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  5. Gb_25268

Gb_25268


Description : component PININ of RNA quality control Exon Junction complex


Gene families : OG0005056 (Archaeplastida) Phylogenetic Tree(s): OG0005056_tree ,
OG_05_0028097 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026358 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25268
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00035440 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.03 Archaeplastida
Cre09.g387300 No alias RNA processing.RNA quality control Exon Junction complex... 0.02 Archaeplastida
LOC_Os03g49520.1 No alias component PININ of RNA quality control Exon Junction complex 0.08 Archaeplastida
MA_49744g0010 No alias component PININ of RNA quality control Exon Junction complex 0.04 Archaeplastida
MA_503521g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g104560.3.1 No alias component PININ of RNA quality control Exon Junction complex 0.05 Archaeplastida
Zm00001e005379_P001 No alias component PININ of RNA quality control Exon Junction complex 0.04 Archaeplastida
Zm00001e012229_P001 No alias component PININ of RNA quality control Exon Junction complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!