
- - - - - - 4.32 - - - - - - - - - - - - -
4.03 - - - - - - 1.88 - - - - - - - - - - - -
2.47 - - - -12.73 - -17.94 -1.59 -15.13 - -16.84 -18.19 - - - 3.07 - - 2.52 -
0.15 - - - - - - -0.47 0.43 0.27 2.08 - -0.27 - 1.93 1.82 - - 1.69 -
- - - - - - - 0.65 - - 2.94 - - 2.17 2.64 - - - - -
2.08 - 1.04 - - 0.04 0.44 -0.36 1.36 - - - - - - 1.73 - - 1.11 1.32
- - 1.47 - - - -6.69 1.48 -0.22 0.66 - - 2.23 - - - - - 2.31 1.22
- - - 3.83 - - - -0.89 0.99 - - -0.64 - - - - - - 1.4 -
- - - 3.59 -1.21 -1.11 -1.92 1.8 -2.91 -2.11 -0.37 -2.17 - -1.2 - -1.02 - -0.49 -1.59 -
- 2.12 - - 2.35 1.3 - -1.34 -0.63 - 0.94 - - - - - - 0.78 1.77 -
- - - - - - - - - - - - - - - - - - - -
0.03 - - 2.71 - - - -0.57 -1.7 0.18 1.52 -1.95 - - 0.87 - - - 2.42 -
- - - - - 2.91 - -0.93 - - - - - - 1.97 1.25 - - 2.5 -
- - - - - - - 4.32 - - - - - - - - - - - -
- - -2.29 0.27 1.14 - - 0.04 1.95 -18.69 0.69 -0.68 1.82 - - - - -7.69 1.86 1.06
- - - - - - - -2.75 1.03 1.79 - - - 1.21 - 3.3 - - 1.12 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.