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Description : phenylalanine ammonia lyase (PAL)
Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0000357 (SeedPlants) Phylogenetic Tree(s): OG_06_0000357_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_25608 | |
| Cluster | HCCA: Cluster_272 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G37040 | ATPAL1, PAL1 | PHE ammonia lyase 1 | 0.03 | Archaeplastida | |
| AT3G10340 | PAL4 | phenylalanine ammonia-lyase 4 | 0.02 | Archaeplastida | |
| AT3G53260 | ATPAL2, PAL2 | phenylalanine ammonia-lyase 2 | 0.08 | Archaeplastida | |
| GSVIVT01025703001 | No alias | Secondary metabolism.phenolics.p-coumaroyl-CoA... | 0.02 | Archaeplastida | |
| MA_123220g0010 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Mp4g14130.1 | No alias | Phenylalanine ammonia-lyase class 1 (Fragment)... | 0.03 | Archaeplastida | |
| Pp3c13_9000V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Pp3c19_13690V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.07 | Archaeplastida | |
| Pp3c1_18830V3.1 | No alias | PHE ammonia lyase 1 | 0.04 | Archaeplastida | |
| Pp3c1_18940V3.1 | No alias | PHE ammonia lyase 1 | 0.06 | Archaeplastida | |
| Pp3c26_2420V3.1 | No alias | phenylalanine ammonia-lyase 2 | 0.03 | Archaeplastida | |
| Pp3c2_30610V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.06 | Archaeplastida | |
| Pp3c2_32410V3.1 | No alias | phenylalanine ammonia-lyase 4 | 0.03 | Archaeplastida | |
| Solyc05g056170.3.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Solyc10g086180.2.1 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e015156_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida | |
| Zm00001e015157_P001 | No alias | phenylalanine ammonia lyase (PAL) | 0.04 | Archaeplastida | |
| Zm00001e023032_P002 | No alias | phenylalanine ammonia lyase (PAL) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0003855 | 3-dehydroquinate dehydratase activity | IEP | Neighborhood |
| MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity | IEP | Neighborhood |
| MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Neighborhood |
| MF | GO:0005215 | transporter activity | IEP | Neighborhood |
| BP | GO:0006082 | organic acid metabolic process | IEP | Neighborhood |
| BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| MF | GO:0008373 | sialyltransferase activity | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| CC | GO:0016021 | integral component of membrane | IEP | Neighborhood |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Neighborhood |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
| MF | GO:0016829 | lyase activity | IEP | Neighborhood |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| MF | GO:0016836 | hydro-lyase activity | IEP | Neighborhood |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Neighborhood |
| MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044281 | small molecule metabolic process | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0070085 | glycosylation | IEP | Neighborhood |
| MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001106 | Aromatic_Lyase | 75 | 552 |
| No external refs found! |