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Gb_26539


Description : component RPS3 of SSU proteome


Gene families : OG0002305 (Archaeplastida) Phylogenetic Tree(s): OG0002305_tree ,
OG_05_0001961 (LandPlants) Phylogenetic Tree(s): OG_05_0001961_tree ,
OG_06_0002250 (SeedPlants) Phylogenetic Tree(s): OG_06_0002250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26539
Cluster HCCA: Cluster_335

Target Alias Description ECC score Gene Family Method Actions
AT2G31610 No alias Ribosomal protein S3 family protein 0.05 Archaeplastida
Cpa|evm.model.tig00021462.41 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
Cre02.g102250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
GSVIVT01015110001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
GSVIVT01016775001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
LOC_Os03g38000.1 No alias component RPS3 of SSU proteome 0.02 Archaeplastida
LOC_Os07g41750.1 No alias component RPS3 of SSU proteome 0.04 Archaeplastida
MA_10436283g0010 No alias component RPS3 of SSU proteome 0.02 Archaeplastida
Mp1g16730.1 No alias component RPS3 of SSU proteome 0.03 Archaeplastida
Pp3c11_22640V3.1 No alias Ribosomal protein S3 family protein 0.06 Archaeplastida
Pp3c5_5330V3.1 No alias Ribosomal protein S3 family protein 0.02 Archaeplastida
Pp3c7_2620V3.1 No alias Ribosomal protein S3 family protein 0.04 Archaeplastida
Pp3c9_12170V3.1 No alias Ribosomal protein S3 family protein 0.04 Archaeplastida
Smo270666 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Zm00001e021687_P001 No alias component RPS3 of SSU proteome 0.03 Archaeplastida
Zm00001e040177_P002 No alias component RPS3 of SSU proteome 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 20 93
IPR001351 Ribosomal_S3_C 106 188
No external refs found!