AT2G40260

Description : Homeodomain-like superfamily protein

Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000101 (LandPlants) Phylogenetic Tree(s): OG_05_0000101_tree ,
OG_06_0041680 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G40260
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00263730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00044p00042560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
AMTR_s00119p00095480	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
AMTR_s00131p00063460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
AT1G32240	KAN2	Homeodomain-like superfamily protein	0.05	Archaeplastida
AT4G04605	No alias	No description available	0.07	Archaeplastida
AT5G06800	No alias	myb-like HTH transcriptional regulator family protein	0.04	Archaeplastida
AT5G45580	No alias	Homeodomain-like superfamily protein	0.05	Archaeplastida
GSVIVT01000606001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
GSVIVT01013085001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	Archaeplastida
GSVIVT01020827001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	Archaeplastida
GSVIVT01026319001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	Archaeplastida
Gb_08427	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Gb_17469	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Gb_25991	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Gb_25992	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Gb_40510	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
LOC_Os08g33750.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
LOC_Os11g01480.1	No alias	Putative Myb family transcription factor At1g14600...	0.04	Archaeplastida
LOC_Os12g01490.1	No alias	Putative Myb family transcription factor At1g14600...	0.04	Archaeplastida
MA_10432937g0010	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
MA_138039g0010	No alias	G2-like GARP transcription factor	0.05	Archaeplastida
MA_8183372g0010	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
MA_937875g0010	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Pp3c13_9170V3.1	No alias	myb-like HTH transcriptional regulator family protein	0.02	Archaeplastida
Pp3c21_2850V3.1	No alias	Homeodomain-like superfamily protein	0.03	Archaeplastida
Pp3c3_34700V3.1	No alias	myb-like HTH transcriptional regulator family protein	0.02	Archaeplastida
Pp3c8_16910V3.1	No alias	Homeodomain-like superfamily protein	0.04	Archaeplastida
Pp3c8_8720V3.1	No alias	Homeodomain-like superfamily protein	0.02	Archaeplastida
Smo270428	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Smo405704	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Solyc02g080730.2.1	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Solyc02g080740.3.1	No alias	G2-like GARP transcription factor	0.05	Archaeplastida
Solyc03g006150.2.1	No alias	Putative Myb family transcription factor At1g14600...	0.05	Archaeplastida
Solyc05g055940.3.1	No alias	PHR1 transcription factor involved in proline synthesis...	0.04	Archaeplastida
Solyc10g078720.2.1	No alias	G2-like GARP transcription factor	0.05	Archaeplastida
Zm00001e004125_P001	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e005097_P001	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e005797_P001	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Zm00001e007585_P001	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
Zm00001e009294_P001	No alias	Putative Myb family transcription factor At1g14600...	0.03	Archaeplastida
Zm00001e013758_P003	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
Zm00001e030689_P002	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e037731_P001	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Zm00001e037761_P001	No alias	G2-like GARP transcription factor	0.05	Archaeplastida
Zm00001e039024_P001	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
Zm00001e040203_P001	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
Zm00001e041868_P002	No alias	G2-like GARP transcription factor	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005615	extracellular space	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0010075	regulation of meristem growth	IEP	Neighborhood
BP	GO:0010082	regulation of root meristem growth	IEP	Neighborhood
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Neighborhood
BP	GO:0010942	positive regulation of cell death	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016597	amino acid binding	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
BP	GO:0018904	ether metabolic process	IEP	Neighborhood
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Neighborhood
MF	GO:0019825	oxygen binding	IEP	Neighborhood
BP	GO:0030397	membrane disassembly	IEP	Neighborhood
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Neighborhood
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0042349	guiding stereospecific synthesis activity	IEP	Neighborhood
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Neighborhood
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Neighborhood
BP	GO:0071456	cellular response to hypoxia	IEP	Neighborhood
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	Neighborhood
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	Neighborhood
BP	GO:0080142	regulation of salicylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0090447	glycerol-3-phosphate 2-O-acyltransferase activity	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1901503	ether biosynthetic process	IEP	Neighborhood
BP	GO:1901598	(-)-pinoresinol metabolic process	IEP	Neighborhood
BP	GO:1901599	(-)-pinoresinol biosynthetic process	IEP	Neighborhood
BP	GO:1902446	regulation of shade avoidance	IEP	Neighborhood
BP	GO:1902448	positive regulation of shade avoidance	IEP	Neighborhood
MF	GO:1990136	linoleate 9S-lipoxygenase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	85	135

External Links

No external refs found!

AT2G40260

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation