Gb_20857

Description : 3-ketoacyl-CoA synthase (KCS)

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0000139 (LandPlants) Phylogenetic Tree(s): OG_05_0000139_tree ,
OG_06_0000189 (SeedPlants) Phylogenetic Tree(s): OG_06_0000189_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20857
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268740	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AMTR_s00069p00182480	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
AMTR_s00079p00192440	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AMTR_s00126p00068780	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AT1G01120	KCS1	3-ketoacyl-CoA synthase 1	0.06	Archaeplastida
AT1G04220	KCS2	3-ketoacyl-CoA synthase 2	0.03	Archaeplastida
AT1G07720	KCS3	3-ketoacyl-CoA synthase 3	0.05	Archaeplastida
AT1G19440	KCS4	3-ketoacyl-CoA synthase 4	0.05	Archaeplastida
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.08	Archaeplastida
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.03	Archaeplastida
AT2G16280	KCS9	3-ketoacyl-CoA synthase 9	0.04	Archaeplastida
AT2G46720	HIC, KCS13	3-ketoacyl-CoA synthase 13	0.05	Archaeplastida
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.03	Archaeplastida
AT4G34510	KCS17	3-ketoacyl-CoA synthase 17	0.04	Archaeplastida
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.03	Archaeplastida
GSVIVT01022919001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Gb_06884	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
Gb_06885	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Gb_08308	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Gb_15941	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Gb_17018	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Gb_32625	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os02g49920.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.07	Archaeplastida
LOC_Os03g26530.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os06g14810.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
LOC_Os06g15170.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os10g28060.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os10g33370.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_10426663g0020	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
MA_10429708g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
MA_11217g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_339700g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_415118g0020	No alias	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.05	Archaeplastida
MA_43136g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_45157g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
MA_56709g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_759169g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.1	Archaeplastida
Pp3c8_6790V3.1	No alias	3-ketoacyl-CoA synthase 4	0.02	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
Smo91671	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
Solyc05g009280.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc08g067260.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Solyc09g083050.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e000593_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e002667_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Zm00001e004603_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e014514_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e021255_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e032463_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e033922_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e037353_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Zm00001e038586_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016790	thiolester hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	109	397
IPR013747	ACP_syn_III_C	414	495

External Links

No external refs found!

Gb_20857

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation