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  5. Gb_23000

Gb_23000


Description : no hits & (original description: none)


Gene families : OG0000226 (Archaeplastida) Phylogenetic Tree(s): OG0000226_tree ,
OG_05_0000105 (LandPlants) Phylogenetic Tree(s): OG_05_0000105_tree ,
OG_06_0000079 (SeedPlants) Phylogenetic Tree(s): OG_06_0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23000
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00024840 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00069p00101310 evm_27.TU.AmTr_v1... Putative non-specific lipid-transfer protein 14... 0.03 Archaeplastida
AMTR_s00074p00138380 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Pinus taeda 0.03 Archaeplastida
AMTR_s00077p00066810 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.05 Archaeplastida
AMTR_s00077p00067510 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.06 Archaeplastida
AMTR_s00077p00068900 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Helianthus annuus 0.02 Archaeplastida
AMTR_s00077p00070120 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Helianthus annuus 0.03 Archaeplastida
AMTR_s00092p00020690 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein A OS=Ricinus communis 0.02 Archaeplastida
AMTR_s00092p00021420 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein A OS=Ricinus communis 0.03 Archaeplastida
AMTR_s00162p00083730 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.09 Archaeplastida
AT2G38530 LP2, cdf3, LTP2 lipid transfer protein 2 0.03 Archaeplastida
AT2G38540 LTP1, ATLTP1, LP1 lipid transfer protein 1 0.06 Archaeplastida
AT3G08770 LTP6 lipid transfer protein 6 0.03 Archaeplastida
AT3G51590 LTP12 lipid transfer protein 12 0.04 Archaeplastida
AT4G33355 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT5G01870 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
AT5G59310 LTP4 lipid transfer protein 4 0.03 Archaeplastida
AT5G59320 LTP3 lipid transfer protein 3 0.05 Archaeplastida
AT5G59330 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 Archaeplastida
AT5G62065 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 Archaeplastida
GSVIVT01006001001 No alias No description available 0.04 Archaeplastida
GSVIVT01010603001 No alias Putative non-specific lipid-transfer protein 14... 0.03 Archaeplastida
GSVIVT01021772001 No alias Non-specific lipid-transfer protein C,... 0.05 Archaeplastida
GSVIVT01024563001 No alias Non-specific lipid-transfer protein 1 OS=Morus nigra 0.03 Archaeplastida
GSVIVT01030190001 No alias Non-specific lipid-transfer protein P5 OS=Vitis sp. 0.03 Archaeplastida
Gb_02341 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.08 Archaeplastida
Gb_17862 No alias Non-specific lipid-transfer protein 3 OS=Hordeum vulgare... 0.03 Archaeplastida
Gb_41631 No alias Non-specific lipid-transfer protein 3 OS=Hordeum vulgare... 0.07 Archaeplastida
Gb_41632 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g12020.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g40010.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34840.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g02350.1 No alias Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os11g02369.1 No alias Non-specific lipid-transfer protein 2A OS=Oryza sativa... 0.07 Archaeplastida
LOC_Os11g02389.1 No alias Non-specific lipid-transfer protein 1 OS=Oryza sativa... 0.02 Archaeplastida
LOC_Os12g02300.1 No alias Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.04 Archaeplastida
LOC_Os12g02310.1 No alias Non-specific lipid-transfer protein 2B OS=Oryza sativa... 0.03 Archaeplastida
LOC_Os12g02340.1 No alias Probable non-specific lipid-transfer protein 3... 0.02 Archaeplastida
MA_10313526g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10379473g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10432090g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434303g0010 No alias Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.05 Archaeplastida
MA_110959g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_128304g0010 No alias Non-specific lipid-transfer protein 4 OS=Arabidopsis... 0.07 Archaeplastida
MA_13440g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_164786g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_18806g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_209545g0010 No alias Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.03 Archaeplastida
MA_422961g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5482715g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_58978g0010 No alias Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.08 Archaeplastida
MA_6905336g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7418293g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_81028g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8724326g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_9959066g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g081590.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g081600.3.1 No alias Non-specific lipid-transfer protein 2 OS=Lens culinaris... 0.04 Archaeplastida
Solyc02g087910.3.1 No alias Non-specific lipid-transfer protein B OS=Ricinus... 0.05 Archaeplastida
Solyc03g026090.4.1 No alias Putative non-specific lipid-transfer protein 14... 0.04 Archaeplastida
Solyc06g005780.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g005795.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g067510.1.1 No alias no description available(sp|a0a2j6kl39|nltp_lacsa : 101.0) 0.02 Archaeplastida
Solyc08g067540.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc08g067550.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc09g008500.3.1 No alias Non-specific lipid-transfer protein 2 OS=Solanum... 0.05 Archaeplastida
Solyc09g018010.3.1 No alias Non-specific lipid-transfer protein 1 OS=Nicotiana... 0.02 Archaeplastida
Solyc10g039197.2.1 No alias Non-specific lipid-transfer protein B OS=Ricinus... 0.03 Archaeplastida
Solyc10g075060.2.1 No alias Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 Archaeplastida
Solyc10g075070.3.1 No alias Non-specific lipid-transfer protein 1 OS=Solanum... 0.04 Archaeplastida
Solyc10g075090.3.1 No alias Non-specific lipid-transfer protein 2 OS=Solanum... 0.04 Archaeplastida
Solyc10g075100.2.1 No alias Non-specific lipid-transfer protein 2 OS=Solanum... 0.05 Archaeplastida
Solyc10g075103.1.1 No alias Non-specific lipid-transfer protein 2 OS=Solanum... 0.04 Archaeplastida
Solyc10g075107.1.1 No alias Non-specific lipid-transfer protein 2 OS=Solanum... 0.05 Archaeplastida
Solyc10g075110.2.1 No alias Non-specific lipid-transfer protein 1 OS=Solanum... 0.02 Archaeplastida
Solyc10g075118.1.1 No alias Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.03 Archaeplastida
Zm00001e019437_P001 No alias Non-specific lipid-transfer protein 10 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e026064_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037122_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e039316_P001 No alias Non-specific lipid-transfer protein OS=Zea mays... 0.02 Archaeplastida
Zm00001e040319_P005 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 29 103
No external refs found!