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  5. Gb_23719

Gb_23719


Description : rhamnogalacturonan-I O-acetyltransferase (TBL)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0001499 (LandPlants) Phylogenetic Tree(s): OG_05_0001499_tree ,
OG_06_0001415 (SeedPlants) Phylogenetic Tree(s): OG_06_0001415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23719
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00012p00251740 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.04 Archaeplastida
AT2G40320 TBL33 TRICHOME BIREFRINGENCE-LIKE 33 0.03 Archaeplastida
AT5G06700 TBR Plant protein of unknown function (DUF828) 0.04 Archaeplastida
GSVIVT01010030001 No alias Protein trichome berefringence-like 7 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01014106001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01029232001 No alias Protein trichome birefringence-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g61460.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os03g18140.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os05g28630.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_2603g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_441100g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_467548g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c6_110V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.03 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc05g005100.4.1 No alias Protein trichome birefringence-like 2 OS=Arabidopsis... 0.02 Archaeplastida
Solyc06g051350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc07g006920.3.1 No alias Protein trichome birefringence-like 5 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g015350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc12g044450.2.1 No alias Protein trichome birefringence-like 42 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e003120_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e030698_P002 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e031480_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Zm00001e038331_P001 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 219 506
IPR025846 PMR5_N_dom 166 218
No external refs found!