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Gb_20875


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 145.0)


Gene families : OG0000959 (Archaeplastida) Phylogenetic Tree(s): OG0000959_tree ,
OG_05_0000587 (LandPlants) Phylogenetic Tree(s): OG_05_0000587_tree ,
OG_06_0012676 (SeedPlants) Phylogenetic Tree(s): OG_06_0012676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20875
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00175460 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.06 Archaeplastida
MA_10436637g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
MA_169053g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
MA_8643g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_92056g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida
Solyc02g062290.2.1 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 542 606
IPR000504 RRM_dom 445 509
IPR000504 RRM_dom 365 433
No external refs found!