Gb_20703

Description : chaperone component ClpC of chloroplast Clp-type protease complex

Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002249 (LandPlants) Phylogenetic Tree(s): OG_05_0002249_tree ,
OG_06_0002384 (SeedPlants) Phylogenetic Tree(s): OG_06_0002384_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20703
Cluster	HCCA: Cluster_65

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00164160	evm_27.TU.AmTr_v1...	External stimuli response.temperature.Hsp...	0.02	Archaeplastida
AT5G50920	HSP93-V, DCA1,...	CLPC homologue 1	0.04	Archaeplastida
Cpa\|evm.model.tig00021365.4	No alias	Chaperone protein ClpB1 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cre11.g467644	No alias	External stimuli response.temperature.Hsp...	0.01	Archaeplastida
Cre43.g760497	No alias	Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana	0.02	Archaeplastida
MA_8117g0010	No alias	ATP-dependent Clp protease ATP-binding subunit ClpA...	0.02	Archaeplastida
Mp1g02560.1	No alias	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	Archaeplastida
Pp3c3_18360V3.1	No alias	CLPC homologue 1	0.02	Archaeplastida
Solyc12g042060.3.1	No alias	chaperone component ClpC of chloroplast Clp-type protease complex	0.05	Archaeplastida
Zm00001e008312_P001	No alias	chaperone component ClpC of chloroplast Clp-type protease complex	0.05	Archaeplastida
Zm00001e040778_P001	No alias	chaperone component ClpC of chloroplast Clp-type protease complex	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Neighborhood
MF	GO:0004366	glycerol-3-phosphate O-acyltransferase activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005244	voltage-gated ion channel activity	IEP	Neighborhood
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Neighborhood
MF	GO:0005253	anion channel activity	IEP	Neighborhood
MF	GO:0005254	chloride channel activity	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006821	chloride transport	IEP	Neighborhood
MF	GO:0008308	voltage-gated anion channel activity	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0008509	anion transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009057	macromolecule catabolic process	IEP	Neighborhood
BP	GO:0015031	protein transport	IEP	Neighborhood
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015833	peptide transport	IEP	Neighborhood
BP	GO:0016052	carbohydrate catabolic process	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016161	beta-amylase activity	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0022607	cellular component assembly	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022832	voltage-gated channel activity	IEP	Neighborhood
MF	GO:0022836	gated channel activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
MF	GO:0022839	ion gated channel activity	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0042886	amide transport	IEP	Neighborhood
BP	GO:0045184	establishment of protein localization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	659	834
IPR003959	ATPase_AAA_core	297	451
IPR004176	Clp_N	106	158
IPR004176	Clp_N	182	233
IPR019489	Clp_ATPase_C	840	918

External Links

No external refs found!

Gb_20703

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation