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Gb_25269


Description : component PININ of RNA quality control Exon Junction complex


Gene families : OG0005056 (Archaeplastida) Phylogenetic Tree(s): OG0005056_tree ,
OG_05_0005081 (LandPlants) Phylogenetic Tree(s): OG_05_0005081_tree ,
OG_06_0005233 (SeedPlants) Phylogenetic Tree(s): OG_06_0005233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25269
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00173p00035440 evm_27.TU.AmTr_v1... RNA processing.RNA quality control Exon Junction complex... 0.03 Archaeplastida
Pp3c14_12690V3.1 No alias protein-protein interaction regulator family protein 0.04 Archaeplastida
Solyc01g104560.3.1 No alias component PININ of RNA quality control Exon Junction complex 0.02 Archaeplastida
Zm00001e005379_P001 No alias component PININ of RNA quality control Exon Junction complex 0.04 Archaeplastida
Zm00001e012229_P001 No alias component PININ of RNA quality control Exon Junction complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006786 Pinin_SDK_MemA 24 112
No external refs found!