AT2G40220 (ABI4, SAN5, SIS5,...)


Aliases : ABI4, SAN5, SIS5, ATABI4, SUN6, ISI3, GIN6

Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000007 (SeedPlants) Phylogenetic Tree(s): OG_06_0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40220

Target Alias Description ECC score Gene Family Method Actions
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.04 Archaeplastida
AT1G80580 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.02 Archaeplastida
AT4G27950 CRF4 cytokinin response factor 4 0.06 Archaeplastida
LOC_Os02g32140.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g55380.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g25260.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.01 Archaeplastida
LOC_Os07g12510.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os09g20350.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc02g077840.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g095977.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.02 Archaeplastida
Zm00001e003858_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e007351_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e013096_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020274_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e033965_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e036401_P001 No alias transcription factor (DREB) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity TAS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0005983 starch catabolic process NAS Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0006970 response to osmotic stress IMP Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0009640 photomorphogenesis RCA Interproscan
BP GO:0009737 response to abscisic acid RCA Interproscan
BP GO:0009738 abscisic acid-activated signaling pathway IMP Interproscan
BP GO:0009744 response to sucrose IEP Interproscan
BP GO:0009747 hexokinase-dependent signaling NAS Interproscan
BP GO:0009749 response to glucose IMP Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009845 seed germination RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0009933 meristem structural organization RCA Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
BP GO:0010182 sugar mediated signaling pathway RCA Interproscan
BP GO:0010182 sugar mediated signaling pathway TAS Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0010353 response to trehalose IMP Interproscan
BP GO:0010353 response to trehalose IEP Interproscan
BP GO:0010449 root meristem growth IMP Interproscan
BP GO:0010896 regulation of triglyceride catabolic process IMP Interproscan
BP GO:0016567 protein ubiquitination RCA Interproscan
BP GO:0019915 lipid storage RCA Interproscan
BP GO:0031930 mitochondria-nucleus signaling pathway IDA Interproscan
BP GO:0031930 mitochondria-nucleus signaling pathway IMP Interproscan
BP GO:0032880 regulation of protein localization IDA Interproscan
MF GO:0043565 sequence-specific DNA binding IPI Interproscan
MF GO:0044212 transcription regulatory region DNA binding IDA Interproscan
BP GO:0045893 positive regulation of transcription, DNA-templated IDA Interproscan
BP GO:0048316 seed development IMP Interproscan
BP GO:0048527 lateral root development IMP Interproscan
BP GO:0050826 response to freezing RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 54 103
No external refs found!