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  5. Gb_24403

Gb_24403


Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 577.5) & Reticuline oxidase OS=Eschscholzia californica (sp|p30986|reto_escca : 434.0)


Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24403
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
AT1G01980 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
AT1G11770 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G26380 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G26390 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G26410 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.06 Archaeplastida
AT1G30710 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G30760 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G34575 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT5G44360 No alias FAD-binding Berberine family protein 0.05 Archaeplastida
AT5G44380 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
GSVIVT01020746001 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01021734001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
GSVIVT01021745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Gb_24404 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os06g35660.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os11g30310.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_10144220g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_10428737g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_162773g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_186285g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_26891g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_5468901g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
MA_613919g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_9511312g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Mp1g25840.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g069690.1.1 No alias Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070070.1.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g070130.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g070150.1.1 No alias Berberine bridge enzyme-like 28 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g070160.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Solyc02g070170.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Solyc02g070180.3.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc06g065060.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc09g072660.4.1 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e021429_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e035611_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e035614_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e042367_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Zm00001e042369_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006013 mannose metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009617 response to bacterium IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042742 defense response to bacterium IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0098542 defense response to other organism IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012951 BBE 441 498
IPR006094 Oxid_FAD_bind_N 57 193
No external refs found!