Gb_24547

Description : TOM endomembrane trafficking associated protein

Gene families : OG0000369 (Archaeplastida) Phylogenetic Tree(s): OG0000369_tree ,
OG_05_0003400 (LandPlants) Phylogenetic Tree(s): OG_05_0003400_tree ,
OG_06_0004543 (SeedPlants) Phylogenetic Tree(s): OG_06_0004543_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_24547
Cluster	HCCA: Cluster_336

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00130p00102230	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.protein...	0.03	Archaeplastida
AT5G63640	No alias	ENTH/VHS/GAT family protein	0.03	Archaeplastida
LOC_Os02g46962.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
LOC_Os05g39760.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
Pp3c23_19630V3.1	No alias	ENTH/VHS/GAT family protein	0.04	Archaeplastida
Smo67275	No alias	Vesicle trafficking.endomembrane trafficking.protein...	0.05	Archaeplastida
Solyc03g097070.3.1	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida
Solyc04g063280.3.1	No alias	TOM endomembrane trafficking associated protein	0.02	Archaeplastida
Zm00001e014210_P001	No alias	TOM endomembrane trafficking associated protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004843	thiol-dependent ubiquitin-specific protease activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0019783	ubiquitin-like protein-specific protease activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
CC	GO:0030014	CCR4-NOT complex	IEP	Neighborhood
MF	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:0101005	ubiquitinyl hydrolase activity	IEP	Neighborhood
MF	GO:1990380	Lys48-specific deubiquitinase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004152	GAT_dom	297	371
IPR002014	VHS_dom	95	229

External Links

No external refs found!