Gb_26413

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0014199 (SeedPlants) Phylogenetic Tree(s): OG_06_0014199_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_26413
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00015p00229650	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00023p00102530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00045p00128140	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
AMTR_s00077p00103880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G55600	ATWRKY10, MINI3, WRKY10	WRKY DNA-binding protein 10	0.03	Archaeplastida
AT1G64000	WRKY56, ATWRKY56	WRKY DNA-binding protein 56	0.03	Archaeplastida
AT2G03340	WRKY3	WRKY DNA-binding protein 3	0.02	Archaeplastida
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.03	Archaeplastida
AT2G44745	No alias	WRKY family transcription factor	0.03	Archaeplastida
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.03	Archaeplastida
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.02	Archaeplastida
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.03	Archaeplastida
GSVIVT01033195001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
Gb_05024	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os02g16540.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os02g53100.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os03g55080.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
LOC_Os06g44010.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os07g40570.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os10g42850.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os11g02540.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_10428091g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_134559g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_175750g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_76002g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_9394894g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c3_8830V3.1	No alias	WRKY DNA-binding protein 23	0.02	Archaeplastida
Solyc02g071130.4.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc02g072190.4.1	No alias	No annotation	0.04	Archaeplastida
Solyc12g011200.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g056750.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc12g096350.2.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e005732_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e006014_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e008447_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e009708_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e014245_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e025937_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027140_P002	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.02	Archaeplastida
Zm00001e027804_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027911_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e032260_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e036514_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Neighborhood
BP	GO:0006790	sulfur compound metabolic process	IEP	Neighborhood
BP	GO:0008037	cell recognition	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
MF	GO:0030246	carbohydrate binding	IEP	Neighborhood
MF	GO:0030247	polysaccharide binding	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0048544	recognition of pollen	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:2001070	starch binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	168	225

External Links

No external refs found!

Gb_26413

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation