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  5. Gb_26833

Gb_26833


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26833
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.02 Archaeplastida
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011872001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01027949001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028091001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02020 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10190951g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c11_5410V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c18_340V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!