Gb_21889


Description : linker histone (H1)


Gene families : OG0000491 (Archaeplastida) Phylogenetic Tree(s): OG0000491_tree ,
OG_05_0000417 (LandPlants) Phylogenetic Tree(s): OG_05_0000417_tree ,
OG_06_0015709 (SeedPlants) Phylogenetic Tree(s): OG_06_0015709_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21889
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020780.71 No alias No description available 0.02 Archaeplastida
MA_877599g0010 No alias linker histone (H1) 0.05 Archaeplastida
Pp3c18_19330V3.1 No alias winged-helix DNA-binding transcription factor family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0031262 Ndc80 complex IEP Neighborhood
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 60 126
No external refs found!