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  5. Gb_21377

Gb_21377


Description : no hits & (original description: none)


Gene families : OG0005865 (Archaeplastida) Phylogenetic Tree(s): OG0005865_tree ,
OG_05_0004544 (LandPlants) Phylogenetic Tree(s): OG_05_0004544_tree ,
OG_06_0005937 (SeedPlants) Phylogenetic Tree(s): OG_06_0005937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21377
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT5G14260 No alias Rubisco methyltransferase family protein 0.03 Archaeplastida
GSVIVT01001828001 No alias No description available 0.03 Archaeplastida
LOC_Os12g13460.1 No alias [Fructose-bisphosphate aldolase]-lysine... 0.03 Archaeplastida
MA_10425789g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_826214g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc02g068050.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020362_P005 No alias [Fructose-bisphosphate aldolase]-lysine... 0.05 Archaeplastida
Zm00001e027953_P005 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR015353 Rubisco_LSMT_subst-bd 380 501
No external refs found!