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  5. Gb_26267

Gb_26267


Description : Cytochrome c oxidase subunit 1 OS=Oenothera berteroana (sp|p08743|cox1_oenbe : 81.6)


Gene families : OG0002937 (Archaeplastida) Phylogenetic Tree(s): OG0002937_tree ,
OG_05_0002546 (LandPlants) Phylogenetic Tree(s): OG_05_0002546_tree ,
OG_06_0002273 (SeedPlants) Phylogenetic Tree(s): OG_06_0002273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26267
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
ATMG01360 COX1 cytochrome oxidase 0.09 Archaeplastida
GSVIVT01020676001 No alias Cytochrome c oxidase subunit 1 OS=Glycine max 0.03 Archaeplastida
Gb_06295 No alias Cytochrome c oxidase subunit 1 OS=Raphanus sativus... 0.09 Archaeplastida
Gb_31333 No alias component COX1 of cytochrome c oxidase complex 0.09 Archaeplastida
LOC_Os12g33946.1 No alias component COX1 of cytochrome c oxidase complex 0.06 Archaeplastida
Mp3g05480.1 No alias Cytochrome c oxidase subunit 1 OS=Zea mays... 0.05 Archaeplastida
Pp3c4_28940V3.1 No alias cytochrome oxidase 0.02 Archaeplastida
Pp3c4_28946V3.1 No alias cytochrome oxidase 0.02 Archaeplastida
Solyc00g500186.1.1 No alias component COX1 of cytochrome c oxidase complex 0.07 Archaeplastida
Solyc00g500250.1.1 No alias component COX1 of cytochrome c oxidase complex 0.07 Archaeplastida
Solyc00g500349.1.1 No alias component COX1 of cytochrome c oxidase complex 0.07 Archaeplastida
Solyc07g019510.4.1 No alias component COX1 of cytochrome c oxidase complex 0.05 Archaeplastida
Solyc11g063610.3.1 No alias Cytochrome c oxidase subunit 1 OS=Oenothera berteroana... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!