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Gb_24382


Description : Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana (sp|q9sex2|ktna1_arath : 231.0)


Gene families : OG0000285 (Archaeplastida) Phylogenetic Tree(s): OG0000285_tree ,
OG_05_0001759 (LandPlants) Phylogenetic Tree(s): OG_05_0001759_tree ,
OG_06_0001702 (SeedPlants) Phylogenetic Tree(s): OG_06_0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24382
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g50750.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.04 Archaeplastida
MA_93384g0010 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida
Mp5g19800.1 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c15_4930V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c9_11120V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
Solyc03g110900.4.1 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 Archaeplastida
Zm00001e011359_P005 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida
Zm00001e021043_P002 No alias ATPase family AAA domain-containing protein FIGL1... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004659 prenyltransferase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008318 protein prenyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0018342 protein prenylation IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
BP GO:0097354 prenylation IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 297 427
No external refs found!