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  5. Gb_21550

Gb_21550


Description : isoprenyl diphosphate synthase


Gene families : OG0000728 (Archaeplastida) Phylogenetic Tree(s): OG0000728_tree ,
OG_05_0001040 (LandPlants) Phylogenetic Tree(s): OG_05_0001040_tree ,
OG_06_0021503 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21550
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT3G14510 No alias Polyprenyl synthetase family protein 0.03 Archaeplastida
AT3G14530 No alias Terpenoid synthases superfamily protein 0.03 Archaeplastida
AT3G14550 GGPS3 geranylgeranyl pyrophosphate synthase 3 0.04 Archaeplastida
AT3G20160 No alias Terpenoid synthases superfamily protein 0.03 Archaeplastida
AT3G29430 No alias Terpenoid synthases superfamily protein 0.03 Archaeplastida
LOC_Os01g14630.1 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
LOC_Os07g39270.1 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
MA_10268065g0010 No alias Geranylgeranyl pyrophosphate synthase, chloroplastic... 0.04 Archaeplastida
MA_10429253g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
MA_10429756g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_218657g0010 No alias isoprenyl diphosphate synthase 0.02 Archaeplastida
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
MA_888237g0010 No alias isoprenyl diphosphate synthase 0.03 Archaeplastida
Smo133501 No alias Secondary metabolism.terpenoids.methylerythritol... 0.02 Archaeplastida
Solyc04g079960.1.1 No alias catalytic subunit of geranyl diphosphate synthase... 0.02 Archaeplastida
Solyc11g011240.1.1 No alias isoprenyl diphosphate synthase 0.04 Archaeplastida
Zm00001e025596_P001 No alias isoprenyl diphosphate synthase 0.01 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 146 381
No external refs found!