Description : Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana (sp|f4iux6|rent2_arath : 100.0)
Gene families : OG0003758 (Archaeplastida) Phylogenetic Tree(s): OG0003758_tree ,
OG_05_0015898 (LandPlants) Phylogenetic Tree(s): OG_05_0015898_tree ,
OG_06_0015664 (SeedPlants) Phylogenetic Tree(s): OG_06_0015664_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_20938 | |
Cluster | HCCA: Cluster_293 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
MA_6584g0010 | No alias | Regulator of nonsense transcripts UPF2 OS=Arabidopsis... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Neighborhood |
BP | GO:0006090 | pyruvate metabolic process | IEP | Neighborhood |
BP | GO:0006096 | glycolytic process | IEP | Neighborhood |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Neighborhood |
BP | GO:0006415 | translational termination | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Neighborhood |
BP | GO:0006757 | ATP generation from ADP | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009166 | nucleotide catabolic process | IEP | Neighborhood |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Neighborhood |
BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
BP | GO:0034404 | nucleobase-containing small molecule biosynthetic process | IEP | Neighborhood |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Neighborhood |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
BP | GO:0042866 | pyruvate biosynthetic process | IEP | Neighborhood |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
BP | GO:0046031 | ADP metabolic process | IEP | Neighborhood |
BP | GO:0046434 | organophosphate catabolic process | IEP | Neighborhood |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0046939 | nucleotide phosphorylation | IEP | Neighborhood |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |