AT2G37590 (DOF2.4, ATDOF2.4)


Aliases : DOF2.4, ATDOF2.4

Description : DNA binding with one finger 2.4


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37590
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00264070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00012p00176640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00160p00038440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AT1G47655 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT3G55370 OBP3 OBF-binding protein 3 0.05 Archaeplastida
GSVIVT01005057001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.08 Archaeplastida
GSVIVT01007758001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01016538001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021085001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
Gb_20144 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os01g09720.1 No alias transcription factor (DOF) 0.07 Archaeplastida
LOC_Os02g15350.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g45200.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os02g47810.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g16850.1 No alias transcription factor (DOF) 0.07 Archaeplastida
LOC_Os03g38870.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.05 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os05g02150.1 No alias transcription factor (DOF) 0.06 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.05 Archaeplastida
MA_56828g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
Pp3c6_13355V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c9_4910V3.1 No alias cycling DOF factor 2 0.03 Archaeplastida
Solyc02g077950.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc02g077960.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090220.3.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc02g090310.1.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Solyc03g082840.3.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc04g079570.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g076030.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g150130.1.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e002951_P002 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e005785_P001 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e007228_P002 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e010454_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e011750_P002 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e012437_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e015414_P004 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e015597_P001 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e018163_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e019172_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e023334_P001 No alias transcription factor (DOF) 0.07 Archaeplastida
Zm00001e027634_P002 No alias transcription factor (DOF) 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0010089 xylem development RCA Interproscan
BP GO:0044036 cell wall macromolecule metabolic process RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0001872 (1->3)-beta-D-glucan binding IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0006949 syncytium formation IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007020 microtubule nucleation IEP Neighborhood
BP GO:0007389 pattern specification process IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009828 plant-type cell wall loosening IEP Neighborhood
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009886 post-embryonic animal morphogenesis IEP Neighborhood
BP GO:0009887 animal organ morphogenesis IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010051 xylem and phloem pattern formation IEP Neighborhood
BP GO:0010052 guard cell differentiation IEP Neighborhood
BP GO:0010065 primary meristem tissue development IEP Neighborhood
BP GO:0010067 procambium histogenesis IEP Neighborhood
BP GO:0010073 meristem maintenance IEP Neighborhood
BP GO:0010074 maintenance of meristem identity IEP Neighborhood
BP GO:0010078 maintenance of root meristem identity IEP Neighborhood
BP GO:0010088 phloem development IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010252 auxin homeostasis IEP Neighborhood
BP GO:0010305 leaf vascular tissue pattern formation IEP Neighborhood
BP GO:0010374 stomatal complex development IEP Neighborhood
BP GO:0010479 stele development IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
BP GO:0019827 stem cell population maintenance IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0022622 root system development IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032957 inositol trisphosphate metabolic process IEP Neighborhood
MF GO:0033612 receptor serine/threonine kinase binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046030 inositol trisphosphate phosphatase activity IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0046982 protein heterodimerization activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048016 inositol phosphate-mediated signaling IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048479 style development IEP Neighborhood
BP GO:0048480 stigma development IEP Neighborhood
BP GO:0048507 meristem development IEP Neighborhood
BP GO:0048508 embryonic meristem development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048768 root hair cell tip growth IEP Neighborhood
MF GO:0052745 inositol phosphate phosphatase activity IEP Neighborhood
BP GO:0065001 specification of axis polarity IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0090558 plant epidermis development IEP Neighborhood
BP GO:0090698 post-embryonic plant morphogenesis IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
BP GO:0098727 maintenance of cell number IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 87 143
No external refs found!