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  5. Gb_23172

Gb_23172


Description : component RPL19 of LSU proteome component


Gene families : OG0001902 (Archaeplastida) Phylogenetic Tree(s): OG0001902_tree ,
OG_05_0057547 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0050550 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23172
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AT1G02780 emb2386 Ribosomal protein L19e family protein 0.11 Archaeplastida
AT3G16780 No alias Ribosomal protein L19e family protein 0.04 Archaeplastida
Cpa|evm.model.tig00021181.1 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 Archaeplastida
Cre02.g075700 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
GSVIVT01028052001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
GSVIVT01035096001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.09 Archaeplastida
LOC_Os03g21940.1 No alias component RPL19 of LSU proteome component 0.07 Archaeplastida
LOC_Os03g38260.1 No alias component RPL19 of LSU proteome component 0.05 Archaeplastida
MA_1839g0010 No alias component RPL19 of LSU proteome component 0.08 Archaeplastida
MA_22977g0010 No alias component RPL19 of LSU proteome component 0.1 Archaeplastida
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.11 Archaeplastida
Pp3c15_5130V3.1 No alias Ribosomal protein L19e family protein 0.04 Archaeplastida
Pp3c16_410V3.1 No alias Ribosomal protein L19e family protein 0.12 Archaeplastida
Pp3c18_14440V3.1 No alias Ribosomal protein L19e family protein 0.16 Archaeplastida
Pp3c21_11230V3.1 No alias Ribosomal protein L19e family protein 0.11 Archaeplastida
Pp3c25_8800V3.1 No alias Ribosomal protein L19e family protein 0.06 Archaeplastida
Pp3c9_14720V3.1 No alias Ribosomal protein L19e family protein 0.13 Archaeplastida
Smo179747 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Smo271656 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 Archaeplastida
Solyc06g009210.4.1 No alias component RPL19 of LSU proteome component 0.12 Archaeplastida
Solyc09g075430.3.1 No alias component RPL19 of LSU proteome component 0.14 Archaeplastida
Zm00001e013683_P001 No alias component RPL19 of LSU proteome component 0.05 Archaeplastida
Zm00001e020524_P001 No alias component RPL19 of LSU proteome component 0.06 Archaeplastida
Zm00001e025202_P001 No alias component RPL19 of LSU proteome component 0.12 Archaeplastida
Zm00001e036280_P001 No alias component RPL19 of LSU proteome component 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 228 336
IPR000196 Ribosomal_L19/L19e 4 37
No external refs found!