Gb_24728

Description : component RPL31 of LSU proteome component

Gene families : OG0002465 (Archaeplastida) Phylogenetic Tree(s): OG0002465_tree ,
OG_05_0002610 (LandPlants) Phylogenetic Tree(s): OG_05_0002610_tree ,
OG_06_0002770 (SeedPlants) Phylogenetic Tree(s): OG_06_0002770_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_24728
Cluster	HCCA: Cluster_248

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00230660	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AMTR_s00022p00233860	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	Archaeplastida
AT5G56710	No alias	Ribosomal protein L31e family protein	0.08	Archaeplastida
Cpa\|evm.model.tig00020703.20	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	Archaeplastida
Cre12.g489153	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.12	Archaeplastida
GSVIVT01015251001	No alias	60S ribosomal protein L31 OS=Nicotiana glutinosa	0.09	Archaeplastida
GSVIVT01032061001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	Archaeplastida
LOC_Os02g48660.1	No alias	component RPL31 of LSU proteome component	0.11	Archaeplastida
LOC_Os06g21480.1	No alias	component RPL31 of LSU proteome component	0.03	Archaeplastida
MA_14317g0010	No alias	component RPL31 of LSU proteome component	0.07	Archaeplastida
Mp7g18320.1	No alias	component RPL31 of LSU proteome component	0.11	Archaeplastida
Pp3c10_8090V3.1	No alias	Ribosomal protein L31e family protein	0.17	Archaeplastida
Pp3c14_7550V3.1	No alias	Ribosomal protein L31e family protein	0.11	Archaeplastida
Pp3c1_34390V3.1	No alias	Ribosomal protein L31e family protein	0.11	Archaeplastida
Pp3c25_8980V3.1	No alias	Ribosomal protein L31e family protein	0.04	Archaeplastida
Pp3c2_16490V3.1	No alias	Ribosomal protein L31e family protein	0.19	Archaeplastida
Smo268515	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	Archaeplastida
Solyc05g008010.3.1	No alias	component RPL31 of LSU proteome component	0.15	Archaeplastida
Solyc12g008720.2.1	No alias	component RPL31 of LSU proteome component	0.14	Archaeplastida
Zm00001e003520_P001	No alias	component RPL31 of LSU proteome component	0.05	Archaeplastida
Zm00001e023413_P001	No alias	component RPL31 of LSU proteome component	0.13	Archaeplastida
Zm00001e036927_P001	No alias	component RPL31 of LSU proteome component	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0006405	RNA export from nucleus	IEP	Neighborhood
BP	GO:0006406	mRNA export from nucleus	IEP	Neighborhood
BP	GO:0006913	nucleocytoplasmic transport	IEP	Neighborhood
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Neighborhood
BP	GO:0015931	nucleobase-containing compound transport	IEP	Neighborhood
CC	GO:0015934	large ribosomal subunit	IEP	Neighborhood
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Neighborhood
BP	GO:0043248	proteasome assembly	IEP	Neighborhood
CC	GO:0044391	ribosomal subunit	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
BP	GO:0050657	nucleic acid transport	IEP	Neighborhood
BP	GO:0050658	RNA transport	IEP	Neighborhood
BP	GO:0051028	mRNA transport	IEP	Neighborhood
BP	GO:0051168	nuclear export	IEP	Neighborhood
BP	GO:0051169	nuclear transport	IEP	Neighborhood
BP	GO:0051236	establishment of RNA localization	IEP	Neighborhood
BP	GO:0065003	protein-containing complex assembly	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000054	Ribosomal_L31e	11	92

External Links

No external refs found!

Gb_24728

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation